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The map label for this gene is ompW [H]

Identifier: 110834783

GI number: 110834783

Start: 2199089

End: 2199772

Strand: Reverse

Name: ompW [H]

Synonym: ABO_1922

Alternate gene names: 110834783

Gene position: 2199772-2199089 (Counterclockwise)

Preceding gene: 110834785

Following gene: 110834776

Centisome position: 70.5

GC content: 51.02

Gene sequence:

>684_bases
ATGAAACTGCGAGGACCGGGAAAAAACGTATTGCTGCTGTCAACAATGTTGGTGACAGCGCCAGCCATGGCACACCAGTC
AGGTGACTTCATTGTGCGAATGGGTGGCATTAAGGTTGATCCGGATGTGAGTAGCGATAGCTTCAACCCCGCATTGCCTG
CGGTTGGCGGGGTGGGTGTGGATGTGGATGACGATACTCAGCTGGGCCTGACATTCTCTTATATGGTTACAGATAACATC
GGTGTTGAGCTGGTCGGGGCGACACCATTTACCCATGACATCATTTTAGACACGGGGGGCTCAGGTGTTTCGATTGGTGA
GACTAGCCATTTGCCGCCTACGTTACTGGCACAGTTTTATGCTCCTCAGCTAGGTCCTGTGCGCGGCTATCTTGGGGCTG
GCGTGAACTACACGTTATTTTTCGATGACAGCATTGATGACGCGGTGGTGAGTCCATTGGTGGGCGGCGCCGATGTGGAT
GTTAAGCTGAGTAATTCAATCGGGTTTGCTTGGGAAGTCGGGGCGGATGTCATCATTGATGAAAACTGGCTCTTCAATGT
CAGCATCTGGAATATCGATATTGATACCGAAGCACGCCTGTACGTGAACGATGTCCGGGTGGACAAAATCGATGTGGAAA
TTGACCCTTGGGTTTATATGGTCGGTGTGGGCTATCGTTTCTAA

Upstream 100 bases:

>100_bases
AATGTCGTGAGGTCGGAGGTGGCGTTCAATGGGCTCTCCATCGTAAACCATCATTACTGTGGATTTCACAAAGGGCTTGG
TTTTAACAAAGGGGATGAAT

Downstream 100 bases:

>100_bases
AAGCGGTTGGCGTTGCATGTAATACGTTTAATTGATGCAACCACGCGTTGGAAATTAAGTAGTAAAGGAGGGCGGAGAGT
GTAGTGAATAATATCCGCCT

Product: Outer membrane protein W

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 227; Mature: 227

Protein sequence:

>227_residues
MKLRGPGKNVLLLSTMLVTAPAMAHQSGDFIVRMGGIKVDPDVSSDSFNPALPAVGGVGVDVDDDTQLGLTFSYMVTDNI
GVELVGATPFTHDIILDTGGSGVSIGETSHLPPTLLAQFYAPQLGPVRGYLGAGVNYTLFFDDSIDDAVVSPLVGGADVD
VKLSNSIGFAWEVGADVIIDENWLFNVSIWNIDIDTEARLYVNDVRVDKIDVEIDPWVYMVGVGYRF

Sequences:

>Translated_227_residues
MKLRGPGKNVLLLSTMLVTAPAMAHQSGDFIVRMGGIKVDPDVSSDSFNPALPAVGGVGVDVDDDTQLGLTFSYMVTDNI
GVELVGATPFTHDIILDTGGSGVSIGETSHLPPTLLAQFYAPQLGPVRGYLGAGVNYTLFFDDSIDDAVVSPLVGGADVD
VKLSNSIGFAWEVGADVIIDENWLFNVSIWNIDIDTEARLYVNDVRVDKIDVEIDPWVYMVGVGYRF
>Mature_227_residues
MKLRGPGKNVLLLSTMLVTAPAMAHQSGDFIVRMGGIKVDPDVSSDSFNPALPAVGGVGVDVDDDTQLGLTFSYMVTDNI
GVELVGATPFTHDIILDTGGSGVSIGETSHLPPTLLAQFYAPQLGPVRGYLGAGVNYTLFFDDSIDDAVVSPLVGGADVD
VKLSNSIGFAWEVGADVIIDENWLFNVSIWNIDIDTEARLYVNDVRVDKIDVEIDPWVYMVGVGYRF

Specific function: Acts As A Receptor For Colicin S4. [C]

COG id: COG3047

COG function: function code M; Outer membrane protein W

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OmpW/AlkL family [H]

Homologues:

Organism=Escherichia coli, GI1787510, Length=217, Percent_Identity=41.9354838709677, Blast_Score=159, Evalue=2e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011250
- InterPro:   IPR005618 [H]

Pfam domain/function: PF03922 OmpW [H]

EC number: NA

Molecular weight: Translated: 24299; Mature: 24299

Theoretical pI: Translated: 3.87; Mature: 3.87

Prosite motif: PS00695 ENT_VIR_OMP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLRGPGKNVLLLSTMLVTAPAMAHQSGDFIVRMGGIKVDPDVSSDSFNPALPAVGGVGV
CCCCCCCCCEEEEEEHHHHHHHHHCCCCCEEEEECCEEECCCCCCCCCCCCCCCCCCEEC
DVDDDTQLGLTFSYMVTDNIGVELVGATPFTHDIILDTGGSGVSIGETSHLPPTLLAQFY
CCCCCCEECEEEEEEEECCCCEEEEECCCCCEEEEEECCCCCEECCCCCCCCHHHHHHHH
APQLGPVRGYLGAGVNYTLFFDDSIDDAVVSPLVGGADVDVKLSNSIGFAWEVGADVIID
CCCCCCCCHHHCCCCEEEEEECCCCCHHHHHHCCCCCCEEEEECCCCCEEEECCCEEEEE
ENWLFNVSIWNIDIDTEARLYVNDVRVDKIDVEIDPWVYMVGVGYRF
CCEEEEEEEEEEEECCCCEEEEEEEEEEEEEEEECCEEEEEEEEECC
>Mature Secondary Structure
MKLRGPGKNVLLLSTMLVTAPAMAHQSGDFIVRMGGIKVDPDVSSDSFNPALPAVGGVGV
CCCCCCCCCEEEEEEHHHHHHHHHCCCCCEEEEECCEEECCCCCCCCCCCCCCCCCCEEC
DVDDDTQLGLTFSYMVTDNIGVELVGATPFTHDIILDTGGSGVSIGETSHLPPTLLAQFY
CCCCCCEECEEEEEEEECCCCEEEEECCCCCEEEEEECCCCCEECCCCCCCCHHHHHHHH
APQLGPVRGYLGAGVNYTLFFDDSIDDAVVSPLVGGADVDVKLSNSIGFAWEVGADVIID
CCCCCCCCHHHCCCCEEEEEECCCCCHHHHHHCCCCCCEEEEECCCCCEEEECCCEEEEE
ENWLFNVSIWNIDIDTEARLYVNDVRVDKIDVEIDPWVYMVGVGYRF
CCEEEEEEEEEEEECCCCEEEEEEEEEEEEEEEECCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2336399; 10952301 [H]