| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is sglT [H]
Identifier: 110834774
GI number: 110834774
Start: 2189847
End: 2191400
Strand: Direct
Name: sglT [H]
Synonym: ABO_1913
Alternate gene names: 110834774
Gene position: 2189847-2191400 (Clockwise)
Preceding gene: 110834773
Following gene: 110834777
Centisome position: 70.18
GC content: 55.92
Gene sequence:
>1554_bases ATGACTCTGGCAATCGCTGACTGGATTGTCCTTGCTGGGTACCTTTGTATCGTGCTGGGCATCGGTATCTATTTCTCACG CCGCAACACCAATACCGAAGAATATTTTGTAGGCGGTCGCCGTTTTCGCGGCTGGGTAATAGGTCTGTCATTAGTAGGCA CATCCATCAGCTCCATTACCTTCTTGGCCTATCCCGCCGACGCCTTCCTGACCGACTGGTTACGCTACCTACCTAACCTG GCCCTACTGCCTGCCATGCTGGTGGCAGCTTTCGTTTTTTTGCCTTTTTTTCGGCGCGAAAATATGACCAGCGCCTATGA ATTCCTCGAGTTACGCTATGGTCCATCCATCCGAGTATATGGTGCCATTGCGTTTCTGGTGGCGCAGTTGGTGCGCCTAG CCATGATCCTGTGGCTGCTCTCTCTTTTGATACAACAAGTCACCGATCTAACACCCACCACCGCCATTATTCTAGGTGGG TTTTTTGTTGGCTTTTACACCGTCATCGGAGGTATTGATGCGGTAATCTGGACCGATGTGCTGCAAACCGTCATTTTGTT ACTGGGCGGCCTCGTCTGCCTGTGGGTGATTCTCGAGGCGCTGCCCGGCGGGCTCAACCAAGTGTTCGAACAAGCAGGTC AGGCCGGCAAGTTTGCCCTGGCGCCCTGGGAAAACGGTGCTCCCGCAGAGACCTCTTGGTCGTTCTCGCTGAGCGAAAAG ACCGCCACCATGATGCTGTTGATCGGCCTCACCAACTGGCTCACAGAATACTCCAGCAACCAGAACACCGTGCAACGGTA TTGCGCCTCCCAATCCACTAAGGAAGCGCGTCGCGGGCTCTGGGTATACCTATTCACCGCCCTGCCTATCTGGGCGTTCT ACATGCTATTGGGCACGGCCCTGTGGGTGTTCTTTCAGGTTTATCCGGACGCCCAGGCAAGCGCGATTCTGACCGGTGAA ACTCGGGCTGAAACTCTGATGCCCCATTTCATTACCGGCTACCTGCCCGCTGGCGTGGCCGGGCTGGTGATTGCAGCAGC TCTGGCCGCCGCCATGAGCTCACTGGATTCCAGCATCAACTCCATCACTACCGTTAGCGTGGTTGACCTGTATCGCCGTC ATCTGCGTCCTGGCCGCGATGATCGCCACTACCTAAAAGTGGCCTGGGCCATCGCCGCCGCCGTCACGGGAGTCATGATT CTCGGAGCGCTGTGGCTAAATCAGGCTGATACCAAAACACTACAAGACACGTCAACCATCCTAGTGTCACTGCTTGGCGG GGGAATGCTAGGGTTATATTTGCTGGGCTTTTTCAGCAAGAAGGGCAATGCGCGGGCCGCTTGGGTGGGGATTGGTTGCA CCCTGGTATTCACTAGCTGGACCATTCTTACCAACAACCAGCTTTTACCGGAGGCACTAAGCGCCCCCTTTGACCTGTAT TACACCGGACTGATTGGCAATGTGCTGATGTTTCTGGTCGGCTACGTGGTGGCTTTGCTCTGGCCTGCAGCCTCGGTGGC GCCGGTTTCACCCCAGCCCGCTGCCGAGGGCTGA
Upstream 100 bases:
>100_bases GAACAATAAAACAACCTAAGTCGCATCATGCGGCACGCGCAGCAGGCTGCACTCAGCGGCGTGTTGCGCGCCGCCTGTTG CCTGAAGCGGAATAACAATA
Downstream 100 bases:
>100_bases GTCGATGACTGCTGCGCGAGTAGAGCCCTCGCGCTCAGCAGCCGATCGCGTAGCAACCAACCCACCGCCCAACACACCAG CCAAGGGTCCATCAGGTAAT
Product: sodium solute transporter family protein
Products: Na (I) [Cytoplasm]; pantothenate [Cytoplasm] [C]
Alternate protein names: Na(+)/glucose symporter [H]
Number of amino acids: Translated: 517; Mature: 516
Protein sequence:
>517_residues MTLAIADWIVLAGYLCIVLGIGIYFSRRNTNTEEYFVGGRRFRGWVIGLSLVGTSISSITFLAYPADAFLTDWLRYLPNL ALLPAMLVAAFVFLPFFRRENMTSAYEFLELRYGPSIRVYGAIAFLVAQLVRLAMILWLLSLLIQQVTDLTPTTAIILGG FFVGFYTVIGGIDAVIWTDVLQTVILLLGGLVCLWVILEALPGGLNQVFEQAGQAGKFALAPWENGAPAETSWSFSLSEK TATMMLLIGLTNWLTEYSSNQNTVQRYCASQSTKEARRGLWVYLFTALPIWAFYMLLGTALWVFFQVYPDAQASAILTGE TRAETLMPHFITGYLPAGVAGLVIAAALAAAMSSLDSSINSITTVSVVDLYRRHLRPGRDDRHYLKVAWAIAAAVTGVMI LGALWLNQADTKTLQDTSTILVSLLGGGMLGLYLLGFFSKKGNARAAWVGIGCTLVFTSWTILTNNQLLPEALSAPFDLY YTGLIGNVLMFLVGYVVALLWPAASVAPVSPQPAAEG
Sequences:
>Translated_517_residues MTLAIADWIVLAGYLCIVLGIGIYFSRRNTNTEEYFVGGRRFRGWVIGLSLVGTSISSITFLAYPADAFLTDWLRYLPNL ALLPAMLVAAFVFLPFFRRENMTSAYEFLELRYGPSIRVYGAIAFLVAQLVRLAMILWLLSLLIQQVTDLTPTTAIILGG FFVGFYTVIGGIDAVIWTDVLQTVILLLGGLVCLWVILEALPGGLNQVFEQAGQAGKFALAPWENGAPAETSWSFSLSEK TATMMLLIGLTNWLTEYSSNQNTVQRYCASQSTKEARRGLWVYLFTALPIWAFYMLLGTALWVFFQVYPDAQASAILTGE TRAETLMPHFITGYLPAGVAGLVIAAALAAAMSSLDSSINSITTVSVVDLYRRHLRPGRDDRHYLKVAWAIAAAVTGVMI LGALWLNQADTKTLQDTSTILVSLLGGGMLGLYLLGFFSKKGNARAAWVGIGCTLVFTSWTILTNNQLLPEALSAPFDLY YTGLIGNVLMFLVGYVVALLWPAASVAPVSPQPAAEG >Mature_516_residues TLAIADWIVLAGYLCIVLGIGIYFSRRNTNTEEYFVGGRRFRGWVIGLSLVGTSISSITFLAYPADAFLTDWLRYLPNLA LLPAMLVAAFVFLPFFRRENMTSAYEFLELRYGPSIRVYGAIAFLVAQLVRLAMILWLLSLLIQQVTDLTPTTAIILGGF FVGFYTVIGGIDAVIWTDVLQTVILLLGGLVCLWVILEALPGGLNQVFEQAGQAGKFALAPWENGAPAETSWSFSLSEKT ATMMLLIGLTNWLTEYSSNQNTVQRYCASQSTKEARRGLWVYLFTALPIWAFYMLLGTALWVFFQVYPDAQASAILTGET RAETLMPHFITGYLPAGVAGLVIAAALAAAMSSLDSSINSITTVSVVDLYRRHLRPGRDDRHYLKVAWAIAAAVTGVMIL GALWLNQADTKTLQDTSTILVSLLGGGMLGLYLLGFFSKKGNARAAWVGIGCTLVFTSWTILTNNQLLPEALSAPFDLYY TGLIGNVLMFLVGYVVALLWPAASVAPVSPQPAAEG
Specific function: Actively transports glucose into cells by Na(+) cotransport [H]
COG id: COG0591
COG function: function code ER; Na+/proline symporter
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family [H]
Homologues:
Organism=Homo sapiens, GI167466278, Length=467, Percent_Identity=26.338329764454, Blast_Score=162, Evalue=5e-40, Organism=Homo sapiens, GI256985183, Length=468, Percent_Identity=28.2051282051282, Blast_Score=158, Evalue=1e-38, Organism=Homo sapiens, GI157671931, Length=481, Percent_Identity=26.1954261954262, Blast_Score=155, Evalue=9e-38, Organism=Homo sapiens, GI4507035, Length=480, Percent_Identity=28.9583333333333, Blast_Score=155, Evalue=1e-37, Organism=Homo sapiens, GI109659836, Length=486, Percent_Identity=27.3662551440329, Blast_Score=107, Evalue=3e-23, Organism=Homo sapiens, GI109659839, Length=496, Percent_Identity=27.4193548387097, Blast_Score=105, Evalue=1e-22, Organism=Homo sapiens, GI17941285, Length=473, Percent_Identity=27.061310782241, Blast_Score=97, Evalue=4e-20, Organism=Homo sapiens, GI4507033, Length=411, Percent_Identity=25.7907542579075, Blast_Score=88, Evalue=2e-17, Organism=Homo sapiens, GI206597483, Length=453, Percent_Identity=25.3863134657837, Blast_Score=82, Evalue=1e-15, Organism=Homo sapiens, GI110835708, Length=500, Percent_Identity=23.6, Blast_Score=78, Evalue=2e-14, Organism=Homo sapiens, GI4507031, Length=464, Percent_Identity=23.2758620689655, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI14140236, Length=474, Percent_Identity=22.1518987341772, Blast_Score=74, Evalue=4e-13, Organism=Escherichia coli, GI87082237, Length=377, Percent_Identity=25.1989389920424, Blast_Score=82, Evalue=1e-16, Organism=Escherichia coli, GI1790113, Length=485, Percent_Identity=23.7113402061856, Blast_Score=81, Evalue=1e-16, Organism=Escherichia coli, GI1790503, Length=413, Percent_Identity=24.455205811138, Blast_Score=68, Evalue=2e-12, Organism=Caenorhabditis elegans, GI32566512, Length=385, Percent_Identity=25.7142857142857, Blast_Score=106, Evalue=3e-23, Organism=Caenorhabditis elegans, GI115533094, Length=471, Percent_Identity=24.8407643312102, Blast_Score=104, Evalue=1e-22, Organism=Drosophila melanogaster, GI24651741, Length=492, Percent_Identity=28.6585365853659, Blast_Score=165, Evalue=9e-41, Organism=Drosophila melanogaster, GI24651739, Length=478, Percent_Identity=28.6610878661088, Blast_Score=160, Evalue=3e-39, Organism=Drosophila melanogaster, GI24640370, Length=497, Percent_Identity=27.364185110664, Blast_Score=147, Evalue=2e-35, Organism=Drosophila melanogaster, GI24645928, Length=379, Percent_Identity=28.4960422163588, Blast_Score=144, Evalue=2e-34, Organism=Drosophila melanogaster, GI28573698, Length=472, Percent_Identity=25.635593220339, Blast_Score=138, Evalue=7e-33, Organism=Drosophila melanogaster, GI221459586, Length=494, Percent_Identity=25.9109311740891, Blast_Score=137, Evalue=2e-32, Organism=Drosophila melanogaster, GI281362918, Length=498, Percent_Identity=26.5060240963855, Blast_Score=136, Evalue=5e-32, Organism=Drosophila melanogaster, GI221459588, Length=489, Percent_Identity=24.5398773006135, Blast_Score=135, Evalue=6e-32, Organism=Drosophila melanogaster, GI221459584, Length=493, Percent_Identity=24.3407707910751, Blast_Score=131, Evalue=1e-30, Organism=Drosophila melanogaster, GI24650192, Length=467, Percent_Identity=27.6231263383298, Blast_Score=131, Evalue=1e-30, Organism=Drosophila melanogaster, GI24641117, Length=479, Percent_Identity=26.7223382045929, Blast_Score=125, Evalue=5e-29, Organism=Drosophila melanogaster, GI28574994, Length=463, Percent_Identity=25.2699784017279, Blast_Score=124, Evalue=2e-28, Organism=Drosophila melanogaster, GI19920916, Length=480, Percent_Identity=23.9583333333333, Blast_Score=119, Evalue=4e-27, Organism=Drosophila melanogaster, GI221459582, Length=498, Percent_Identity=25.9036144578313, Blast_Score=112, Evalue=6e-25, Organism=Drosophila melanogaster, GI221379702, Length=402, Percent_Identity=26.3681592039801, Blast_Score=108, Evalue=8e-24, Organism=Drosophila melanogaster, GI281364280, Length=435, Percent_Identity=24.1379310344828, Blast_Score=100, Evalue=4e-21, Organism=Drosophila melanogaster, GI161076631, Length=495, Percent_Identity=23.4343434343434, Blast_Score=99, Evalue=6e-21, Organism=Drosophila melanogaster, GI281362054, Length=446, Percent_Identity=22.4215246636771, Blast_Score=93, Evalue=4e-19, Organism=Drosophila melanogaster, GI281362052, Length=446, Percent_Identity=22.4215246636771, Blast_Score=93, Evalue=4e-19, Organism=Drosophila melanogaster, GI281362050, Length=446, Percent_Identity=22.4215246636771, Blast_Score=93, Evalue=4e-19, Organism=Drosophila melanogaster, GI24648056, Length=446, Percent_Identity=22.4215246636771, Blast_Score=93, Evalue=4e-19, Organism=Drosophila melanogaster, GI21356827, Length=446, Percent_Identity=22.4215246636771, Blast_Score=93, Evalue=4e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001734 - InterPro: IPR018212 - InterPro: IPR019900 [H]
Pfam domain/function: PF00474 SSF [H]
EC number: NA
Molecular weight: Translated: 56398; Mature: 56266
Theoretical pI: Translated: 6.28; Mature: 6.28
Prosite motif: PS50283 NA_SOLUT_SYMP_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLAIADWIVLAGYLCIVLGIGIYFSRRNTNTEEYFVGGRRFRGWVIGLSLVGTSISSIT CCEEHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHCCCCCCHHHHEEHHHHHHCCHHHHE FLAYPADAFLTDWLRYLPNLALLPAMLVAAFVFLPFFRRENMTSAYEFLELRYGPSIRVY EEEECHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHH GAIAFLVAQLVRLAMILWLLSLLIQQVTDLTPTTAIILGGFFVGFYTVIGGIDAVIWTDV HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LQTVILLLGGLVCLWVILEALPGGLNQVFEQAGQAGKFALAPWENGAPAETSWSFSLSEK HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCEEECCCCCCCCCCCCCEEEECHH TATMMLLIGLTNWLTEYSSNQNTVQRYCASQSTKEARRGLWVYLFTALPIWAFYMLLGTA HHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHH LWVFFQVYPDAQASAILTGETRAETLMPHFITGYLPAGVAGLVIAAALAAAMSSLDSSIN HHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SITTVSVVDLYRRHLRPGRDDRHYLKVAWAIAAAVTGVMILGALWLNQADTKTLQDTSTI HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH LVSLLGGGMLGLYLLGFFSKKGNARAAWVGIGCTLVFTSWTILTNNQLLPEALSAPFDLY HHHHHCCHHHHHHHHHHHCCCCCCEEEEEEHHHEEHHHHEEEEECCCCCHHHHCCCHHHH YTGLIGNVLMFLVGYVVALLWPAASVAPVSPQPAAEG HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure TLAIADWIVLAGYLCIVLGIGIYFSRRNTNTEEYFVGGRRFRGWVIGLSLVGTSISSIT CEEHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHCCCCCCHHHHEEHHHHHHCCHHHHE FLAYPADAFLTDWLRYLPNLALLPAMLVAAFVFLPFFRRENMTSAYEFLELRYGPSIRVY EEEECHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHH GAIAFLVAQLVRLAMILWLLSLLIQQVTDLTPTTAIILGGFFVGFYTVIGGIDAVIWTDV HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LQTVILLLGGLVCLWVILEALPGGLNQVFEQAGQAGKFALAPWENGAPAETSWSFSLSEK HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCEEECCCCCCCCCCCCCEEEECHH TATMMLLIGLTNWLTEYSSNQNTVQRYCASQSTKEARRGLWVYLFTALPIWAFYMLLGTA HHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHH LWVFFQVYPDAQASAILTGETRAETLMPHFITGYLPAGVAGLVIAAALAAAMSSLDSSIN HHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SITTVSVVDLYRRHLRPGRDDRHYLKVAWAIAAAVTGVMILGALWLNQADTKTLQDTSTI HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH LVSLLGGGMLGLYLLGFFSKKGNARAAWVGIGCTLVFTSWTILTNNQLLPEALSAPFDLY HHHHHCCHHHHHHHHHHHCCCCCCEEEEEEHHHEEHHHHEEEEECCCCCHHHHCCCHHHH YTGLIGNVLMFLVGYVVALLWPAASVAPVSPQPAAEG HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Na (I) [Periplasm]; pantothenate [Periplasm] [C]
Specific reaction: Na (I) [Periplasm] + pantothenate [Periplasm] = Na (I) [Cytoplasm] + pantothenate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8652595; 10835424; 10757971 [H]