| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is 110834762
Identifier: 110834762
GI number: 110834762
Start: 2179254
End: 2179592
Strand: Direct
Name: 110834762
Synonym: ABO_1901
Alternate gene names: NA
Gene position: 2179254-2179592 (Clockwise)
Preceding gene: 110834757
Following gene: 110834764
Centisome position: 69.84
GC content: 49.85
Gene sequence:
>339_bases ATGCCCAAACGACGACCCATCTACCGCGTCATATTCCAGAGCCAAGCACAAACCTACGAAATTTATGCCTCAGAGATATA CCAAAGCGACCTGCATGGCTTTATCGAGGTGGAGGAGTTTCTGTTCGATGAGCGCAGCGGTGTAGTGGTCGATCCATCGG AAGAAAAGCTTAAGAGCGAATTTTCAGGGGTTTTGCGGTCATACATCCCCATGCATACGGTGATCCGTATTGATGAAGTA GAAAAAGAAGGCGTAGGCAAAATCACCGAATCACGCGGTGAAGCGCGTAGCAACAACGTTTCCCCGTTCCCCATGCCTCC TAGCCCATCCAAAGACTGA
Upstream 100 bases:
>100_bases AGCCGAAAGGTCGGGTTTATCAAGCCCTTCAAGCAGGTACGAAAGTCGCACTCTATGCTACACTTCGGCTCTATTTTCCT AGTTAGCGTCTCTTTCTACC
Downstream 100 bases:
>100_bases GTCCAGCACCTACACCCGGAGAAAAACACAGTCCCCCTTAAAAAAGAAGGGCGCCGGCTTGACCGAGCGCCCCGAGGGTT GCCTGATATTACTTAAGAGG
Product: hypothetical protein
Products: NA
Alternate protein names: Protein Conserved In Bacteria
Number of amino acids: Translated: 112; Mature: 111
Protein sequence:
>112_residues MPKRRPIYRVIFQSQAQTYEIYASEIYQSDLHGFIEVEEFLFDERSGVVVDPSEEKLKSEFSGVLRSYIPMHTVIRIDEV EKEGVGKITESRGEARSNNVSPFPMPPSPSKD
Sequences:
>Translated_112_residues MPKRRPIYRVIFQSQAQTYEIYASEIYQSDLHGFIEVEEFLFDERSGVVVDPSEEKLKSEFSGVLRSYIPMHTVIRIDEV EKEGVGKITESRGEARSNNVSPFPMPPSPSKD >Mature_111_residues PKRRPIYRVIFQSQAQTYEIYASEIYQSDLHGFIEVEEFLFDERSGVVVDPSEEKLKSEFSGVLRSYIPMHTVIRIDEVE KEGVGKITESRGEARSNNVSPFPMPPSPSKD
Specific function: Unknown
COG id: COG4517
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12855; Mature: 12723
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKRRPIYRVIFQSQAQTYEIYASEIYQSDLHGFIEVEEFLFDERSGVVVDPSEEKLKSE CCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHH FSGVLRSYIPMHTVIRIDEVEKEGVGKITESRGEARSNNVSPFPMPPSPSKD HHHHHHHHCCHHHEEEHHHHCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PKRRPIYRVIFQSQAQTYEIYASEIYQSDLHGFIEVEEFLFDERSGVVVDPSEEKLKSE CCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHH FSGVLRSYIPMHTVIRIDEVEKEGVGKITESRGEARSNNVSPFPMPPSPSKD HHHHHHHHCCHHHEEEHHHHCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA