Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

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The map label for this gene is 110834764

Identifier: 110834764

GI number: 110834764

Start: 2180657

End: 2181409

Strand: Direct

Name: 110834764

Synonym: ABO_1903

Alternate gene names: NA

Gene position: 2180657-2181409 (Clockwise)

Preceding gene: 110834762

Following gene: 110834765

Centisome position: 69.89

GC content: 56.97

Gene sequence:

>753_bases
ATGCCTCATTCTTACCGCCGCGCACCTTGGGTCGCACTCATAGCGACCCTTATTGTGGCCGCAAGCTGCTTGCGACTGGC
CTTTTGGCAGCTGGAACGCGCTGAAGAAAAACGCCTGTGGCTAACAGAACAGAACGAACGGGCCACCCTACCACCCGCCG
ACCTGCCCACCCTGCTAGCTGATACTGACCCTATGCACCGTCGCATCACTATCACCGGTCACTTCGACAACGCCCACAAC
GTGCTCCTAGATAACCGTACCCTCAACGGCGTGGCCGGTTATCACCTGTTGACTCCTTTTGAAACCCGAGAGGGCCGCTG
GGTATTAATTAACCGGGGTTGGCTAGCGAGAGGAAACGACCGCGCCACACTACCAACGATCGTCCCCATTGAGGGAAACC
AAACCGTCCACGGAACGGCTTATCGCCCCTCCCGGGACGTTTTTGTGCTCAAGGACATGCCATTGCCCAACAATCAGTGG
CCATTGCGCGTACAAAAAGTGGATTTTGACGCTATTGGAGAACGACTTGGGGTAGAATTACCGCCCTTTGAAATCCGGGT
TACTCCGGAACTGGCGCTGGGCAACAATGTACCACTGCCCCGGCACTGGCAGGACGTGACCGTAATGGGCCCGGAACGAC
ACAAGGCCTATGCGCTGCAATGGTTCGCACTGGCGCTGGCCGCTCTGCTGATATATGTTGCCGCCGCACTCCGAAACAGG
CGTAAAGCACGCAAGACGCGAGAGGAATTGTAA

Upstream 100 bases:

>100_bases
CCTAGCCTGACTGTGCACACACTATCGACAAAGCAAGGCGACAACATAAAACAGCAATCCCCGTTTCGCCGCGCTACTGC
TGTCACGAGGGCAGACAACC

Downstream 100 bases:

>100_bases
TGTCTCCACGGACCAAGAACATTGCCACCCTAGCGGCAATCATTGCTCCTTTTATCCTGTTTTTTTTGGCCGGACGCTTT
CTGATAAACCCCGCGGAGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 249

Protein sequence:

>250_residues
MPHSYRRAPWVALIATLIVAASCLRLAFWQLERAEEKRLWLTEQNERATLPPADLPTLLADTDPMHRRITITGHFDNAHN
VLLDNRTLNGVAGYHLLTPFETREGRWVLINRGWLARGNDRATLPTIVPIEGNQTVHGTAYRPSRDVFVLKDMPLPNNQW
PLRVQKVDFDAIGERLGVELPPFEIRVTPELALGNNVPLPRHWQDVTVMGPERHKAYALQWFALALAALLIYVAAALRNR
RKARKTREEL

Sequences:

>Translated_250_residues
MPHSYRRAPWVALIATLIVAASCLRLAFWQLERAEEKRLWLTEQNERATLPPADLPTLLADTDPMHRRITITGHFDNAHN
VLLDNRTLNGVAGYHLLTPFETREGRWVLINRGWLARGNDRATLPTIVPIEGNQTVHGTAYRPSRDVFVLKDMPLPNNQW
PLRVQKVDFDAIGERLGVELPPFEIRVTPELALGNNVPLPRHWQDVTVMGPERHKAYALQWFALALAALLIYVAAALRNR
RKARKTREEL
>Mature_249_residues
PHSYRRAPWVALIATLIVAASCLRLAFWQLERAEEKRLWLTEQNERATLPPADLPTLLADTDPMHRRITITGHFDNAHNV
LLDNRTLNGVAGYHLLTPFETREGRWVLINRGWLARGNDRATLPTIVPIEGNQTVHGTAYRPSRDVFVLKDMPLPNNQWP
LRVQKVDFDAIGERLGVELPPFEIRVTPELALGNNVPLPRHWQDVTVMGPERHKAYALQWFALALAALLIYVAAALRNRR
KARKTREEL

Specific function: Unknown

COG id: COG3346

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SURF1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002994 [H]

Pfam domain/function: PF02104 SURF1 [H]

EC number: NA

Molecular weight: Translated: 28585; Mature: 28454

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00014 ER_TARGET ; PS50895 SURF1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPHSYRRAPWVALIATLIVAASCLRLAFWQLERAEEKRLWLTEQNERATLPPADLPTLLA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCHHHC
DTDPMHRRITITGHFDNAHNVLLDNRTLNGVAGYHLLTPFETREGRWVLINRGWLARGND
CCCCCCEEEEEEEECCCCCEEEEECCCCCCCCCEEEECCEECCCCCEEEEECCEEECCCC
RATLPTIVPIEGNQTVHGTAYRPSRDVFVLKDMPLPNNQWPLRVQKVDFDAIGERLGVEL
CCCCCEEEEECCCCEEEECEECCCCCEEEEECCCCCCCCCCEEEEEECHHHHHHHHCCCC
PPFEIRVTPELALGNNVPLPRHWQDVTVMGPERHKAYALQWFALALAALLIYVAAALRNR
CCEEEEECCCEECCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
RKARKTREEL
HHHHHHHHCC
>Mature Secondary Structure 
PHSYRRAPWVALIATLIVAASCLRLAFWQLERAEEKRLWLTEQNERATLPPADLPTLLA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCHHHC
DTDPMHRRITITGHFDNAHNVLLDNRTLNGVAGYHLLTPFETREGRWVLINRGWLARGND
CCCCCCEEEEEEEECCCCCEEEEECCCCCCCCCEEEECCEECCCCCEEEEECCEEECCCC
RATLPTIVPIEGNQTVHGTAYRPSRDVFVLKDMPLPNNQWPLRVQKVDFDAIGERLGVEL
CCCCCEEEEECCCCEEEECEECCCCCEEEEECCCCCCCCCCEEEEEECHHHHHHHHCCCC
PPFEIRVTPELALGNNVPLPRHWQDVTVMGPERHKAYALQWFALALAALLIYVAAALRNR
CCEEEEECCCEECCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
RKARKTREEL
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA