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The map label for this gene is sufD [C]

Identifier: 110834728

GI number: 110834728

Start: 2143063

End: 2144292

Strand: Direct

Name: sufD [C]

Synonym: ABO_1867

Alternate gene names: 110834728

Gene position: 2143063-2144292 (Clockwise)

Preceding gene: 110834727

Following gene: 110834729

Centisome position: 68.68

GC content: 60.33

Gene sequence:

>1230_bases
ATGAGTCTCTCTGCTTCCTCTCTAGCACAGGAATTAAAAACCCAAGCGCTCGCCAACGCACAGCGTAACGGCAGCGCAGG
CGATGCTTTGGCCGCGCTGCAAGCCGCCAGCTTCCCGGAACGCAAGACCGAGAGCTGGAAGTACACCTCCTTGCAGGCGC
TGGCCGATGGCCACCTCAACGCCATTGCCGACGGCGAAATCAACCCGCCGCTGCCCGCCCTGTCTGAGCATGTGGTGACC
ATCAACAACGGGAAGTTAGTCGACCACAACCTGCCCGACGGCGTGACCTTGTCCCACGATGGCCCCGCCATCAACGGCCT
GCAGACGCCCTTTGCGTTCTATAACAGCGCCGTTGCCAGCCAGCCCATCGTGCTTACTGTGGCTGCCAATACGCGCATCG
AGCAGCCCATTCATGTACAAATTCAGGCGGCCAGTGATACTCCTGCACACTGCAACCCCCGCCTGGTAGTGGTACTCAAT
CAGGGTGCCGAAGCCGCCGTGATCGAACACTACCATGCGCAAGGCAAGGCGTTGACCAATGCGGTCACCGCCCTGATCAC
CGCCGACAACGCGCAGCTGACCCACTACCGGCTGCAAGGCGAACAGGCATCCACCATACATATCGGCACCCTGATCATTG
ATCAGCAAGGCGCCAGCAAGGTGGACAGCTACCAGCTGATGACCGGCAACCGCCTGCGCCGCAACGATGTACGCGCCCTA
ATGAACAAGAGCGGCGCCGAGCTAAACATGAAAGGTATCTTCGTGGTGCGGGATAACAGCCACGTGGACAACCAGATGTG
CGTGGAGCACGCGGTTCCCAACGGGGAATCGGATCAGAACTTCAAAGGCCTAGCCGGCGAAAGAGGCAAGGCGGTGTTCA
ACGGCCGCATCCATATCCACCCCGGTGCCAGCGGCACCAATGCCGGGCTATCCAACAAGAACCTGCTGCTCAACCCCGGC
GCGGAGATCAACACCAAGCCGGAGCTGGAAATCTACAACGATGACGTGAAATGTGCCCACGGCACCACCGTAGGCCAGCT
CGATGCCATGCAGCAATTTTACCTGCAATCGCGCGGCATCCCGGCAGCCGAAGCCAAGCGCATGCTAAGCCTAGGTTTTG
TTAACGAACTGCTGATGACCCTGCCCCACGAAAAAGTGGCACAGTGGGCCACCCCCTGGCTGGAAGCCGAACTGACCCAC
GCCTCGCCGGCGCAAGAGTCTGCCGCGTGA

Upstream 100 bases:

>100_bases
TCCTGTCCAATGGCCAAATCATCAAATCCGGGGGTAAAGAACTGGCTCTCGAACTGGAAGAAAAAGGTTACGGCTGGCTT
ACCGGAGAAGAGGAATCCGC

Downstream 100 bases:

>100_bases
TGGATATTCAGGCCCTGCGTGCGCAATTTCCGATTCTGGATCAGCAAGTCAACGGCAAACCGCTGGTGTACTTGGATAAC
GGCGCCACCACCCAAAAACC

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 409; Mature: 408

Protein sequence:

>409_residues
MSLSASSLAQELKTQALANAQRNGSAGDALAALQAASFPERKTESWKYTSLQALADGHLNAIADGEINPPLPALSEHVVT
INNGKLVDHNLPDGVTLSHDGPAINGLQTPFAFYNSAVASQPIVLTVAANTRIEQPIHVQIQAASDTPAHCNPRLVVVLN
QGAEAAVIEHYHAQGKALTNAVTALITADNAQLTHYRLQGEQASTIHIGTLIIDQQGASKVDSYQLMTGNRLRRNDVRAL
MNKSGAELNMKGIFVVRDNSHVDNQMCVEHAVPNGESDQNFKGLAGERGKAVFNGRIHIHPGASGTNAGLSNKNLLLNPG
AEINTKPELEIYNDDVKCAHGTTVGQLDAMQQFYLQSRGIPAAEAKRMLSLGFVNELLMTLPHEKVAQWATPWLEAELTH
ASPAQESAA

Sequences:

>Translated_409_residues
MSLSASSLAQELKTQALANAQRNGSAGDALAALQAASFPERKTESWKYTSLQALADGHLNAIADGEINPPLPALSEHVVT
INNGKLVDHNLPDGVTLSHDGPAINGLQTPFAFYNSAVASQPIVLTVAANTRIEQPIHVQIQAASDTPAHCNPRLVVVLN
QGAEAAVIEHYHAQGKALTNAVTALITADNAQLTHYRLQGEQASTIHIGTLIIDQQGASKVDSYQLMTGNRLRRNDVRAL
MNKSGAELNMKGIFVVRDNSHVDNQMCVEHAVPNGESDQNFKGLAGERGKAVFNGRIHIHPGASGTNAGLSNKNLLLNPG
AEINTKPELEIYNDDVKCAHGTTVGQLDAMQQFYLQSRGIPAAEAKRMLSLGFVNELLMTLPHEKVAQWATPWLEAELTH
ASPAQESAA
>Mature_408_residues
SLSASSLAQELKTQALANAQRNGSAGDALAALQAASFPERKTESWKYTSLQALADGHLNAIADGEINPPLPALSEHVVTI
NNGKLVDHNLPDGVTLSHDGPAINGLQTPFAFYNSAVASQPIVLTVAANTRIEQPIHVQIQAASDTPAHCNPRLVVVLNQ
GAEAAVIEHYHAQGKALTNAVTALITADNAQLTHYRLQGEQASTIHIGTLIIDQQGASKVDSYQLMTGNRLRRNDVRALM
NKSGAELNMKGIFVVRDNSHVDNQMCVEHAVPNGESDQNFKGLAGERGKAVFNGRIHIHPGASGTNAGLSNKNLLLNPGA
EINTKPELEIYNDDVKCAHGTTVGQLDAMQQFYLQSRGIPAAEAKRMLSLGFVNELLMTLPHEKVAQWATPWLEAELTHA
SPAQESAA

Specific function: FhuF function [C]

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI1787971, Length=385, Percent_Identity=29.8701298701299, Blast_Score=147, Evalue=1e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000825
- InterPro:   IPR011542 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 43725; Mature: 43593

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLSASSLAQELKTQALANAQRNGSAGDALAALQAASFPERKTESWKYTSLQALADGHLN
CCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEHHHHHCCCCE
AIADGEINPPLPALSEHVVTINNGKLVDHNLPDGVTLSHDGPAINGLQTPFAFYNSAVAS
EEECCCCCCCCCCCCCCEEEECCCEEEECCCCCCEEECCCCCCCCCCCCCHHHHHHHHCC
QPIVLTVAANTRIEQPIHVQIQAASDTPAHCNPRLVVVLNQGAEAAVIEHYHAQGKALTN
CCEEEEEECCCCCCCCEEEEEEECCCCCCCCCCEEEEEECCCCCCHHHHHHHHCCHHHHH
AVTALITADNAQLTHYRLQGEQASTIHIGTLIIDQQGASKVDSYQLMTGNRLRRNDVRAL
HEEEEEECCCCEEEEEEECCCCCCEEEEEEEEEECCCCCCCCCEEEECCCCCHHHHHHHH
MNKSGAELNMKGIFVVRDNSHVDNQMCVEHAVPNGESDQNFKGLAGERGKAVFNGRIHIH
HCCCCCEEEEEEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECEEEEC
PGASGTNAGLSNKNLLLNPGAEINTKPELEIYNDDVKCAHGTTVGQLDAMQQFYLQSRGI
CCCCCCCCCCCCCCEEECCCCCCCCCCCEEEECCCEEEECCCCHHHHHHHHHHHHHHCCC
PAAEAKRMLSLGFVNELLMTLPHEKVAQWATPWLEAELTHASPAQESAA
CHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCEEEECCCCCCHHCCC
>Mature Secondary Structure 
SLSASSLAQELKTQALANAQRNGSAGDALAALQAASFPERKTESWKYTSLQALADGHLN
CCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEHHHHHCCCCE
AIADGEINPPLPALSEHVVTINNGKLVDHNLPDGVTLSHDGPAINGLQTPFAFYNSAVAS
EEECCCCCCCCCCCCCCEEEECCCEEEECCCCCCEEECCCCCCCCCCCCCHHHHHHHHCC
QPIVLTVAANTRIEQPIHVQIQAASDTPAHCNPRLVVVLNQGAEAAVIEHYHAQGKALTN
CCEEEEEECCCCCCCCEEEEEEECCCCCCCCCCEEEEEECCCCCCHHHHHHHHCCHHHHH
AVTALITADNAQLTHYRLQGEQASTIHIGTLIIDQQGASKVDSYQLMTGNRLRRNDVRAL
HEEEEEECCCCEEEEEEECCCCCCEEEEEEEEEECCCCCCCCCEEEECCCCCHHHHHHHH
MNKSGAELNMKGIFVVRDNSHVDNQMCVEHAVPNGESDQNFKGLAGERGKAVFNGRIHIH
HCCCCCEEEEEEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECEEEEC
PGASGTNAGLSNKNLLLNPGAEINTKPELEIYNDDVKCAHGTTVGQLDAMQQFYLQSRGI
CCCCCCCCCCCCCCEEECCCCCCCCCCCEEEECCCEEEECCCCHHHHHHHHHHHHHHCCC
PAAEAKRMLSLGFVNELLMTLPHEKVAQWATPWLEAELTHASPAQESAA
CHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCEEEECCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]