Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

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The map label for this gene is 110834705

Identifier: 110834705

GI number: 110834705

Start: 2112434

End: 2113630

Strand: Direct

Name: 110834705

Synonym: ABO_1844

Alternate gene names: NA

Gene position: 2112434-2113630 (Clockwise)

Preceding gene: 110834704

Following gene: 110834713

Centisome position: 67.7

GC content: 55.39

Gene sequence:

>1197_bases
ATGAATGTGCAGCCCGCTAAATATGGCTTTGTTGCCGCTTTGGGCCTTTCGCAACTGGTATCTTGGGGCGTGCTGTATTA
CAGCTTCCCCTTGATAGCAGAGGCGATGATTAACGACACAGGAATAAGCCGCAGTTCGATTTACGGTGCGGCCACTGCCG
GCTTACTTCTCGCGGCAGCCATGGCTTATCCGGTTGGCACCCTGGTCGATCGTGGGCATGGCCGCAAGATTATGGTGGGG
GCAACCTTCGCCGCATCACTAACCACGCTATTATGGTCCTATGCCGCAACGGCGCCCGCCTTTTATGCAGCCATCATTAC
GCTGGCTGGGCTTCAAGCCACATTGTTGTATGAGCCCGCTTTTGCTGTGGTGGTTCGTCAATTGAACATTCAGCAGGCAC
GCTCAGCCATTACCGCGATAACCCTTTGGGCAGGCTTTTCCAGCACCCTGTTCGTACCCTTGGTGCAGTCCATGCTGGAT
GCATTAGGCTGGCGCGGCACCTTGCTGTCTCTTGCCGCCATTAACCTGGCCATCGCCGCACCACTTTATTACTGGGCCAT
TCCGCCAGCCACAACAGCACGCAACGTCACACCACCCAAAACCGTCGCCGCAAATCAACCGTCCCTTTCCCCCATCTTGC
GGCAGCCAACATTTTATCTTTTAAGCGCATCATTCTGTGCTTACATGGCCCTGTTTTCAGGTTTCACGTATCACCTCTAC
CCCCTGCTGGTCGCGCGCTCTGATGACACCCAATCCGTGGTCCTGGCCATAGCGCTCATTGGTCCTGCCCAAGTCGGTGC
AAGGGTACTGATACTACTTTTCAAAAAGATCACGATAAGACAACTGGGCCTGCTCACCGGTATCACCTTCCCCGTTGCCA
TTGTGCTGCTGAAAGCTCCGCCGAGCACACTAACGCTGGTTGCGCTGTGTCTACTCTACGGTGGCGCCAATGGCATCTTC
ACCATCGTTCGCGCAATGGCCGTTCCCGAGCTACTGTCCCGCCACCATTACGGGAGAATTAACGGCATCATGCTGATTCC
CATGTCGCTGGCACGGGCCGTTGCACCTTGGGCAATTGCAGGCTACTGGACACATACGGGGAGCGCACAAGGAGCTATCA
ATTTGATACTCGGATTGGCACTGCTAGTGCCGGTGTTATTTGGCTTGGCGATCAACACCCGCCGTCGGAACTGTTAG

Upstream 100 bases:

>100_bases
TTCGCACCGGTTATAAGCAGGTTTTATCGGTGATCTCCGCGCTGGACAGCGAAGAGGAGCCAACTCCAGTTCAACCCTGC
GCGGCACCCACGTGCCCGGG

Downstream 100 bases:

>100_bases
CTATAAACCGTAACAAACCAACAGAAATGTAGAGAGAAGGAAGAGCTCTATCTGCCCTTTAGCAATTGGGCGCTAGACCG
AACCTTCAGTGATGCGGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: Facilitator Superfamily Protein; Facilitator Superfamily Transporter; MFS Transporter; MFS Family Transporter; Facilitator Superfamily MFS_1 Domain-Containing Protein; Facilitator Superfamily Transporter Transmembrane Protein; Transmembrane Protein; MSF Transporter Transmembrane Protein; TRANSPORTER Facilitator Superfamily; MFS Permease; Transporter Facilitator Family Protein; Facilitator Family Transporter; Facilitator Superfamily Permease; Msf Transporter Protein

Number of amino acids: Translated: 398; Mature: 398

Protein sequence:

>398_residues
MNVQPAKYGFVAALGLSQLVSWGVLYYSFPLIAEAMINDTGISRSSIYGAATAGLLLAAAMAYPVGTLVDRGHGRKIMVG
ATFAASLTTLLWSYAATAPAFYAAIITLAGLQATLLYEPAFAVVVRQLNIQQARSAITAITLWAGFSSTLFVPLVQSMLD
ALGWRGTLLSLAAINLAIAAPLYYWAIPPATTARNVTPPKTVAANQPSLSPILRQPTFYLLSASFCAYMALFSGFTYHLY
PLLVARSDDTQSVVLAIALIGPAQVGARVLILLFKKITIRQLGLLTGITFPVAIVLLKAPPSTLTLVALCLLYGGANGIF
TIVRAMAVPELLSRHHYGRINGIMLIPMSLARAVAPWAIAGYWTHTGSAQGAINLILGLALLVPVLFGLAINTRRRNC

Sequences:

>Translated_398_residues
MNVQPAKYGFVAALGLSQLVSWGVLYYSFPLIAEAMINDTGISRSSIYGAATAGLLLAAAMAYPVGTLVDRGHGRKIMVG
ATFAASLTTLLWSYAATAPAFYAAIITLAGLQATLLYEPAFAVVVRQLNIQQARSAITAITLWAGFSSTLFVPLVQSMLD
ALGWRGTLLSLAAINLAIAAPLYYWAIPPATTARNVTPPKTVAANQPSLSPILRQPTFYLLSASFCAYMALFSGFTYHLY
PLLVARSDDTQSVVLAIALIGPAQVGARVLILLFKKITIRQLGLLTGITFPVAIVLLKAPPSTLTLVALCLLYGGANGIF
TIVRAMAVPELLSRHHYGRINGIMLIPMSLARAVAPWAIAGYWTHTGSAQGAINLILGLALLVPVLFGLAINTRRRNC
>Mature_398_residues
MNVQPAKYGFVAALGLSQLVSWGVLYYSFPLIAEAMINDTGISRSSIYGAATAGLLLAAAMAYPVGTLVDRGHGRKIMVG
ATFAASLTTLLWSYAATAPAFYAAIITLAGLQATLLYEPAFAVVVRQLNIQQARSAITAITLWAGFSSTLFVPLVQSMLD
ALGWRGTLLSLAAINLAIAAPLYYWAIPPATTARNVTPPKTVAANQPSLSPILRQPTFYLLSASFCAYMALFSGFTYHLY
PLLVARSDDTQSVVLAIALIGPAQVGARVLILLFKKITIRQLGLLTGITFPVAIVLLKAPPSTLTLVALCLLYGGANGIF
TIVRAMAVPELLSRHHYGRINGIMLIPMSLARAVAPWAIAGYWTHTGSAQGAINLILGLALLVPVLFGLAINTRRRNC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42306; Mature: 42306

Theoretical pI: Translated: 10.31; Mature: 10.31

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVQPAKYGFVAALGLSQLVSWGVLYYSFPLIAEAMINDTGISRSSIYGAATAGLLLAAA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
MAYPVGTLVDRGHGRKIMVGATFAASLTTLLWSYAATAPAFYAAIITLAGLQATLLYEPA
HHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEECHH
FAVVVRQLNIQQARSAITAITLWAGFSSTLFVPLVQSMLDALGWRGTLLSLAAINLAIAA
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
PLYYWAIPPATTARNVTPPKTVAANQPSLSPILRQPTFYLLSASFCAYMALFSGFTYHLY
HHHEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHCCCHHEEE
PLLVARSDDTQSVVLAIALIGPAQVGARVLILLFKKITIRQLGLLTGITFPVAIVLLKAP
EEEEECCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHCCCC
PSTLTLVALCLLYGGANGIFTIVRAMAVPELLSRHHYGRINGIMLIPMSLARAVAPWAIA
CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHCCHHHE
GYWTHTGSAQGAINLILGLALLVPVLFGLAINTRRRNC
EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MNVQPAKYGFVAALGLSQLVSWGVLYYSFPLIAEAMINDTGISRSSIYGAATAGLLLAAA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
MAYPVGTLVDRGHGRKIMVGATFAASLTTLLWSYAATAPAFYAAIITLAGLQATLLYEPA
HHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEECHH
FAVVVRQLNIQQARSAITAITLWAGFSSTLFVPLVQSMLDALGWRGTLLSLAAINLAIAA
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
PLYYWAIPPATTARNVTPPKTVAANQPSLSPILRQPTFYLLSASFCAYMALFSGFTYHLY
HHHEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHCCCHHEEE
PLLVARSDDTQSVVLAIALIGPAQVGARVLILLFKKITIRQLGLLTGITFPVAIVLLKAP
EEEEECCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHCCCC
PSTLTLVALCLLYGGANGIFTIVRAMAVPELLSRHHYGRINGIMLIPMSLARAVAPWAIA
CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHCCHHHE
GYWTHTGSAQGAINLILGLALLVPVLFGLAINTRRRNC
EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA