| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is 110834704
Identifier: 110834704
GI number: 110834704
Start: 2111202
End: 2112437
Strand: Direct
Name: 110834704
Synonym: ABO_1843
Alternate gene names: NA
Gene position: 2111202-2112437 (Clockwise)
Preceding gene: 110834703
Following gene: 110834705
Centisome position: 67.66
GC content: 56.23
Gene sequence:
>1236_bases ATGCACAAAACACTCGCCACTCTCCCGGTCGCCGTTATCGGCGCAGGCCCGATTGGCCTCAGCGCCGCCGTTCATCTGCT TAATCGCGGCTACACACCCATCATCTTTGAGGCGGGCACGCAGGCCGGCGCCCATCTTGCTCGCTGGGGACATGTCCGCA TGTTTTCACCCTGGTCGTACAACATCGACCCTGCCGCCGTTGAGCTGCTGAACCAAGGTAACTGGACGGAACCCTCGCTA GCGAAGTTTCCCACCGGGAAAGAGCTCCTAGAGCATTATGTATTGCCGCTAGCCAACCACCCCAAAATCGCCTCGCACCT GCACCTTAACAACCGGGTTCTCCATGTGAGTCGATGCAACCATGATGTATTACGCACAAAAGGACGGGACGACACCCCTT TTGTGCTCCGCATAGCAGGACCTGATGGAGAGCACGACGTCACCGCTCAAGCGGTAATCGACGCCTCAGGCACCTACCAA ACGCCCAACTGGCTTGGCGCCCATGGCATTCCTGCATTAGGAGAAAATGCTGCGTCCAACGCCATTCGCTACGGCGTTCC TGATGTCCTTGGCGTTGACCGTGCACACTACACCGACAAATCGGTACTTGTGGTTGGCGGCGGTCACTCGGCTTTTAATG CCTTACAAGACCTGGTTCGACTTTCAGAACAAAGCGCCGGCATGCAAGTGCATTGGGCTGTTCGCAGCGAATCCGTCACT AACGTAGTTCGCTCGCCTGCTAATGATGAACTCCAAGAGCGCAGAGCATTGGAGGTGCATATACAAGCGTTACTCGAGCA AGACCGAATACACGTTCATACCGGCATTGAGGTCGACACCATTAGCCAAGACGGGAACCGCCTTATCGTACACAGTAATG GCAAGTCACTTCCTCCTGTTGACCGCATCATTGCGGCAACCGGCTTCCGTCCTGACCTCAGTGTGTTATCCGAGCTTCGC ACCACCATCGATCCGGCCACACAAAGCCCCACCAGGCTAGCGCCTTTGATCGACCCAAACATGCACAGCTGTGGCTCCGT ACCTGAGCATGGCGCAGCCGAACTGTCTCACCCTGAATCGAATCTCTATATCGTTGGCATAAAAAGCTACGGTCGGGCTC CCACTTTTTTGCTTCGCACCGGTTATAAGCAGGTTTTATCGGTGATCTCCGCGCTGGACAGCGAAGAGGAGCCAACTCCA GTTCAACCCTGCGCGGCACCCACGTGCCCGGGATGA
Upstream 100 bases:
>100_bases ATCCGCCAGCTGACCGCTGCGGCCCGCGCTCGCCTAGGCTCATAGCGGCATTTTTTAACCATTTTGTTGTTAGTACCAAC AGATTAAGAAGGATGACAGT
Downstream 100 bases:
>100_bases ATGTGCAGCCCGCTAAATATGGCTTTGTTGCCGCTTTGGGCCTTTCGCAACTGGTATCTTGGGGCGTGCTGTATTACAGC TTCCCCTTGATAGCAGAGGC
Product: monooxygenase
Products: NA
Alternate protein names: FAD Dependent Oxidoreductase; Oxidoreductase; Peptidase M; Flavoprotein Involved In K+ Transport; FAD Dependent Oxidoreductase Domain-Containing Protein; FAD-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; Flavoprotein; Monooxygenase
Number of amino acids: Translated: 411; Mature: 411
Protein sequence:
>411_residues MHKTLATLPVAVIGAGPIGLSAAVHLLNRGYTPIIFEAGTQAGAHLARWGHVRMFSPWSYNIDPAAVELLNQGNWTEPSL AKFPTGKELLEHYVLPLANHPKIASHLHLNNRVLHVSRCNHDVLRTKGRDDTPFVLRIAGPDGEHDVTAQAVIDASGTYQ TPNWLGAHGIPALGENAASNAIRYGVPDVLGVDRAHYTDKSVLVVGGGHSAFNALQDLVRLSEQSAGMQVHWAVRSESVT NVVRSPANDELQERRALEVHIQALLEQDRIHVHTGIEVDTISQDGNRLIVHSNGKSLPPVDRIIAATGFRPDLSVLSELR TTIDPATQSPTRLAPLIDPNMHSCGSVPEHGAAELSHPESNLYIVGIKSYGRAPTFLLRTGYKQVLSVISALDSEEEPTP VQPCAAPTCPG
Sequences:
>Translated_411_residues MHKTLATLPVAVIGAGPIGLSAAVHLLNRGYTPIIFEAGTQAGAHLARWGHVRMFSPWSYNIDPAAVELLNQGNWTEPSL AKFPTGKELLEHYVLPLANHPKIASHLHLNNRVLHVSRCNHDVLRTKGRDDTPFVLRIAGPDGEHDVTAQAVIDASGTYQ TPNWLGAHGIPALGENAASNAIRYGVPDVLGVDRAHYTDKSVLVVGGGHSAFNALQDLVRLSEQSAGMQVHWAVRSESVT NVVRSPANDELQERRALEVHIQALLEQDRIHVHTGIEVDTISQDGNRLIVHSNGKSLPPVDRIIAATGFRPDLSVLSELR TTIDPATQSPTRLAPLIDPNMHSCGSVPEHGAAELSHPESNLYIVGIKSYGRAPTFLLRTGYKQVLSVISALDSEEEPTP VQPCAAPTCPG >Mature_411_residues MHKTLATLPVAVIGAGPIGLSAAVHLLNRGYTPIIFEAGTQAGAHLARWGHVRMFSPWSYNIDPAAVELLNQGNWTEPSL AKFPTGKELLEHYVLPLANHPKIASHLHLNNRVLHVSRCNHDVLRTKGRDDTPFVLRIAGPDGEHDVTAQAVIDASGTYQ TPNWLGAHGIPALGENAASNAIRYGVPDVLGVDRAHYTDKSVLVVGGGHSAFNALQDLVRLSEQSAGMQVHWAVRSESVT NVVRSPANDELQERRALEVHIQALLEQDRIHVHTGIEVDTISQDGNRLIVHSNGKSLPPVDRIIAATGFRPDLSVLSELR TTIDPATQSPTRLAPLIDPNMHSCGSVPEHGAAELSHPESNLYIVGIKSYGRAPTFLLRTGYKQVLSVISALDSEEEPTP VQPCAAPTCPG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44327; Mature: 44327
Theoretical pI: Translated: 6.66; Mature: 6.66
Prosite motif: PS00639 THIOL_PROTEASE_HIS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHKTLATLPVAVIGAGPIGLSAAVHLLNRGYTPIIFEAGTQAGAHLARWGHVRMFSPWSY CCCCHHHCCEEEEECCCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHCCCEEEECCCCC NIDPAAVELLNQGNWTEPSLAKFPTGKELLEHYVLPLANHPKIASHLHLNNRVLHVSRCN CCCHHHHHHHHCCCCCCCCHHCCCCHHHHHHHHHCCCCCCCCHHHEEECCCCEEEEECCC HDVLRTKGRDDTPFVLRIAGPDGEHDVTAQAVIDASGTYQTPNWLGAHGIPALGENAASN CHHHHCCCCCCCCEEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHCC AIRYGVPDVLGVDRAHYTDKSVLVVGGGHSAFNALQDLVRLSEQSAGMQVHWAVRSESVT CEECCCCHHHCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHH NVVRSPANDELQERRALEVHIQALLEQDRIHVHTGIEVDTISQDGNRLIVHSNGKSLPPV HHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCEEEEECCCCCEEEEECCCCCCCHH DRIIAATGFRPDLSVLSELRTTIDPATQSPTRLAPLIDPNMHSCGSVPEHGAAELSHPES HHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCEECCCCCCCCHHCCCCCCCCCCCCCCCCC NLYIVGIKSYGRAPTFLLRTGYKQVLSVISALDSEEEPTPVQPCAAPTCPG CEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MHKTLATLPVAVIGAGPIGLSAAVHLLNRGYTPIIFEAGTQAGAHLARWGHVRMFSPWSY CCCCHHHCCEEEEECCCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHCCCEEEECCCCC NIDPAAVELLNQGNWTEPSLAKFPTGKELLEHYVLPLANHPKIASHLHLNNRVLHVSRCN CCCHHHHHHHHCCCCCCCCHHCCCCHHHHHHHHHCCCCCCCCHHHEEECCCCEEEEECCC HDVLRTKGRDDTPFVLRIAGPDGEHDVTAQAVIDASGTYQTPNWLGAHGIPALGENAASN CHHHHCCCCCCCCEEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHCC AIRYGVPDVLGVDRAHYTDKSVLVVGGGHSAFNALQDLVRLSEQSAGMQVHWAVRSESVT CEECCCCHHHCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHH NVVRSPANDELQERRALEVHIQALLEQDRIHVHTGIEVDTISQDGNRLIVHSNGKSLPPV HHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCEEEEECCCCCEEEEECCCCCCCHH DRIIAATGFRPDLSVLSELRTTIDPATQSPTRLAPLIDPNMHSCGSVPEHGAAELSHPES HHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCEECCCCCCCCHHCCCCCCCCCCCCCCCCC NLYIVGIKSYGRAPTFLLRTGYKQVLSVISALDSEEEPTPVQPCAAPTCPG CEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA