| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is marR [C]
Identifier: 110834703
GI number: 110834703
Start: 2110700
End: 2111146
Strand: Direct
Name: marR [C]
Synonym: ABO_1842
Alternate gene names: 110834703
Gene position: 2110700-2111146 (Clockwise)
Preceding gene: 110834695
Following gene: 110834704
Centisome position: 67.65
GC content: 56.6
Gene sequence:
>447_bases ATGTCCTCCAGTACAGATCGTGCCGAACAGCTGTATGAAGCCGTCAATCAGTTGATACGGGTTCACCAGTTCCGCGATCG CGATTACATTTGTTCCCACGACGTATCCGTGGCTCAGTGCTATGCGCTCGAAACCCTAGTAAAGCGTGGCCCTTTACGGC TGCAGGCCCTGGCTTCGGAGATGTATCTGGACAAAAGCACGACCAGCAGAGTCGTCGACTCCCTGTTGCGCAAGGCATAT GTGCTGAAAACCCCGGATCCGTCAGATCAACGCGCGGTGCAACTTTCGCTGACGCCTGAGGGCAAAAAACTGTATCAGAC GATCCGCCAGGATTTGGTAGCTGAAGAAGCCTCAATGATAAAGAACCTGCCGCCGGAAGTGGTCGATGGCGCCCTGGCCT TGATCCGCCAGCTGACCGCTGCGGCCCGCGCTCGCCTAGGCTCATAG
Upstream 100 bases:
>100_bases TTCAAGCATCACATCCATATTTACTTACGCGTGATGTTGCACTGTGCCGATTCCATTAATATAGTTGCCAGTAACAACAT AAACGTTTAGACAATTATCT
Downstream 100 bases:
>100_bases CGGCATTTTTTAACCATTTTGTTGTTAGTACCAACAGATTAAGAAGGATGACAGTATGCACAAAACACTCGCCACTCTCC CGGTCGCCGTTATCGGCGCA
Product: MarR family transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 148; Mature: 147
Protein sequence:
>148_residues MSSSTDRAEQLYEAVNQLIRVHQFRDRDYICSHDVSVAQCYALETLVKRGPLRLQALASEMYLDKSTTSRVVDSLLRKAY VLKTPDPSDQRAVQLSLTPEGKKLYQTIRQDLVAEEASMIKNLPPEVVDGALALIRQLTAAARARLGS
Sequences:
>Translated_148_residues MSSSTDRAEQLYEAVNQLIRVHQFRDRDYICSHDVSVAQCYALETLVKRGPLRLQALASEMYLDKSTTSRVVDSLLRKAY VLKTPDPSDQRAVQLSLTPEGKKLYQTIRQDLVAEEASMIKNLPPEVVDGALALIRQLTAAARARLGS >Mature_147_residues SSSTDRAEQLYEAVNQLIRVHQFRDRDYICSHDVSVAQCYALETLVKRGPLRLQALASEMYLDKSTTSRVVDSLLRKAYV LKTPDPSDQRAVQLSLTPEGKKLYQTIRQDLVAEEASMIKNLPPEVVDGALALIRQLTAAARARLGS
Specific function: Repressor Of The Marrab Operon Which Is Involved In The Activation Of Both Antibiotic Resistance And Oxidative Stress Genes. Binds To The Maro Operator/Promoter Site. [C]
COG id: COG1846
COG function: function code K; Transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16547; Mature: 16416
Theoretical pI: Translated: 8.68; Mature: 8.68
Prosite motif: PS50995 HTH_MARR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSSTDRAEQLYEAVNQLIRVHQFRDRDYICSHDVSVAQCYALETLVKRGPLRLQALASE CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHH MYLDKSTTSRVVDSLLRKAYVLKTPDPSDQRAVQLSLTPEGKKLYQTIRQDLVAEEASMI HHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHH KNLPPEVVDGALALIRQLTAAARARLGS HCCCHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SSSTDRAEQLYEAVNQLIRVHQFRDRDYICSHDVSVAQCYALETLVKRGPLRLQALASE CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHH MYLDKSTTSRVVDSLLRKAYVLKTPDPSDQRAVQLSLTPEGKKLYQTIRQDLVAEEASMI HHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHH KNLPPEVVDGALALIRQLTAAARARLGS HCCCHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA