| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is 110834631
Identifier: 110834631
GI number: 110834631
Start: 2017420
End: 2017632
Strand: Direct
Name: 110834631
Synonym: ABO_1770
Alternate gene names: NA
Gene position: 2017420-2017632 (Clockwise)
Preceding gene: 110834630
Following gene: 110834632
Centisome position: 64.66
GC content: 50.7
Gene sequence:
>213_bases TTGTTAGTGGCGGGCACAGCCTTTAGTCGTATCCGCAACAAAGTGCGGGAAACCTTTGCAACTCAATACCTTGCCTGCCC CTGGAAAAAATTGTCCATTTACTTGGCTACAGTGATCAATCCAGTTCCAGCAAAGCTTACCGAAAGTGCACCGAGTGCAC CCGCCGCCAACACCAAACCTGATTACGATGGCGATTGGCCAGAATGCCCTTGA
Upstream 100 bases:
>100_bases CTGACCTCCCGTGCCCTAATAAATCCTTTTGGTCGTAATAGCTCACTACAAACCATTGCTGAAAAGCTGGACATGAAGGT CGCGCTCGCTACGGCAGCAT
Downstream 100 bases:
>100_bases GCAAAAAATCAAAGGCATTGCGTTGGCGGTTGACATCTCTACTATCGAGAAAATCAACCATCGGCAAACATACTAGTAAT AACAAGCAGGGATACACTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 70; Mature: 70
Protein sequence:
>70_residues MLVAGTAFSRIRNKVRETFATQYLACPWKKLSIYLATVINPVPAKLTESAPSAPAANTKPDYDGDWPECP
Sequences:
>Translated_70_residues MLVAGTAFSRIRNKVRETFATQYLACPWKKLSIYLATVINPVPAKLTESAPSAPAANTKPDYDGDWPECP >Mature_70_residues MLVAGTAFSRIRNKVRETFATQYLACPWKKLSIYLATVINPVPAKLTESAPSAPAANTKPDYDGDWPECP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7683; Mature: 7683
Theoretical pI: Translated: 8.73; Mature: 8.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVAGTAFSRIRNKVRETFATQYLACPWKKLSIYLATVINPVPAKLTESAPSAPAANTKP CCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC DYDGDWPECP CCCCCCCCCC >Mature Secondary Structure MLVAGTAFSRIRNKVRETFATQYLACPWKKLSIYLATVINPVPAKLTESAPSAPAANTKP CCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC DYDGDWPECP CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA