| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is fxsA [H]
Identifier: 110834575
GI number: 110834575
Start: 1951812
End: 1952330
Strand: Direct
Name: fxsA [H]
Synonym: ABO_1714
Alternate gene names: 110834575
Gene position: 1951812-1952330 (Clockwise)
Preceding gene: 110834574
Following gene: 110834579
Centisome position: 62.56
GC content: 54.91
Gene sequence:
>519_bases ATGGGTTTTGGTCGCGTCTTCTTCTTTATCTTCGGTTTCGCCCTACTGGAAGTCTTGGTGCTGGCACAGGTGGCCGGCAC TATTGGCTGGCCCATTACCATCCTCGCTACGGTGATAACAGCCTTGCTGGGTAGTTATCTATTTCGTCGCCAGGGGCTGG ATACTTGGGTGCGACTGAATCAGCGTATGCAACAGGGTGAAATGCCCGGCCAAGAAATGGTCGAAGGTATGATGCTGCTA CTCGGCGGCGCACTGCTGATCACCCCCGGATTTATTACCGATACCGTGGGGTTTGCCCTACTGTTACCCGCCTCACGCCG CTGGATGGCAAACAAGGTGATTCAAAAAGGATCCTTGCAAAGTTTCACCACCGTCAAAGGCGCCGGGTTTGCCTACACCC GCACCCACTATACAAACGGGGGAAGCAATCCATTTCAGCAACGCCCAACCAGCAATGATGATCGCACCATTACCGGCGGC GACACCATTGAGGGCGAATCCCACCGCACCGACCAATAG
Upstream 100 bases:
>100_bases GCTCTAGCAGCGCAAAGAAAGGCTGCCGGAAGAACCCGCCCCTTGAATTCCGAGCTAAGCATAACCACATATTGATTATT AACAGCAAACAGGACACCCC
Downstream 100 bases:
>100_bases CAACCGGAAGCGTCCATCGTCAGCTCTTCCGTTACCCGGTAGAGCGGATGCTTCTTAATTCTAAAGAGATCAAACAGAAC CTACAGATTAAGAATCATAT
Product: hypothetical protein
Products: NA
Alternate protein names: Suppressor of F exclusion of phage T7 [H]
Number of amino acids: Translated: 172; Mature: 171
Protein sequence:
>172_residues MGFGRVFFFIFGFALLEVLVLAQVAGTIGWPITILATVITALLGSYLFRRQGLDTWVRLNQRMQQGEMPGQEMVEGMMLL LGGALLITPGFITDTVGFALLLPASRRWMANKVIQKGSLQSFTTVKGAGFAYTRTHYTNGGSNPFQQRPTSNDDRTITGG DTIEGESHRTDQ
Sequences:
>Translated_172_residues MGFGRVFFFIFGFALLEVLVLAQVAGTIGWPITILATVITALLGSYLFRRQGLDTWVRLNQRMQQGEMPGQEMVEGMMLL LGGALLITPGFITDTVGFALLLPASRRWMANKVIQKGSLQSFTTVKGAGFAYTRTHYTNGGSNPFQQRPTSNDDRTITGG DTIEGESHRTDQ >Mature_171_residues GFGRVFFFIFGFALLEVLVLAQVAGTIGWPITILATVITALLGSYLFRRQGLDTWVRLNQRMQQGEMPGQEMVEGMMLLL GGALLITPGFITDTVGFALLLPASRRWMANKVIQKGSLQSFTTVKGAGFAYTRTHYTNGGSNPFQQRPTSNDDRTITGGD TIEGESHRTDQ
Specific function: Overexpression Alleviates The Exclusion Of Phage T7 In Cells Harboring The F Plasmid. [C]
COG id: COG3030
COG function: function code R; Protein affecting phage T7 exclusion by the F plasmid
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0716 (fxsA) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007313 [H]
Pfam domain/function: PF04186 FxsA [H]
EC number: NA
Molecular weight: Translated: 18895; Mature: 18764
Theoretical pI: Translated: 9.69; Mature: 9.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFGRVFFFIFGFALLEVLVLAQVAGTIGWPITILATVITALLGSYLFRRQGLDTWVRLN CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH QRMQQGEMPGQEMVEGMMLLLGGALLITPGFITDTVGFALLLPASRRWMANKVIQKGSLQ HHHHHCCCCHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCC SFTTVKGAGFAYTRTHYTNGGSNPFQQRPTSNDDRTITGGDTIEGESHRTDQ HHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCC >Mature Secondary Structure GFGRVFFFIFGFALLEVLVLAQVAGTIGWPITILATVITALLGSYLFRRQGLDTWVRLN CHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH QRMQQGEMPGQEMVEGMMLLLGGALLITPGFITDTVGFALLLPASRRWMANKVIQKGSLQ HHHHHCCCCHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCC SFTTVKGAGFAYTRTHYTNGGSNPFQQRPTSNDDRTITGGDTIEGESHRTDQ HHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7846149 [H]