Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

Click here to switch to the map view.

The map label for this gene is 110834481

Identifier: 110834481

GI number: 110834481

Start: 1853026

End: 1853400

Strand: Direct

Name: 110834481

Synonym: ABO_1620

Alternate gene names: NA

Gene position: 1853026-1853400 (Clockwise)

Preceding gene: 110834478

Following gene: 110834488

Centisome position: 59.39

GC content: 53.6

Gene sequence:

>375_bases
ATGCGGGAACGGGATAACCGTCGATGTTGGGCCTCCGGGCAAAGATGGGACACAAGCGGCTATGATAAGGTAGTTTCTTC
TATGACCGAACCTTTGATCACCATGAGCATGCGCCAACACAAAAACCCGGACAGCCTACGCCGGCGCCAGCAACTCGCCA
TCTTCATGGCGCTATTGGTCAGTGGCATTATGTTCGCGCCCCTGACTCTCGCGCTTTATAACGATGGCAGCGTACTTTTT
CTTATTCTGGGTTTGCTGCTTTGGCTAGGGGTGGGTCGATTTATCTATCACCTGCTGGCCCCCGCAACGCAACCCGGCAC
TCCAAAGGCCGCCAGCACTGCAGCATTAAACAAAGACAAAGAACATCCGCAGTAA

Upstream 100 bases:

>100_bases
GCCTCATCCACTATTGCCATGGCCTCTGCTCGCCGGGTTACCGGCCTCAACCAAGCGATGAAACGGCTTTTATTGATGAC
GATTTCGCAATCAATCGGCG

Downstream 100 bases:

>100_bases
TCAGAGGTGAGCATGCTTTGGCCGAGGCCGTAGTGGCCTGCACCTCAAACCCTATGCTGAATATCAGTCGGCGGTTTCGC
AAACAAAAAAGCCCGCCAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 124; Mature: 124

Protein sequence:

>124_residues
MRERDNRRCWASGQRWDTSGYDKVVSSMTEPLITMSMRQHKNPDSLRRRQQLAIFMALLVSGIMFAPLTLALYNDGSVLF
LILGLLLWLGVGRFIYHLLAPATQPGTPKAASTAALNKDKEHPQ

Sequences:

>Translated_124_residues
MRERDNRRCWASGQRWDTSGYDKVVSSMTEPLITMSMRQHKNPDSLRRRQQLAIFMALLVSGIMFAPLTLALYNDGSVLF
LILGLLLWLGVGRFIYHLLAPATQPGTPKAASTAALNKDKEHPQ
>Mature_124_residues
MRERDNRRCWASGQRWDTSGYDKVVSSMTEPLITMSMRQHKNPDSLRRRQQLAIFMALLVSGIMFAPLTLALYNDGSVLF
LILGLLLWLGVGRFIYHLLAPATQPGTPKAASTAALNKDKEHPQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13971; Mature: 13971

Theoretical pI: Translated: 10.52; Mature: 10.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRERDNRRCWASGQRWDTSGYDKVVSSMTEPLITMSMRQHKNPDSLRRRQQLAIFMALLV
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
SGIMFAPLTLALYNDGSVLFLILGLLLWLGVGRFIYHLLAPATQPGTPKAASTAALNKDK
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCC
EHPQ
CCCC
>Mature Secondary Structure
MRERDNRRCWASGQRWDTSGYDKVVSSMTEPLITMSMRQHKNPDSLRRRQQLAIFMALLV
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
SGIMFAPLTLALYNDGSVLFLILGLLLWLGVGRFIYHLLAPATQPGTPKAASTAALNKDK
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCC
EHPQ
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA