| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is 110834464
Identifier: 110834464
GI number: 110834464
Start: 1834578
End: 1835933
Strand: Direct
Name: 110834464
Synonym: ABO_1603
Alternate gene names: NA
Gene position: 1834578-1835933 (Clockwise)
Preceding gene: 110834463
Following gene: 110834470
Centisome position: 58.8
GC content: 55.38
Gene sequence:
>1356_bases ATGGCGCGGTCACTGGAGGCACTTTGGGAAAAAGTTCACGCCCAAAAAAGTCGGATTCCCTCTCTCTATGGTGATATTGA TTTCGATGTCACACCGGAGCGCTTTACCGATGACATCAAAACCCGCAGCGCCTTGCCGGAATCTTTTTCTCGCAAATACC GCGCCGGCATTCTTGCGGACAAAGAAAAAGTCGAACGGGCACGGGCCTACACCCTGCTTGGCGACACCGTGTCTGATGCT TATGCCGCGTTGATGCCGCAATACGGGTTTCGCCACCTGATCACCATGCTCAAAAAAGCCTGCGATGAAGGGCTGGAAGC CGTGGACAATGCACCCCAGGAATTGATCGATTTTATCTCTGCCATGGAATCCACCCCGCACTGGGTAGACATGGACCTTG TCCGTGAAGGGGCGCGCCTGAGCCGCAATCAAATGGCCAACTTGGCGCCCTACGTGATTCGCGGTGCCTTTGTGGCCACC TTCATGAACAAATACTCCGGCCTGCCCATGGCCATCACCGGCACCTTGGCCAACGAGTCGGTAAACCAGCGCATCAACGA AACCGCCAGTTTCTTCACCACCGCCACCCTCCCCGGCTCACTTGAACGGTTCGGCCCCGGCTTCAAAGCCGCGGCCATGG TCCGTCTGATGCATTCCATGGTGCGCTTCAACATCATCAAACGCGCCACCATCGACAAGGGCGGCCCTTGGGACCCGGCG GTATATGGCATTCCTATTCCCCAAGTAGACCAAATGCCCGCCGGCACCATGCCCGCCTACCTCACGGCCTTCAGGGCACT GCGTAAAGGCCGTAAACAGTTCACCGCCAACGAGCGAGCCATTGTCGAACTGTCACGCTACCAGTGCTTTTTACTTGGCT TGCCCGAAGAACTGCTGCCCGCCGAAGCACCAGAGATCATCAACACCATGCTCACCTACTCCGGCACCCTGCGCGAAGGC TACGATGACGAAACCTGCGGCGAACTCACCCGCGCCACCATGTCCGTTTACCGAGGAAAAAACAAAAAACTTCTCAGCAA AGCGCACAACCTGGTTGAGCGCAGCTTTTCTAAAGTCTTCTTCACCCAGGCCTTTCTGGGCCGTAAAGACAAATCAAAAG CACAAGAAATGGGCGTGGAACCCCACCTGATCGACTATGCCCTGTTTACTGTGGGCAACCTGTTGGTACTCCCCCGCCTC ATCGCCTACCGAACCCTGCAAGACATACCGGTAGCCAACAAGATAGCGGATAAAATACTGGTAAAGAGAATCAAGGAATT ACTGGTGGAATACGGCCACGCGGAATACACCACCGACGCCAATCAGTACGCCCCAACAACACAGGAAATCACATAA
Upstream 100 bases:
>100_bases AAAATCCGCATGTCCTATCCTCGTTCTTTCTTGCCATTGCCAGCAGTACGCTATAACCCCAATGTATACAGATAATTAAA TGTCTTTTTAGAGGTGCGAA
Downstream 100 bases:
>100_bases GAAAGCGCGGCCTGAAAGGTGCGCAGGTGCCGGGTTACGGCTACGCCTAACTCGGCCTACACATTCTCAACAGGCCGTAA TTCACCCAAGGGCTCAGAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 451; Mature: 450
Protein sequence:
>451_residues MARSLEALWEKVHAQKSRIPSLYGDIDFDVTPERFTDDIKTRSALPESFSRKYRAGILADKEKVERARAYTLLGDTVSDA YAALMPQYGFRHLITMLKKACDEGLEAVDNAPQELIDFISAMESTPHWVDMDLVREGARLSRNQMANLAPYVIRGAFVAT FMNKYSGLPMAITGTLANESVNQRINETASFFTTATLPGSLERFGPGFKAAAMVRLMHSMVRFNIIKRATIDKGGPWDPA VYGIPIPQVDQMPAGTMPAYLTAFRALRKGRKQFTANERAIVELSRYQCFLLGLPEELLPAEAPEIINTMLTYSGTLREG YDDETCGELTRATMSVYRGKNKKLLSKAHNLVERSFSKVFFTQAFLGRKDKSKAQEMGVEPHLIDYALFTVGNLLVLPRL IAYRTLQDIPVANKIADKILVKRIKELLVEYGHAEYTTDANQYAPTTQEIT
Sequences:
>Translated_451_residues MARSLEALWEKVHAQKSRIPSLYGDIDFDVTPERFTDDIKTRSALPESFSRKYRAGILADKEKVERARAYTLLGDTVSDA YAALMPQYGFRHLITMLKKACDEGLEAVDNAPQELIDFISAMESTPHWVDMDLVREGARLSRNQMANLAPYVIRGAFVAT FMNKYSGLPMAITGTLANESVNQRINETASFFTTATLPGSLERFGPGFKAAAMVRLMHSMVRFNIIKRATIDKGGPWDPA VYGIPIPQVDQMPAGTMPAYLTAFRALRKGRKQFTANERAIVELSRYQCFLLGLPEELLPAEAPEIINTMLTYSGTLREG YDDETCGELTRATMSVYRGKNKKLLSKAHNLVERSFSKVFFTQAFLGRKDKSKAQEMGVEPHLIDYALFTVGNLLVLPRL IAYRTLQDIPVANKIADKILVKRIKELLVEYGHAEYTTDANQYAPTTQEIT >Mature_450_residues ARSLEALWEKVHAQKSRIPSLYGDIDFDVTPERFTDDIKTRSALPESFSRKYRAGILADKEKVERARAYTLLGDTVSDAY AALMPQYGFRHLITMLKKACDEGLEAVDNAPQELIDFISAMESTPHWVDMDLVREGARLSRNQMANLAPYVIRGAFVATF MNKYSGLPMAITGTLANESVNQRINETASFFTTATLPGSLERFGPGFKAAAMVRLMHSMVRFNIIKRATIDKGGPWDPAV YGIPIPQVDQMPAGTMPAYLTAFRALRKGRKQFTANERAIVELSRYQCFLLGLPEELLPAEAPEIINTMLTYSGTLREGY DDETCGELTRATMSVYRGKNKKLLSKAHNLVERSFSKVFFTQAFLGRKDKSKAQEMGVEPHLIDYALFTVGNLLVLPRLI AYRTLQDIPVANKIADKILVKRIKELLVEYGHAEYTTDANQYAPTTQEIT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50607; Mature: 50476
Theoretical pI: Translated: 8.86; Mature: 8.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARSLEALWEKVHAQKSRIPSLYGDIDFDVTPERFTDDIKTRSALPESFSRKYRAGILAD CCCHHHHHHHHHHHHHHCCCHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCC KEKVERARAYTLLGDTVSDAYAALMPQYGFRHLITMLKKACDEGLEAVDNAPQELIDFIS HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH AMESTPHWVDMDLVREGARLSRNQMANLAPYVIRGAFVATFMNKYSGLPMAITGTLANES HHCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHH VNQRINETASFFTTATLPGSLERFGPGFKAAAMVRLMHSMVRFNIIKRATIDKGGPWDPA HHHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC VYGIPIPQVDQMPAGTMPAYLTAFRALRKGRKQFTANERAIVELSRYQCFLLGLPEELLP EECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHEEEEECCCHHHCC AEAPEIINTMLTYSGTLREGYDDETCGELTRATMSVYRGKNKKLLSKAHNLVERSFSKVF CCCHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH FTQAFLGRKDKSKAQEMGVEPHLIDYALFTVGNLLVLPRLIAYRTLQDIPVANKIADKIL HHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH VKRIKELLVEYGHAEYTTDANQYAPTTQEIT HHHHHHHHHHCCCCCCCCCCHHCCCCCCCCC >Mature Secondary Structure ARSLEALWEKVHAQKSRIPSLYGDIDFDVTPERFTDDIKTRSALPESFSRKYRAGILAD CCHHHHHHHHHHHHHHCCCHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCC KEKVERARAYTLLGDTVSDAYAALMPQYGFRHLITMLKKACDEGLEAVDNAPQELIDFIS HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH AMESTPHWVDMDLVREGARLSRNQMANLAPYVIRGAFVATFMNKYSGLPMAITGTLANES HHCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHH VNQRINETASFFTTATLPGSLERFGPGFKAAAMVRLMHSMVRFNIIKRATIDKGGPWDPA HHHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC VYGIPIPQVDQMPAGTMPAYLTAFRALRKGRKQFTANERAIVELSRYQCFLLGLPEELLP EECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHEEEEECCCHHHCC AEAPEIINTMLTYSGTLREGYDDETCGELTRATMSVYRGKNKKLLSKAHNLVERSFSKVF CCCHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH FTQAFLGRKDKSKAQEMGVEPHLIDYALFTVGNLLVLPRLIAYRTLQDIPVANKIADKIL HHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH VKRIKELLVEYGHAEYTTDANQYAPTTQEIT HHHHHHHHHHCCCCCCCCCCHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA