Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

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The map label for this gene is 110834429

Identifier: 110834429

GI number: 110834429

Start: 1790878

End: 1791633

Strand: Direct

Name: 110834429

Synonym: ABO_1568

Alternate gene names: NA

Gene position: 1790878-1791633 (Clockwise)

Preceding gene: 110834426

Following gene: 110834430

Centisome position: 57.4

GC content: 55.16

Gene sequence:

>756_bases
ATGTCACACAGCACAGAAGTTTTTCGTTCACTATTATCTTCCACGCTACAACAAGGGCGCGGTATAGCCACTAAAGGCCA
TAGCAAACATCCGCAAGAGCCGCTGGAGCTCTATGAAATGGAGGGTTGCCCTTTCTGTCGGCTGGTTCGCGAGGCGCTAA
CTGATTTAGATATAGACGTAATGATCCTCCCCTGCCCTAAGGGGGGCGACCGTTACCGACCGCTGGTAGAACGCTTAGGC
GGCAAGCAGCAATTCCCCTATTTGATGGACCCCAATACCGGCGAAGCCCTTTATGGATCTGCCGACATTATCGAGTATCT
CTATCAGCAGTATGGAGGCCGTCCTGCCCCGAAAAGTTGGCAGCTACGTCTACGCACAGCCGCCGCAATTGCCGCCTCCG
CTCCCCGCGGTGGTCATGGCATTCGCACCCGGAGCAGCCGCGCCCCGGAGCAAGCTCTGGAACTGTATTCGTTCGAAGCC
AGCCCCTTTGCCCGTTTGGTTCGCGAGCGATTGACTGAATTGCAGCTCCCTTACTTGCTGCGCCAGTGCGGCCGTGATCA
GTGGAAGGATTGGGTGTTACCGGTGGTCCGTAAGTCTCTCGATATGGACTACTCCCCTAGTCAACGCAACCGGATAGACC
TACTGGCTCGGGCTGGAAGGATTGCCGTTCCCTATCTGGTAGATCCGAATACCGGCGAAGAGCTGTTCGAATCCGAAGCT
ATTCTTCACTATCTGGATCAGACTTACGGCAACTAA

Upstream 100 bases:

>100_bases
GCAAGACCGCAAGCCGTTGGTAAATCACCCGTCACTACGGCCAATGAATGGCTTCTTGCACATGCTAATGTCGCTGCAAT
TCGTTTCAGGAGTACTCGCC

Downstream 100 bases:

>100_bases
TGCCGGCACTGCCTTGCAGCCATGAGCGGGCACCGATAAATGGTGCCCTTTGCTCTTCTACACCACACTTTTTAGTGCTA
TATATTCCAGTCACAGGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 251; Mature: 250

Protein sequence:

>251_residues
MSHSTEVFRSLLSSTLQQGRGIATKGHSKHPQEPLELYEMEGCPFCRLVREALTDLDIDVMILPCPKGGDRYRPLVERLG
GKQQFPYLMDPNTGEALYGSADIIEYLYQQYGGRPAPKSWQLRLRTAAAIAASAPRGGHGIRTRSSRAPEQALELYSFEA
SPFARLVRERLTELQLPYLLRQCGRDQWKDWVLPVVRKSLDMDYSPSQRNRIDLLARAGRIAVPYLVDPNTGEELFESEA
ILHYLDQTYGN

Sequences:

>Translated_251_residues
MSHSTEVFRSLLSSTLQQGRGIATKGHSKHPQEPLELYEMEGCPFCRLVREALTDLDIDVMILPCPKGGDRYRPLVERLG
GKQQFPYLMDPNTGEALYGSADIIEYLYQQYGGRPAPKSWQLRLRTAAAIAASAPRGGHGIRTRSSRAPEQALELYSFEA
SPFARLVRERLTELQLPYLLRQCGRDQWKDWVLPVVRKSLDMDYSPSQRNRIDLLARAGRIAVPYLVDPNTGEELFESEA
ILHYLDQTYGN
>Mature_250_residues
SHSTEVFRSLLSSTLQQGRGIATKGHSKHPQEPLELYEMEGCPFCRLVREALTDLDIDVMILPCPKGGDRYRPLVERLGG
KQQFPYLMDPNTGEALYGSADIIEYLYQQYGGRPAPKSWQLRLRTAAAIAASAPRGGHGIRTRSSRAPEQALELYSFEAS
PFARLVRERLTELQLPYLLRQCGRDQWKDWVLPVVRKSLDMDYSPSQRNRIDLLARAGRIAVPYLVDPNTGEELFESEAI
LHYLDQTYGN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28470; Mature: 28339

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: PS00195 GLUTAREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHSTEVFRSLLSSTLQQGRGIATKGHSKHPQEPLELYEMEGCPFCRLVREALTDLDIDV
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHCCCCEE
MILPCPKGGDRYRPLVERLGGKQQFPYLMDPNTGEALYGSADIIEYLYQQYGGRPAPKSW
EEEECCCCCCHHHHHHHHCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCH
QLRLRTAAAIAASAPRGGHGIRTRSSRAPEQALELYSFEASPFARLVRERLTELQLPYLL
HHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHH
RQCGRDQWKDWVLPVVRKSLDMDYSPSQRNRIDLLARAGRIAVPYLVDPNTGEELFESEA
HHHCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCEEECEEECCCCCHHHHHHHH
ILHYLDQTYGN
HHHHHHHHCCC
>Mature Secondary Structure 
SHSTEVFRSLLSSTLQQGRGIATKGHSKHPQEPLELYEMEGCPFCRLVREALTDLDIDV
CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHCCCCEE
MILPCPKGGDRYRPLVERLGGKQQFPYLMDPNTGEALYGSADIIEYLYQQYGGRPAPKSW
EEEECCCCCCHHHHHHHHCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCH
QLRLRTAAAIAASAPRGGHGIRTRSSRAPEQALELYSFEASPFARLVRERLTELQLPYLL
HHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHH
RQCGRDQWKDWVLPVVRKSLDMDYSPSQRNRIDLLARAGRIAVPYLVDPNTGEELFESEA
HHHCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCEEECEEECCCCCHHHHHHHH
ILHYLDQTYGN
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA