Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

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The map label for this gene is 110834397

Identifier: 110834397

GI number: 110834397

Start: 1759063

End: 1760268

Strand: Direct

Name: 110834397

Synonym: ABO_1536

Alternate gene names: NA

Gene position: 1759063-1760268 (Clockwise)

Preceding gene: 110834396

Following gene: 110834405

Centisome position: 56.38

GC content: 54.56

Gene sequence:

>1206_bases
ATGTTTTATATTTCAGGCGCCAGAGTAGCACTCTGGTCGACCGCATTGCTTTGCGTACAACTCGTCGGCTGCACCGGCAC
CCACTACATACCGGACCAAGGACAACTCGCCAGCCCAGCACCGGCACCTGAGGCACTGAACAGCTTCTCCGGCCAAGCAG
ATATCCATCTAAACTTGCCCGGAGGCTATGCCTCACCCAGCGTTCGCCAATACCCTAGCGAGGTTGCCACCGCGGAAGTG
AATCGTTGGTTTGCTAAATCAGGGCAAGACCTCACCGTTAGCATCCGTAACGACAACAACAAAGATAGCGGCTCAGTAAC
TCTCCTCGCCTACCTTCTAACGCTTGGCATCCTACCTTCCTGGGTTAACACCAAAGGTGAAACCGTTATGGAAGTGAAAG
CCGGAAACCAGGTGCTATTTGAAAATCGAGAGCCTGTTGCGTATCGGTCATCCCTCGCCATGCTACCCACCGCCTATATA
TTCGGCAGCCCGGGTAAAACACAATACAAAGTCATGGCCGATGACCAGCTCAATCGCCACAAGCAAGCCCTGCAGCAATA
TATCCAAATACAGCAGGCAGACTATGAAAACGTAGTCTCTGCGGGCAGCGTAGACGCCTACCGCCAATATTTAAAAAATA
ACCCGGACTCCTTCTTCCGTATGGAAACCCTGCGTCGTCTGGCAGAATTGGCGCCCAGCAGCCATGCTCTCTCCTACCAT
CGCGACAATATTGCTTTAGACAACGCTTACATCGTTTATCTGCCCGATGAATACGACATCTGGTTCCTCGGCCCGCAAGA
CATGAAGGTCTACGACGTGTTGCGACTATCCCATGACGAAGACAACCCCTTGCTGGCCTCACGCATCCGCGCTGCCAACC
AGCCCTACAAAGTATTCAACAGTGACGAAATCGCCTTGCTCAAGGAAGGCGGCCTGCCCTCTAGCCTTATCGCTGCCATG
ATTGATGCCAGCGCCAGAGCCCAAGCCGGCTCGGCCCGGCCCGCGGTTGCCAGTACCAACGCGGCCGCAGCCAATACACC
AGCAGGCCCCGCGGGCCAGAACGGCATGAATGATATTGTCGCCCAATGCGCCAAGCGTTACGCCGCGTTTAAAGCCTGCG
ATCAGATACCCTCTTTCGGCGCCAACGTGTGTCGTAGCCAGGTGAAAAAGAAATACTCCCACATGGCCTGCGAACTGGTT
CAGTAA

Upstream 100 bases:

>100_bases
AACATTATTATCCTATATTTTTCGCCTACAAATGGCAGAATGCCATTGGTAGGCACCGGGCGGGGGCCCGGCACACAACT
GAGGGAAAGGGGATATCAGA

Downstream 100 bases:

>100_bases
GCAAAACCTCGTAAGAGCAGGCCCAGCAACCGCCTACATCTCTTTCGTTGACCACTGCACGGATGAACAGTATATTGAGC
GTCCGGGTAGCCCACAGGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 401; Mature: 401

Protein sequence:

>401_residues
MFYISGARVALWSTALLCVQLVGCTGTHYIPDQGQLASPAPAPEALNSFSGQADIHLNLPGGYASPSVRQYPSEVATAEV
NRWFAKSGQDLTVSIRNDNNKDSGSVTLLAYLLTLGILPSWVNTKGETVMEVKAGNQVLFENREPVAYRSSLAMLPTAYI
FGSPGKTQYKVMADDQLNRHKQALQQYIQIQQADYENVVSAGSVDAYRQYLKNNPDSFFRMETLRRLAELAPSSHALSYH
RDNIALDNAYIVYLPDEYDIWFLGPQDMKVYDVLRLSHDEDNPLLASRIRAANQPYKVFNSDEIALLKEGGLPSSLIAAM
IDASARAQAGSARPAVASTNAAAANTPAGPAGQNGMNDIVAQCAKRYAAFKACDQIPSFGANVCRSQVKKKYSHMACELV
Q

Sequences:

>Translated_401_residues
MFYISGARVALWSTALLCVQLVGCTGTHYIPDQGQLASPAPAPEALNSFSGQADIHLNLPGGYASPSVRQYPSEVATAEV
NRWFAKSGQDLTVSIRNDNNKDSGSVTLLAYLLTLGILPSWVNTKGETVMEVKAGNQVLFENREPVAYRSSLAMLPTAYI
FGSPGKTQYKVMADDQLNRHKQALQQYIQIQQADYENVVSAGSVDAYRQYLKNNPDSFFRMETLRRLAELAPSSHALSYH
RDNIALDNAYIVYLPDEYDIWFLGPQDMKVYDVLRLSHDEDNPLLASRIRAANQPYKVFNSDEIALLKEGGLPSSLIAAM
IDASARAQAGSARPAVASTNAAAANTPAGPAGQNGMNDIVAQCAKRYAAFKACDQIPSFGANVCRSQVKKKYSHMACELV
Q
>Mature_401_residues
MFYISGARVALWSTALLCVQLVGCTGTHYIPDQGQLASPAPAPEALNSFSGQADIHLNLPGGYASPSVRQYPSEVATAEV
NRWFAKSGQDLTVSIRNDNNKDSGSVTLLAYLLTLGILPSWVNTKGETVMEVKAGNQVLFENREPVAYRSSLAMLPTAYI
FGSPGKTQYKVMADDQLNRHKQALQQYIQIQQADYENVVSAGSVDAYRQYLKNNPDSFFRMETLRRLAELAPSSHALSYH
RDNIALDNAYIVYLPDEYDIWFLGPQDMKVYDVLRLSHDEDNPLLASRIRAANQPYKVFNSDEIALLKEGGLPSSLIAAM
IDASARAQAGSARPAVASTNAAAANTPAGPAGQNGMNDIVAQCAKRYAAFKACDQIPSFGANVCRSQVKKKYSHMACELV
Q

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43785; Mature: 43785

Theoretical pI: Translated: 6.86; Mature: 6.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFYISGARVALWSTALLCVQLVGCTGTHYIPDQGQLASPAPAPEALNSFSGQADIHLNLP
CEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEEEECC
GGYASPSVRQYPSEVATAEVNRWFAKSGQDLTVSIRNDNNKDSGSVTLLAYLLTLGILPS
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCH
WVNTKGETVMEVKAGNQVLFENREPVAYRSSLAMLPTAYIFGSPGKTQYKVMADDQLNRH
HCCCCCCEEEEEECCCEEEECCCCCHHHHHHHHHHCEEEEECCCCCCEEEEECCHHHHHH
KQALQQYIQIQQADYENVVSAGSVDAYRQYLKNNPDSFFRMETLRRLAELAPSSHALSYH
HHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCC
RDNIALDNAYIVYLPDEYDIWFLGPQDMKVYDVLRLSHDEDNPLLASRIRAANQPYKVFN
CCCEEECCEEEEEECCCCCEEEECCCCCCHHHHHHHCCCCCCCHHHHHHHHCCCCCEEEC
SDEIALLKEGGLPSSLIAAMIDASARAQAGSARPAVASTNAAAANTPAGPAGQNGMNDIV
CCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
AQCAKRYAAFKACDQIPSFGANVCRSQVKKKYSHMACELVQ
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MFYISGARVALWSTALLCVQLVGCTGTHYIPDQGQLASPAPAPEALNSFSGQADIHLNLP
CEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEEEECC
GGYASPSVRQYPSEVATAEVNRWFAKSGQDLTVSIRNDNNKDSGSVTLLAYLLTLGILPS
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCH
WVNTKGETVMEVKAGNQVLFENREPVAYRSSLAMLPTAYIFGSPGKTQYKVMADDQLNRH
HCCCCCCEEEEEECCCEEEECCCCCHHHHHHHHHHCEEEEECCCCCCEEEEECCHHHHHH
KQALQQYIQIQQADYENVVSAGSVDAYRQYLKNNPDSFFRMETLRRLAELAPSSHALSYH
HHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCC
RDNIALDNAYIVYLPDEYDIWFLGPQDMKVYDVLRLSHDEDNPLLASRIRAANQPYKVFN
CCCEEECCEEEEEECCCCCEEEECCCCCCHHHHHHHCCCCCCCHHHHHHHHCCCCCEEEC
SDEIALLKEGGLPSSLIAAMIDASARAQAGSARPAVASTNAAAANTPAGPAGQNGMNDIV
CCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
AQCAKRYAAFKACDQIPSFGANVCRSQVKKKYSHMACELVQ
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA