| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is pabB [H]
Identifier: 110834296
GI number: 110834296
Start: 1639292
End: 1640428
Strand: Direct
Name: pabB [H]
Synonym: ABO_1435
Alternate gene names: 110834296
Gene position: 1639292-1640428 (Clockwise)
Preceding gene: 110834289
Following gene: 110834300
Centisome position: 52.54
GC content: 54.0
Gene sequence:
>1137_bases ATGACTTACCCTTGCGTTTTTCAATCTGAAGGTAGCTTACGCTGGCTCGGTGAGCCGGATGCGGTATTGAGCGCCCAGTC ATTGTCACAATTGCATGAGCTACGAGCCAACATAGAATACGCGCTAGCAAACGAATACTGTTTCGTTGCAGGCATACTGC CCTATGAAGTAGGGTCCGCATTACACGGATTACCTTGCGCCCCCTTTACTGCCTGGGCATACCTGTATAAAGACGCTCCC AGCCAGAACACACCTAACGCCGCTCTCGTCAGCACACCGACCGGCGCAGAAAACTTTGCCCTGGAGTCGGCATTTAAGCC GGAACAAACGCAACAAGCCTATTTGGCCAGCCTGTCACGGATCCAAGCCTATCTGCGCGCTGGCGACTGCTACCAGGTCA ACTTAGCCCAGCGTTTTTCTACCCATTTCAGCGGCTCCACTCTCAGCGCTTGGCTTGGCTTACAACAGGCCCACCCCGCC CCACATAGCTGCTATTTCCAAACGGATGACGGCAACAGTGTATTCGGGGTTTCACCGGAGCGTTTTCTTTCCATCAGGAA TCGACAGGTAGTGGCGGAGCCTATCAAGGGCTCTCGCCCGCGAGGCGCTAACCCTGAAGAAGATGGTCGGCTGGCGGCTG AGTTAAGAGCCAACCCCAAAGACCTGGCCGAGAATCTGATGATAGTGGATCTGCTACGCAATGATCTGGGGCTCAGCTGT GAATCGGGCAGCATCCAGGCTTCGCCACTATTTGAATTACGCCAGTTCAGCAATGTACAACACCTTGTCAGCACCATCAC CGGCACCCTGAAAGCCGACATCACGCCGCTGGAGGCTCTATTCCGTGCCTTTCCTGGGGGGTCGATTACCGGGGCTCCCA AGCAACGAGCCATGGAAATCATCACCGAACTTGAGCCTGTCGCCCGTGGAGCCTATTGCGGTAGTTTCTTCTGGATGGAC GATCAAGAGAACCTGGACAGCAACATCCTGATTCGCACTATGCAAACTGACGGAGATCGGATCTACTGCCATGGCGGCGG CGGAATCGTATTTGATTCAGACCCCTTAGCAGAATACGAGGAAAGTCTGTTCAAGGTGGAAAAGCTGATGCGGGCTCTTG AGGAAAGATTTCTTTAA
Upstream 100 bases:
>100_bases CGGCCTGTGTTCTGCGGTATAACCGTTACTCATCAGCAACAAGAATGGGCATCGTTGCATTACGCGGGTAGACTAGCGCC TCATTTTACTCTGGCAGCTC
Downstream 100 bases:
>100_bases GTGCCACTTCGTGCAGCGCGTGCTACGCAACACGCCAAATTTATTGGCCTGTTGCGTACAGCCTGCCACAACGTTACAGC GAAATATCGCGTTCGCTGGC
Product: para-aminobenzoate synthase component I
Products: NA
Alternate protein names: ADC synthase; Para-aminobenzoate synthase component I [H]
Number of amino acids: Translated: 378; Mature: 377
Protein sequence:
>378_residues MTYPCVFQSEGSLRWLGEPDAVLSAQSLSQLHELRANIEYALANEYCFVAGILPYEVGSALHGLPCAPFTAWAYLYKDAP SQNTPNAALVSTPTGAENFALESAFKPEQTQQAYLASLSRIQAYLRAGDCYQVNLAQRFSTHFSGSTLSAWLGLQQAHPA PHSCYFQTDDGNSVFGVSPERFLSIRNRQVVAEPIKGSRPRGANPEEDGRLAAELRANPKDLAENLMIVDLLRNDLGLSC ESGSIQASPLFELRQFSNVQHLVSTITGTLKADITPLEALFRAFPGGSITGAPKQRAMEIITELEPVARGAYCGSFFWMD DQENLDSNILIRTMQTDGDRIYCHGGGGIVFDSDPLAEYEESLFKVEKLMRALEERFL
Sequences:
>Translated_378_residues MTYPCVFQSEGSLRWLGEPDAVLSAQSLSQLHELRANIEYALANEYCFVAGILPYEVGSALHGLPCAPFTAWAYLYKDAP SQNTPNAALVSTPTGAENFALESAFKPEQTQQAYLASLSRIQAYLRAGDCYQVNLAQRFSTHFSGSTLSAWLGLQQAHPA PHSCYFQTDDGNSVFGVSPERFLSIRNRQVVAEPIKGSRPRGANPEEDGRLAAELRANPKDLAENLMIVDLLRNDLGLSC ESGSIQASPLFELRQFSNVQHLVSTITGTLKADITPLEALFRAFPGGSITGAPKQRAMEIITELEPVARGAYCGSFFWMD DQENLDSNILIRTMQTDGDRIYCHGGGGIVFDSDPLAEYEESLFKVEKLMRALEERFL >Mature_377_residues TYPCVFQSEGSLRWLGEPDAVLSAQSLSQLHELRANIEYALANEYCFVAGILPYEVGSALHGLPCAPFTAWAYLYKDAPS QNTPNAALVSTPTGAENFALESAFKPEQTQQAYLASLSRIQAYLRAGDCYQVNLAQRFSTHFSGSTLSAWLGLQQAHPAP HSCYFQTDDGNSVFGVSPERFLSIRNRQVVAEPIKGSRPRGANPEEDGRLAAELRANPKDLAENLMIVDLLRNDLGLSCE SGSIQASPLFELRQFSNVQHLVSTITGTLKADITPLEALFRAFPGGSITGAPKQRAMEIITELEPVARGAYCGSFFWMDD QENLDSNILIRTMQTDGDRIYCHGGGGIVFDSDPLAEYEESLFKVEKLMRALEERFL
Specific function: Catalyzes the biosynthesis of 4-amino-4-deoxychorismate (ADC) from chorismate and glutamine [H]
COG id: COG0147
COG function: function code EH; Anthranilate/para-aminobenzoate synthases component I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the anthranilate synthase component I family [H]
Homologues:
Organism=Escherichia coli, GI1788114, Length=279, Percent_Identity=46.2365591397849, Blast_Score=251, Evalue=4e-68, Organism=Escherichia coli, GI1787518, Length=273, Percent_Identity=34.7985347985348, Blast_Score=161, Evalue=8e-41, Organism=Escherichia coli, GI87082077, Length=198, Percent_Identity=27.2727272727273, Blast_Score=76, Evalue=4e-15, Organism=Escherichia coli, GI1786809, Length=213, Percent_Identity=24.8826291079812, Blast_Score=74, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6320935, Length=300, Percent_Identity=34.6666666666667, Blast_Score=176, Evalue=6e-45, Organism=Saccharomyces cerevisiae, GI6324361, Length=284, Percent_Identity=26.7605633802817, Blast_Score=90, Evalue=7e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005801 - InterPro: IPR019999 - InterPro: IPR006805 - InterPro: IPR015890 - InterPro: IPR005802 [H]
Pfam domain/function: PF04715 Anth_synt_I_N; PF00425 Chorismate_bind [H]
EC number: =2.6.1.85 [H]
Molecular weight: Translated: 41605; Mature: 41474
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: PS01109 RIBOSOMAL_L10
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYPCVFQSEGSLRWLGEPDAVLSAQSLSQLHELRANIEYALANEYCFVAGILPYEVGSA CCCCCEEECCCCEEECCCCHHHHHHHHHHHHHHHHHCCEEEEECCEEEEEECCHHHHHHH LHGLPCAPFTAWAYLYKDAPSQNTPNAALVSTPTGAENFALESAFKPEQTQQAYLASLSR HCCCCCCHHHHHHHHHHCCCCCCCCCCEEEECCCCCCHHHHHCCCCCHHHHHHHHHHHHH IQAYLRAGDCYQVNLAQRFSTHFSGSTLSAWLGLQQAHPAPHSCYFQTDDGNSVFGVSPE HHHHHHCCCEEEEEHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEECCCCEEECCCHH RFLSIRNRQVVAEPIKGSRPRGANPEEDGRLAAELRANPKDLAENLMIVDLLRNDLGLSC HHHHHHCCEEEECCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHCCCCC ESGSIQASPLFELRQFSNVQHLVSTITGTLKADITPLEALFRAFPGGSITGAPKQRAMEI CCCCEECCHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCHHHHHHH ITELEPVARGAYCGSFFWMDDQENLDSNILIRTMQTDGDRIYCHGGGGIVFDSDPLAEYE HHHHHHHHCCCEECEEEEECCCCCCCCCEEEEEEECCCCEEEEECCCEEEECCCCHHHHH ESLFKVEKLMRALEERFL HHHHHHHHHHHHHHHHCC >Mature Secondary Structure TYPCVFQSEGSLRWLGEPDAVLSAQSLSQLHELRANIEYALANEYCFVAGILPYEVGSA CCCCEEECCCCEEECCCCHHHHHHHHHHHHHHHHHCCEEEEECCEEEEEECCHHHHHHH LHGLPCAPFTAWAYLYKDAPSQNTPNAALVSTPTGAENFALESAFKPEQTQQAYLASLSR HCCCCCCHHHHHHHHHHCCCCCCCCCCEEEECCCCCCHHHHHCCCCCHHHHHHHHHHHHH IQAYLRAGDCYQVNLAQRFSTHFSGSTLSAWLGLQQAHPAPHSCYFQTDDGNSVFGVSPE HHHHHHCCCEEEEEHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEECCCCEEECCCHH RFLSIRNRQVVAEPIKGSRPRGANPEEDGRLAAELRANPKDLAENLMIVDLLRNDLGLSC HHHHHHCCEEEECCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHCCCCC ESGSIQASPLFELRQFSNVQHLVSTITGTLKADITPLEALFRAFPGGSITGAPKQRAMEI CCCCEECCHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCHHHHHHH ITELEPVARGAYCGSFFWMDDQENLDSNILIRTMQTDGDRIYCHGGGGIVFDSDPLAEYE HHHHHHHHCCCEECEEEEECCCCCCCCCEEEEEEECCCCEEEEECCCEEEECCCCHHHHH ESLFKVEKLMRALEERFL HHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3057324; 2251281 [H]