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The map label for this gene is ydiA [C]

Identifier: 110834289

GI number: 110834289

Start: 1629053

End: 1629871

Strand: Direct

Name: ydiA [C]

Synonym: ABO_1428

Alternate gene names: 110834289

Gene position: 1629053-1629871 (Clockwise)

Preceding gene: 110834286

Following gene: 110834296

Centisome position: 52.21

GC content: 53.85

Gene sequence:

>819_bases
ATGAAACGAACCGCTTTTTACCTTTCCGATGGTACCGGTATCACCGCAGAAACCTTGGGTCACAGCATGCTTAGCCAATT
CGGCAGCATCGAATTTATTCAGGTGACTCTGCCTTTCGTCCAATCCGATGAGCAAACTCGTGAAGCGGTGGCTCGTATCA
ACAAAGCCGCAAAAGAAGATGGCGCTAAGCCAGTAGTGTTTTCCACGCTGGTAAACACTGATCACCGCGCCATACTGCAC
GGCTGTGACGCCCTGATTCTCGACTTGTTTGGCGCCTTCCTACGGCCCCTTGAAGACGAGCTTGGGGTGCGTTCCAGTCA
CAAAATCAACCAAAGCCACGCCATTCGCGATGCAGAGTCTTATCGCATCCGCATTAACGCGGTGCATTTCGCCCTGGATA
ATGACGACGGTGCACGCACTCGGCATTATGACCAGGCCGACATCATCCTCATCGGCGTTTCGCGCTCCGGCAAAACCCCG
ACATGCCTTTACCTAGCGTTGCAATTCGGCCTGTTCACCGCCAACTACCCGCTCACCGAAGATGATTTCGACGACCTGCG
CCTCCCCAAAGCTCTGATGGAGCACAAGCATAAACTGTTCGGCCTCACCATCGATGCCGACCGCCTGAGCGCCATCCGTA
GCGAGCGCAAAGCCGGTAGCAAATATGCCTCTCCGCGTCAGTGTGATATGGAATTACGAGCACTGGAAGCCATGTACAAC
AAGCATAATATTCCCTATTTGGATGCAACGGAGCTTTCGATCGAGGAAATTAGTACGCGGGTATTGGCGATGAAGGGGCT
GAAGCGGCGGCTGCAGTAG

Upstream 100 bases:

>100_bases
GCAGGAGCGGCGCTTAAGTCATGAACATCACACTTTCCACGACCAGCCCCTAACCGGGCAGAGGCGCTCCGCTCCTACGG
TAAAAGAAACGGCAAACACA

Downstream 100 bases:

>100_bases
TCAGTCCCGCCGTGGGCAGCGGGCCTGCAAGCGATACATTACGATGATAGCCCTCATAAACTGCTAGCATATTAGTGGCG
GCAGCCCCTCTGCGCCGACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 272; Mature: 272

Protein sequence:

>272_residues
MKRTAFYLSDGTGITAETLGHSMLSQFGSIEFIQVTLPFVQSDEQTREAVARINKAAKEDGAKPVVFSTLVNTDHRAILH
GCDALILDLFGAFLRPLEDELGVRSSHKINQSHAIRDAESYRIRINAVHFALDNDDGARTRHYDQADIILIGVSRSGKTP
TCLYLALQFGLFTANYPLTEDDFDDLRLPKALMEHKHKLFGLTIDADRLSAIRSERKAGSKYASPRQCDMELRALEAMYN
KHNIPYLDATELSIEEISTRVLAMKGLKRRLQ

Sequences:

>Translated_272_residues
MKRTAFYLSDGTGITAETLGHSMLSQFGSIEFIQVTLPFVQSDEQTREAVARINKAAKEDGAKPVVFSTLVNTDHRAILH
GCDALILDLFGAFLRPLEDELGVRSSHKINQSHAIRDAESYRIRINAVHFALDNDDGARTRHYDQADIILIGVSRSGKTP
TCLYLALQFGLFTANYPLTEDDFDDLRLPKALMEHKHKLFGLTIDADRLSAIRSERKAGSKYASPRQCDMELRALEAMYN
KHNIPYLDATELSIEEISTRVLAMKGLKRRLQ
>Mature_272_residues
MKRTAFYLSDGTGITAETLGHSMLSQFGSIEFIQVTLPFVQSDEQTREAVARINKAAKEDGAKPVVFSTLVNTDHRAILH
GCDALILDLFGAFLRPLEDELGVRSSHKINQSHAIRDAESYRIRINAVHFALDNDDGARTRHYDQADIILIGVSRSGKTP
TCLYLALQFGLFTANYPLTEDDFDDLRLPKALMEHKHKLFGLTIDADRLSAIRSERKAGSKYASPRQCDMELRALEAMYN
KHNIPYLDATELSIEEISTRVLAMKGLKRRLQ

Specific function: Unknown

COG id: COG1806

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pyruvate, phosphate dikinase regulatory protein family

Homologues:

Organism=Escherichia coli, GI1787995, Length=271, Percent_Identity=44.6494464944649, Blast_Score=249, Evalue=1e-67,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1428_ALCBS (Q0VPM2)

Other databases:

- EMBL:   AM286690
- RefSeq:   YP_693148.1
- STRING:   Q0VPM2
- GeneID:   4212611
- GenomeReviews:   AM286690_GR
- KEGG:   abo:ABO_1428
- NMPDR:   fig|393595.12.peg.1436
- eggNOG:   COG1806
- HOGENOM:   HBG304855
- OMA:   MERIEAV
- PhylomeDB:   Q0VPM2
- ProtClustDB:   PRK05339
- BioCyc:   ABOR393595:ABO_1428-MONOMER
- HAMAP:   MF_01062
- InterPro:   IPR005177

Pfam domain/function: PF03618 DUF299

EC number: NA

Molecular weight: Translated: 30567; Mature: 30567

Theoretical pI: Translated: 7.07; Mature: 7.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRTAFYLSDGTGITAETLGHSMLSQFGSIEFIQVTLPFVQSDEQTREAVARINKAAKED
CCCEEEEEECCCCCCHHHHHHHHHHHHCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHC
GAKPVVFSTLVNTDHRAILHGCDALILDLFGAFLRPLEDELGVRSSHKINQSHAIRDAES
CCCCEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCC
YRIRINAVHFALDNDDGARTRHYDQADIILIGVSRSGKTPTCLYLALQFGLFTANYPLTE
EEEEEEEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCC
DDFDDLRLPKALMEHKHKLFGLTIDADRLSAIRSERKAGSKYASPRQCDMELRALEAMYN
CCHHHHHHHHHHHHCCHHHEEEEECHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
KHNIPYLDATELSIEEISTRVLAMKGLKRRLQ
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKRTAFYLSDGTGITAETLGHSMLSQFGSIEFIQVTLPFVQSDEQTREAVARINKAAKED
CCCEEEEEECCCCCCHHHHHHHHHHHHCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHC
GAKPVVFSTLVNTDHRAILHGCDALILDLFGAFLRPLEDELGVRSSHKINQSHAIRDAES
CCCCEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCC
YRIRINAVHFALDNDDGARTRHYDQADIILIGVSRSGKTPTCLYLALQFGLFTANYPLTE
EEEEEEEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCC
DDFDDLRLPKALMEHKHKLFGLTIDADRLSAIRSERKAGSKYASPRQCDMELRALEAMYN
CCHHHHHHHHHHHHCCHHHEEEEECHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
KHNIPYLDATELSIEEISTRVLAMKGLKRRLQ
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA