| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is nhaP [H]
Identifier: 110834265
GI number: 110834265
Start: 1600032
End: 1601990
Strand: Direct
Name: nhaP [H]
Synonym: ABO_1404
Alternate gene names: 110834265
Gene position: 1600032-1601990 (Clockwise)
Preceding gene: 110834263
Following gene: 110834272
Centisome position: 51.28
GC content: 53.19
Gene sequence:
>1959_bases ATGGATTTAAGTGTCCCTTTCCAGCTAGCCATTATCACTGTGGTCGCTTTTCTCTGCCAATGGCTGTCTTGGAGAATCAA ACTCCCTGCCATTTTGCCATTGCTGCTTACCGGTTTGGCGCTTGGCCCGCTTTGGGGTGTACTACAACCCAAAGAACTGT TCGGTGATTTGCTACTTCCCGGTGTATCCCTGGCGGTCTCTATCATTCTGTTCGAAGGCGCCATGACACTGCGCTTCGAT GAAATTCGCGGCTTGGAAAAAACCGTTCGCCGGCTTGTTACTTGGGGTGCCTTAGTCACCTGGAGCATTGTTACCGTCTC TGCTTGGTGGGTGCTAAAACTCCCCTTGGGTCTAGCTTTACTTTTTGGTGCGCTGGTCGTGGTGACAGGCCCAACCGTTA TTGTTCCTCTGCTACGCAGTGTCCGCCCAGTAAGCAGCGTATCTCGATTGCTGCGTTGGGAAGGCATCGTTATCGATCCC TTGGGCGCTATTTTTGCTGTATTGGCCTACGAGTTGGTGGTGGCCAGCGGCCAAGATGGGGCCATACTGCACACGCTGTG GCTGTTCTTCCAGACAATCGGCGTGGGAGCAGCCATCGGTTGTGCTGTGGCTTTCGGCTTGGCCGAGTTGTTGCGTCGGC ATCTAATCCCTGAATACTTGCGCAGCTTTCTGGTGCTGTCGTCCATCATTGGTGAGTTTGTTTTAGCCAATGGCCTGAGT GAGGAATCCGGACTGGTTGCGGTTACCGTAACCGGGATCGTGTTGGCTAACCGCAAAGGCGTGCGCACCGACGACATTCT CCACTTCAAAGAAAACCTATCAGTGATGCTGATTTCCGGTCTCTTTATCGTGCTTGCCGCACGATTGGAAATGAGCGAAC TCAGTCAACTCGGTGCTACCGCTCTGGCGGTTTTAGTGATTATTCAGTTCGTTGCTCGGCCATTGTCAGTATGGTTATCT ACTCTTGGCTCCTCACTGAATTGGCGTGAAAAATCACTGCTCGCCTGGATTGCACCACGGGGCATTGTCGCCGCGGCGAT CTCGGCCCTGTTCGCCGAACGGTTACAGCAAAACGGTGTTCCCGGTGCCGAGAAACTGGTGCCACTTACCTTCATGGTGA TTATCGGCACGGTGGCATTACAGAGTCTCACCGCCCGTCCACTGGCTCGCCTGCTGAAAGTAGCAGAGCCGGCGCCACGC GGTTTCCTGATTATCGGTGCTAACCCGGTGGCCCGTGCCATTGGCGCTGCCTTGCAGAAGAACCAATACCCGGTCGTGGT CACGGATTCCAGTTGGGAATCCATCCGTTCTGCCCGTATGGAAGGACTAGGAACCTTTTATGGAAACCCGGTCTCACAGC ACGCTGACCAATATTTGGATCTCGTTGGTTACGGAAAACTGCTGGGGTTAAGCCCTCGGCGAGAGCTCAACACTATGGCG ACCATGCGCTACCGGCTGGAATTCGGAGAGCAAAACATCTTTAGCCTGCCCACGCAAAAAACGGAAAAGGAAGTGAAGCA TGAGGTCGCCCCGGAGCACCGTGGTGCCACCCTCTTCGCTCCCGACATGACCTATGCCCGCCTAGCCAGCCTGCTCAGCC AAGGCGCAGAAATTCGTAAAACGCGGCTGACTGAAGAATTTAGTTTTCAGGCTTACAACGAAACACCAGGACGCCAAGTT TGGCCATTATTTGCCATTGATCCCCGCGAACATATTGTTGTGTTCTCTGCGGAAGAAAGCCCCGAGCCCAAAGCCGGCTG GTACATTCTCGGGTTAGTAAAAGAAGATGCTGCCAAGGAAGAAAAAAAGGCTGAAGCTCGTGCAGAGGCGGCCGCCGAAA AGGTAGCCACTGCAAATAAATCAGAGGACAAAAACGAGTCAAAAACCCATAAACGTGACGAAAAGACGGACACCAATAAG GGTTCAAAACAAACGGCAGGCAAAACACAGCAAAATTGA
Upstream 100 bases:
>100_bases ATCTCCAACCCCACTTTGCCATGAGCTACGTTAGCATGCCTGCCCGATGCTTAGTGGCGTGCACGAGGGTTGCGGAACCG TCTAATCACCTAGGAACTTC
Downstream 100 bases:
>100_bases CCTGTTGCCTCACTGCTAACTAAAGAGCCTGCCCAACTTTACTACGGGGCAGGCTTTTTAGTTGCTATCAGGGCTCGGCT CTGAATCCTCATCCCCCACA
Product: NhaP-type Na+/H+ and K+/H+ antiporters
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 652; Mature: 652
Protein sequence:
>652_residues MDLSVPFQLAIITVVAFLCQWLSWRIKLPAILPLLLTGLALGPLWGVLQPKELFGDLLLPGVSLAVSIILFEGAMTLRFD EIRGLEKTVRRLVTWGALVTWSIVTVSAWWVLKLPLGLALLFGALVVVTGPTVIVPLLRSVRPVSSVSRLLRWEGIVIDP LGAIFAVLAYELVVASGQDGAILHTLWLFFQTIGVGAAIGCAVAFGLAELLRRHLIPEYLRSFLVLSSIIGEFVLANGLS EESGLVAVTVTGIVLANRKGVRTDDILHFKENLSVMLISGLFIVLAARLEMSELSQLGATALAVLVIIQFVARPLSVWLS TLGSSLNWREKSLLAWIAPRGIVAAAISALFAERLQQNGVPGAEKLVPLTFMVIIGTVALQSLTARPLARLLKVAEPAPR GFLIIGANPVARAIGAALQKNQYPVVVTDSSWESIRSARMEGLGTFYGNPVSQHADQYLDLVGYGKLLGLSPRRELNTMA TMRYRLEFGEQNIFSLPTQKTEKEVKHEVAPEHRGATLFAPDMTYARLASLLSQGAEIRKTRLTEEFSFQAYNETPGRQV WPLFAIDPREHIVVFSAEESPEPKAGWYILGLVKEDAAKEEKKAEARAEAAAEKVATANKSEDKNESKTHKRDEKTDTNK GSKQTAGKTQQN
Sequences:
>Translated_652_residues MDLSVPFQLAIITVVAFLCQWLSWRIKLPAILPLLLTGLALGPLWGVLQPKELFGDLLLPGVSLAVSIILFEGAMTLRFD EIRGLEKTVRRLVTWGALVTWSIVTVSAWWVLKLPLGLALLFGALVVVTGPTVIVPLLRSVRPVSSVSRLLRWEGIVIDP LGAIFAVLAYELVVASGQDGAILHTLWLFFQTIGVGAAIGCAVAFGLAELLRRHLIPEYLRSFLVLSSIIGEFVLANGLS EESGLVAVTVTGIVLANRKGVRTDDILHFKENLSVMLISGLFIVLAARLEMSELSQLGATALAVLVIIQFVARPLSVWLS TLGSSLNWREKSLLAWIAPRGIVAAAISALFAERLQQNGVPGAEKLVPLTFMVIIGTVALQSLTARPLARLLKVAEPAPR GFLIIGANPVARAIGAALQKNQYPVVVTDSSWESIRSARMEGLGTFYGNPVSQHADQYLDLVGYGKLLGLSPRRELNTMA TMRYRLEFGEQNIFSLPTQKTEKEVKHEVAPEHRGATLFAPDMTYARLASLLSQGAEIRKTRLTEEFSFQAYNETPGRQV WPLFAIDPREHIVVFSAEESPEPKAGWYILGLVKEDAAKEEKKAEARAEAAAEKVATANKSEDKNESKTHKRDEKTDTNK GSKQTAGKTQQN >Mature_652_residues MDLSVPFQLAIITVVAFLCQWLSWRIKLPAILPLLLTGLALGPLWGVLQPKELFGDLLLPGVSLAVSIILFEGAMTLRFD EIRGLEKTVRRLVTWGALVTWSIVTVSAWWVLKLPLGLALLFGALVVVTGPTVIVPLLRSVRPVSSVSRLLRWEGIVIDP LGAIFAVLAYELVVASGQDGAILHTLWLFFQTIGVGAAIGCAVAFGLAELLRRHLIPEYLRSFLVLSSIIGEFVLANGLS EESGLVAVTVTGIVLANRKGVRTDDILHFKENLSVMLISGLFIVLAARLEMSELSQLGATALAVLVIIQFVARPLSVWLS TLGSSLNWREKSLLAWIAPRGIVAAAISALFAERLQQNGVPGAEKLVPLTFMVIIGTVALQSLTARPLARLLKVAEPAPR GFLIIGANPVARAIGAALQKNQYPVVVTDSSWESIRSARMEGLGTFYGNPVSQHADQYLDLVGYGKLLGLSPRRELNTMA TMRYRLEFGEQNIFSLPTQKTEKEVKHEVAPEHRGATLFAPDMTYARLASLLSQGAEIRKTRLTEEFSFQAYNETPGRQV WPLFAIDPREHIVVFSAEESPEPKAGWYILGLVKEDAAKEEKKAEARAEAAAEKVATANKSEDKNESKTHKRDEKTDTNK GSKQTAGKTQQN
Specific function: Participates in control of cell volume in low-osmolarity conditions [H]
COG id: COG0025
COG function: function code P; NhaP-type Na+/H+ and K+/H+ antiporters
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 RCK C-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI87081854, Length=324, Percent_Identity=28.0864197530864, Blast_Score=72, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006153 - InterPro: IPR016169 - InterPro: IPR006037 - InterPro: IPR005170 [H]
Pfam domain/function: PF03471 CorC_HlyC; PF00999 Na_H_Exchanger; PF02080 TrkA_C [H]
EC number: NA
Molecular weight: Translated: 71196; Mature: 71196
Theoretical pI: Translated: 9.48; Mature: 9.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLSVPFQLAIITVVAFLCQWLSWRIKLPAILPLLLTGLALGPLWGVLQPKELFGDLLLP CCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH GVSLAVSIILFEGAMTLRFDEIRGLEKTVRRLVTWGALVTWSIVTVSAWWVLKLPLGLAL HHHHHHHHHHHHCCCEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFGALVVVTGPTVIVPLLRSVRPVSSVSRLLRWEGIVIDPLGAIFAVLAYELVVASGQDG HHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHCCCCCC AILHTLWLFFQTIGVGAAIGCAVAFGLAELLRRHLIPEYLRSFLVLSSIIGEFVLANGLS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC EESGLVAVTVTGIVLANRKGVRTDDILHFKENLSVMLISGLFIVLAARLEMSELSQLGAT CCCCEEEEEEEEEEEECCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCHHHHHHHHHH ALAVLVIIQFVARPLSVWLSTLGSSLNWREKSLLAWIAPRGIVAAAISALFAERLQQNGV HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC PGAEKLVPLTFMVIIGTVALQSLTARPLARLLKVAEPAPRGFLIIGANPVARAIGAALQK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHC NQYPVVVTDSSWESIRSARMEGLGTFYGNPVSQHADQYLDLVGYGKLLGLSPRRELNTMA CCCCEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHCCCCHHHHHHHH TMRYRLEFGEQNIFSLPTQKTEKEVKHEVAPEHRGATLFAPDMTYARLASLLSQGAEIRK HHHHHHHCCCCCCEECCCHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHCCHHHHH TRLTEEFSFQAYNETPGRQVWPLFAIDPREHIVVFSAEESPEPKAGWYILGLVKEDAAKE HHHHHHHCCEECCCCCCCEEEEEEEECCCCEEEEEECCCCCCCCCCEEEEEEEHHHHHHH EKKAEARAEAAAEKVATANKSEDKNESKTHKRDEKTDTNKGSKQTAGKTQQN HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MDLSVPFQLAIITVVAFLCQWLSWRIKLPAILPLLLTGLALGPLWGVLQPKELFGDLLLP CCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH GVSLAVSIILFEGAMTLRFDEIRGLEKTVRRLVTWGALVTWSIVTVSAWWVLKLPLGLAL HHHHHHHHHHHHCCCEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFGALVVVTGPTVIVPLLRSVRPVSSVSRLLRWEGIVIDPLGAIFAVLAYELVVASGQDG HHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHCCCCCC AILHTLWLFFQTIGVGAAIGCAVAFGLAELLRRHLIPEYLRSFLVLSSIIGEFVLANGLS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC EESGLVAVTVTGIVLANRKGVRTDDILHFKENLSVMLISGLFIVLAARLEMSELSQLGAT CCCCEEEEEEEEEEEECCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCHHHHHHHHHH ALAVLVIIQFVARPLSVWLSTLGSSLNWREKSLLAWIAPRGIVAAAISALFAERLQQNGV HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC PGAEKLVPLTFMVIIGTVALQSLTARPLARLLKVAEPAPRGFLIIGANPVARAIGAALQK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHC NQYPVVVTDSSWESIRSARMEGLGTFYGNPVSQHADQYLDLVGYGKLLGLSPRRELNTMA CCCCEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHCCCCHHHHHHHH TMRYRLEFGEQNIFSLPTQKTEKEVKHEVAPEHRGATLFAPDMTYARLASLLSQGAEIRK HHHHHHHCCCCCCEECCCHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHCCHHHHH TRLTEEFSFQAYNETPGRQVWPLFAIDPREHIVVFSAEESPEPKAGWYILGLVKEDAAKE HHHHHHHCCEECCCCCCCEEEEEEEECCCCEEEEEECCCCCCCCCCEEEEEEEHHHHHHH EKKAEARAEAAAEKVATANKSEDKNESKTHKRDEKTDTNKGSKQTAGKTQQN HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA