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The map label for this gene is tnpA [H]

Identifier: 110834215

GI number: 110834215

Start: 1535030

End: 1536232

Strand: Direct

Name: tnpA [H]

Synonym: ABO_1354

Alternate gene names: 110834215

Gene position: 1535030-1536232 (Clockwise)

Preceding gene: 110834214

Following gene: 110834216

Centisome position: 49.2

GC content: 46.97

Gene sequence:

>1203_bases
GTGCTGGAACTCGTAAAGATCCGATTTGATGATTCTAACTATTCATGGACCGTTGTTGATGAGCACGGAAACCCTGTAGA
CGACATCCGTGATTGGATTGTGCATCTTGAACAGATCAATCTCTCTCCCAATACAATCCAGGCATATGCACGTCATGTTG
CTCGCCTTGGGACTTACCTCCACTCAAATAACAAGGAAATCATCGGGATAACTGTTTCCGACTATGATCGTTTCCTTGAG
TGGCTACCTTACTATCTGAACGGTACGGCCGATGTTTCCTCAAATCTTGCCTTTCTTTCTCCTTCATTGGAGCCTGTAGC
TAGGCTGAGCCCAACGGTGAACAATCAGGTGCACCTGGCTGTTAAGTCCTTTTATCGCTATTTGACTGGCAGAGAGCCTG
CTTTTGCATCAGTCGCTGTCAGCAATCGACATCAGCCTGTAGGCAGCTACAAGCCTTTCCTTGAACACATCAATCAACGT
AGAAGTGTCAGGAAGAAAGATCCTTACCTTAAAGGAGATCTGGGGGCCGTAAGGAAGAAAGTAACTGAAAAAAGGATGTC
GCCTGAGGCGGTTCTGGAGCTCATAAAGGCATGCAGCCTGGTCCGTGACGCTTTTCTTGTCACCCTCCTCTACAACACCG
GAATGCGGATCGGCGAAGCTTTGGGGCTTCGCCATGCTGATGTTGACCTAGCAGACGGCGTTATTTGGGTAATTCCACGA
TCTGACAACGAAAATGGAGCCAGGGCTAAATCCAAGCGTGCTAGAGCAATCCCTGTAATGCCTTACCTGCTTGAAATGTA
CGAAGATTATATTACAAGCACAGAATACCTAGCAGCGTTTGAATCAGGGACGGAATATGTGTTCTGTAATGTTAAGAAAG
GCAGGATTGGAAAAGCTCTATCTAGAAGCTATGCCGAGAATCTAAAAACGTATTTAATCAAACGTACGGGCTATACATTT
ACTTGGCACCACTTTCGCCACACACATGCCAGTGAGGCTATCGCTGATGGACACGGGTTGCTAGCCGTCGCTGATCGACT
TGGGCATGCCAGCCCTCAAACAACACTCGATTTTTACAAACACCTCTTTAGTAGTGAAGTCCGAAAATTACATCTGACCG
GCCCAAGCAAGCTGAAGGAGCGGCTTGATGAATTTATGGAATCTGGCGCGCAATTGACTGAGCGAGGCATTAAATGGATT
TAG

Upstream 100 bases:

>100_bases
ATGTCTATGTCCACTATGTACAATATGGGGGTGTGGTTGAGGTTCTGGAAACGGCCAGTCAGTATATGAGCACCTTGTCC
ACTCTGCATGGAAGCAGCTT

Downstream 100 bases:

>100_bases
AGCTGATTTCAAATAATAAAGAAGGCGCTGATTTATATCTGACGCAAATGGAAGCGCGTTTGAATGCTATATCACCAGCA
CTGGTCCAAGAAAACATATG

Product: transposon protein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 400; Mature: 400

Protein sequence:

>400_residues
MLELVKIRFDDSNYSWTVVDEHGNPVDDIRDWIVHLEQINLSPNTIQAYARHVARLGTYLHSNNKEIIGITVSDYDRFLE
WLPYYLNGTADVSSNLAFLSPSLEPVARLSPTVNNQVHLAVKSFYRYLTGREPAFASVAVSNRHQPVGSYKPFLEHINQR
RSVRKKDPYLKGDLGAVRKKVTEKRMSPEAVLELIKACSLVRDAFLVTLLYNTGMRIGEALGLRHADVDLADGVIWVIPR
SDNENGARAKSKRARAIPVMPYLLEMYEDYITSTEYLAAFESGTEYVFCNVKKGRIGKALSRSYAENLKTYLIKRTGYTF
TWHHFRHTHASEAIADGHGLLAVADRLGHASPQTTLDFYKHLFSSEVRKLHLTGPSKLKERLDEFMESGAQLTERGIKWI

Sequences:

>Translated_400_residues
MLELVKIRFDDSNYSWTVVDEHGNPVDDIRDWIVHLEQINLSPNTIQAYARHVARLGTYLHSNNKEIIGITVSDYDRFLE
WLPYYLNGTADVSSNLAFLSPSLEPVARLSPTVNNQVHLAVKSFYRYLTGREPAFASVAVSNRHQPVGSYKPFLEHINQR
RSVRKKDPYLKGDLGAVRKKVTEKRMSPEAVLELIKACSLVRDAFLVTLLYNTGMRIGEALGLRHADVDLADGVIWVIPR
SDNENGARAKSKRARAIPVMPYLLEMYEDYITSTEYLAAFESGTEYVFCNVKKGRIGKALSRSYAENLKTYLIKRTGYTF
TWHHFRHTHASEAIADGHGLLAVADRLGHASPQTTLDFYKHLFSSEVRKLHLTGPSKLKERLDEFMESGAQLTERGIKWI
>Mature_400_residues
MLELVKIRFDDSNYSWTVVDEHGNPVDDIRDWIVHLEQINLSPNTIQAYARHVARLGTYLHSNNKEIIGITVSDYDRFLE
WLPYYLNGTADVSSNLAFLSPSLEPVARLSPTVNNQVHLAVKSFYRYLTGREPAFASVAVSNRHQPVGSYKPFLEHINQR
RSVRKKDPYLKGDLGAVRKKVTEKRMSPEAVLELIKACSLVRDAFLVTLLYNTGMRIGEALGLRHADVDLADGVIWVIPR
SDNENGARAKSKRARAIPVMPYLLEMYEDYITSTEYLAAFESGTEYVFCNVKKGRIGKALSRSYAENLKTYLIKRTGYTF
TWHHFRHTHASEAIADGHGLLAVADRLGHASPQTTLDFYKHLFSSEVRKLHLTGPSKLKERLDEFMESGAQLTERGIKWI

Specific function: One of three proteins encoded by transposon Tn554 required for its transposition [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR023109
- InterPro:   IPR004107 [H]

Pfam domain/function: PF02899 Phage_integr_N; PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 45500; Mature: 45500

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLELVKIRFDDSNYSWTVVDEHGNPVDDIRDWIVHLEQINLSPNTIQAYARHVARLGTYL
CCEEEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
HSNNKEIIGITVSDYDRFLEWLPYYLNGTADVSSNLAFLSPSLEPVARLSPTVNNQVHLA
CCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHCCCCCCCEEHHH
VKSFYRYLTGREPAFASVAVSNRHQPVGSYKPFLEHINQRRSVRKKDPYLKGDLGAVRKK
HHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
VTEKRMSPEAVLELIKACSLVRDAFLVTLLYNTGMRIGEALGLRHADVDLADGVIWVIPR
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCEEEEEEC
SDNENGARAKSKRARAIPVMPYLLEMYEDYITSTEYLAAFESGTEYVFCNVKKGRIGKAL
CCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHCCCCCEEEEECCCCCHHHHH
SRSYAENLKTYLIKRTGYTFTWHHFRHTHASEAIADGHGLLAVADRLGHASPQTTLDFYK
HHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHH
HLFSSEVRKLHLTGPSKLKERLDEFMESGAQLTERGIKWI
HHHHHHHHEEECCCHHHHHHHHHHHHHCCHHHHHCCCCCC
>Mature Secondary Structure
MLELVKIRFDDSNYSWTVVDEHGNPVDDIRDWIVHLEQINLSPNTIQAYARHVARLGTYL
CCEEEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
HSNNKEIIGITVSDYDRFLEWLPYYLNGTADVSSNLAFLSPSLEPVARLSPTVNNQVHLA
CCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHCCCCCCCEEHHH
VKSFYRYLTGREPAFASVAVSNRHQPVGSYKPFLEHINQRRSVRKKDPYLKGDLGAVRKK
HHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
VTEKRMSPEAVLELIKACSLVRDAFLVTLLYNTGMRIGEALGLRHADVDLADGVIWVIPR
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCEEEEEEC
SDNENGARAKSKRARAIPVMPYLLEMYEDYITSTEYLAAFESGTEYVFCNVKKGRIGKAL
CCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHCCCCCEEEEECCCCCHHHHH
SRSYAENLKTYLIKRTGYTFTWHHFRHTHASEAIADGHGLLAVADRLGHASPQTTLDFYK
HHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHH
HLFSSEVRKLHLTGPSKLKERLDEFMESGAQLTERGIKWI
HHHHHHHHEEECCCHHHHHHHHHHHHHCCHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11418146 [H]