Click here to switch to the map view.

The map label for this gene is gspJ [H]

Identifier: 110834178

GI number: 110834178

Start: 1493525

End: 1494184

Strand: Direct

Name: gspJ [H]

Synonym: ABO_1317

Alternate gene names: 110834178

Gene position: 1493525-1494184 (Clockwise)

Preceding gene: 110834177

Following gene: 110834179

Centisome position: 47.87

GC content: 52.58

Gene sequence:

>660_bases
ATGATCAACATCCAGCACGCCACTAGCCGCCAGCGTTCCTTCCAGCACGGTTTTACTCTGCTGGAAATGGTTATCACCAT
CGCGATTTTTGCGTTTATCTATGTCTGGGTGGCAAGCTTTCTTAGTAGCGCACTGCAAGGCCGTGAGCAGCTCAAAGAAG
GTGCAGATGAGATGGAGCGTAACCAGCGGGCGGTGACGTTCCTAACCCTCGACTTCGAGCAGCTAATCAACCGTCCGGTC
AGGGATCCTTATGGTGACCCGCAGCCCGCCATTCTCGGCCGTGACAATTATGTTGAATTTACCCGTTTAGGATGGTCCAA
CCCATTTGGACTGCGTAAGCGTAGCGAAATGCAGCGTGTGGTATACGCTTTAGAAGATGACACCCTGTATCGCCGTTATT
GGCCGGTGCTAGACACTAACGTGGCCACCGAGTACCAGCAGGACGTGCTAATCGACCGTGTGGAGCGCTTCACTGTACGC
TATCTTGATCTCACCCCCCAAGGCGAATGGCAATGGCTGGAGTTGTGGCCAGATGTGAGCATGACGGCAGTACCCGTTTG
GCAGCAACGCCTGCCAAAAAGTATTGAGGTAGAGATCGAACTAGAAAATGGCAACATTGTGCACAGGTATTACCGAACAG
TGGTGAATCCATGGGGATGA

Upstream 100 bases:

>100_bases
ATACCCGCCGGGTAGATATTGAAGTCGGCATGATGCAGGACGATGATCAAGGTCAAATGGCGTATCACCTAGCCAGTCTG
ATCGGGAAACCGGCCTCCGG

Downstream 100 bases:

>100_bases
CGGTAAACCTGTCAGGTCGAATGACTCGAAGGCAAGGGGGCATGGCGTTGGTGATCGTGCTGCTACTGCTAGCCTTACTG
ACGACCATTACCGTTGAAGT

Product: general secretion pathway protein GspJ

Products: NA

Alternate protein names: PilD-dependent protein pddD [H]

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MINIQHATSRQRSFQHGFTLLEMVITIAIFAFIYVWVASFLSSALQGREQLKEGADEMERNQRAVTFLTLDFEQLINRPV
RDPYGDPQPAILGRDNYVEFTRLGWSNPFGLRKRSEMQRVVYALEDDTLYRRYWPVLDTNVATEYQQDVLIDRVERFTVR
YLDLTPQGEWQWLELWPDVSMTAVPVWQQRLPKSIEVEIELENGNIVHRYYRTVVNPWG

Sequences:

>Translated_219_residues
MINIQHATSRQRSFQHGFTLLEMVITIAIFAFIYVWVASFLSSALQGREQLKEGADEMERNQRAVTFLTLDFEQLINRPV
RDPYGDPQPAILGRDNYVEFTRLGWSNPFGLRKRSEMQRVVYALEDDTLYRRYWPVLDTNVATEYQQDVLIDRVERFTVR
YLDLTPQGEWQWLELWPDVSMTAVPVWQQRLPKSIEVEIELENGNIVHRYYRTVVNPWG
>Mature_219_residues
MINIQHATSRQRSFQHGFTLLEMVITIAIFAFIYVWVASFLSSALQGREQLKEGADEMERNQRAVTFLTLDFEQLINRPV
RDPYGDPQPAILGRDNYVEFTRLGWSNPFGLRKRSEMQRVVYALEDDTLYRRYWPVLDTNVATEYQQDVLIDRVERFTVR
YLDLTPQGEWQWLELWPDVSMTAVPVWQQRLPKSIEVEIELENGNIVHRYYRTVVNPWG

Specific function: Involved in a general secretion pathway (GSP) for the export of proteins. Required for the translocation of a variety of enzymes across the outer membrane [H]

COG id: COG4795

COG function: function code U; Type II secretory pathway, component PulJ

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP J family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010055
- InterPro:   IPR012902
- InterPro:   IPR001120 [H]

Pfam domain/function: PF07963 N_methyl [H]

EC number: NA

Molecular weight: Translated: 25948; Mature: 25948

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINIQHATSRQRSFQHGFTLLEMVITIAIFAFIYVWVASFLSSALQGREQLKEGADEMER
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NQRAVTFLTLDFEQLINRPVRDPYGDPQPAILGRDNYVEFTRLGWSNPFGLRKRSEMQRV
CCCEEEEEEECHHHHHCCCCCCCCCCCCCCEECCCCCEEEEECCCCCCCCCCHHHHHHHH
VYALEDDTLYRRYWPVLDTNVATEYQQDVLIDRVERFTVRYLDLTPQGEWQWLELWPDVS
HHHHCCCHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHEEEEECCCCCCEEEEEECCCCC
MTAVPVWQQRLPKSIEVEIELENGNIVHRYYRTVVNPWG
CEEEHHHHHHCCCCEEEEEEECCCCCHHHHHHHHCCCCC
>Mature Secondary Structure
MINIQHATSRQRSFQHGFTLLEMVITIAIFAFIYVWVASFLSSALQGREQLKEGADEMER
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NQRAVTFLTLDFEQLINRPVRDPYGDPQPAILGRDNYVEFTRLGWSNPFGLRKRSEMQRV
CCCEEEEEEECHHHHHCCCCCCCCCCCCCCEECCCCCEEEEECCCCCCCCCCHHHHHHHH
VYALEDDTLYRRYWPVLDTNVATEYQQDVLIDRVERFTVRYLDLTPQGEWQWLELWPDVS
HHHHCCCHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHEEEEECCCCCCEEEEEECCCCC
MTAVPVWQQRLPKSIEVEIELENGNIVHRYYRTVVNPWG
CEEEHHHHHHCCCCEEEEEEECCCCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1588814; 1309616; 10984043 [H]