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The map label for this gene is pilH [H]

Identifier: 110834170

GI number: 110834170

Start: 1487051

End: 1487527

Strand: Direct

Name: pilH [H]

Synonym: ABO_1309

Alternate gene names: 110834170

Gene position: 1487051-1487527 (Clockwise)

Preceding gene: 110834169

Following gene: 110834171

Centisome position: 47.66

GC content: 48.22

Gene sequence:

>477_bases
ATGATTGAGCAGAAGTTGCTATTAGTGGATGATCAGCCAGCTAACTTAGTATCGCTAGAGGCGATTCTGGAAAGTGAAGG
CCGCATCCTTATGAAAGCGCACTCGGGGCAGGAGGCGTTGAAGATTCTGCTTAAGGAAGATATTTCTTTAGTGCTGCTGG
ATGTGCAGATGCCAGGCATGGATGGCTTTGAAGTGGCTGAATTGATGCGTCAACGCAAAGACACCCAGACTATCCCGATT
ATCTTTGTGACGGCGATCAGTAAAGAAAAAAAATACGTTTTCAGGGGCTACCAGGCTGGCGCTGTAGACTACTTATTCAA
ACCATTGGACCCACTGATCCTCAAAAGCAAAGTAGATTTTTTTCTTGGTTTGGATAAACAGAGACGCCAGCTGCAAGCAA
AATTGAAAGAAGCCCAAGCGCACCGTGCGGCCTATGAAGCTGGCAAGACACGGGGCGGGGAGGGCAGCGACCAATAG

Upstream 100 bases:

>100_bases
CGTTTCAGTGGGCAGGAAGAGTCGTTCGATGTTATCAACAAGTCGTTGCGAGTTTTTCGCAAACGGCAGTTTCAACACCA
CGCATGATTAGAGACAACTG

Downstream 100 bases:

>100_bases
TCGTGAATACTTGCATAGGGGGAGTAAAGGCAATTGTTATGGGCGCGTCTTGGGGCGGGCTTAATGCCTATATTCACATT
CTGTCTGTGTTGCCCGCGGA

Product: sensory box protein/response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 158; Mature: 158

Protein sequence:

>158_residues
MIEQKLLLVDDQPANLVSLEAILESEGRILMKAHSGQEALKILLKEDISLVLLDVQMPGMDGFEVAELMRQRKDTQTIPI
IFVTAISKEKKYVFRGYQAGAVDYLFKPLDPLILKSKVDFFLGLDKQRRQLQAKLKEAQAHRAAYEAGKTRGGEGSDQ

Sequences:

>Translated_158_residues
MIEQKLLLVDDQPANLVSLEAILESEGRILMKAHSGQEALKILLKEDISLVLLDVQMPGMDGFEVAELMRQRKDTQTIPI
IFVTAISKEKKYVFRGYQAGAVDYLFKPLDPLILKSKVDFFLGLDKQRRQLQAKLKEAQAHRAAYEAGKTRGGEGSDQ
>Mature_158_residues
MIEQKLLLVDDQPANLVSLEAILESEGRILMKAHSGQEALKILLKEDISLVLLDVQMPGMDGFEVAELMRQRKDTQTIPI
IFVTAISKEKKYVFRGYQAGAVDYLFKPLDPLILKSKVDFFLGLDKQRRQLQAKLKEAQAHRAAYEAGKTRGGEGSDQ

Specific function: May be a part of a signal-transduction system that regulates twitching motility by controlling pilus function (extension and retraction) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI87082012, Length=105, Percent_Identity=34.2857142857143, Blast_Score=65, Evalue=2e-12,
Organism=Escherichia coli, GI1790863, Length=106, Percent_Identity=32.0754716981132, Blast_Score=64, Evalue=4e-12,
Organism=Escherichia coli, GI1789149, Length=107, Percent_Identity=36.4485981308411, Blast_Score=63, Evalue=9e-12,
Organism=Escherichia coli, GI1790437, Length=142, Percent_Identity=33.8028169014084, Blast_Score=62, Evalue=1e-11,
Organism=Escherichia coli, GI145693157, Length=118, Percent_Identity=35.5932203389831, Blast_Score=60, Evalue=1e-10,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 17759; Mature: 17759

Theoretical pI: Translated: 7.68; Mature: 7.68

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEQKLLLVDDQPANLVSLEAILESEGRILMKAHSGQEALKILLKEDISLVLLDVQMPGM
CCCCEEEEECCCCCCHHHHHHHHCCCCCEEEEECCCHHHHHHHHHCCCEEEEEEEECCCC
DGFEVAELMRQRKDTQTIPIIFVTAISKEKKYVFRGYQAGAVDYLFKPLDPLILKSKVDF
CCHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHCCCCCCHHHHHHCCCCHHHHHHHHHH
FLGLDKQRRQLQAKLKEAQAHRAAYEAGKTRGGEGSDQ
HCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MIEQKLLLVDDQPANLVSLEAILESEGRILMKAHSGQEALKILLKEDISLVLLDVQMPGM
CCCCEEEEECCCCCCHHHHHHHHCCCCCEEEEECCCHHHHHHHHHCCCEEEEEEEECCCC
DGFEVAELMRQRKDTQTIPIIFVTAISKEKKYVFRGYQAGAVDYLFKPLDPLILKSKVDF
CCHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHCCCCCCHHHHHHCCCCHHHHHHHHHH
FLGLDKQRRQLQAKLKEAQAHRAAYEAGKTRGGEGSDQ
HCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7908398; 10984043 [H]