| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is cheR [H]
Identifier: 110834169
GI number: 110834169
Start: 1486174
End: 1487037
Strand: Direct
Name: cheR [H]
Synonym: ABO_1308
Alternate gene names: 110834169
Gene position: 1486174-1487037 (Clockwise)
Preceding gene: 110834168
Following gene: 110834170
Centisome position: 47.63
GC content: 48.73
Gene sequence:
>864_bases ATGGCACAAACATGTCCGATTGAGGATGCTGACGTTAGCATCGAAGACATCGAAATTCGCCTGCTGCTTGAGGCGATATA TCAGATGTACGGCTACGATTTTCGTTTCTATAGCCGCGCCTCCATACGTCGCAGGATCATGCATCATCTAACCATGTCTG GCTTTGACTCAATCATGGAGATGACCGATAAGGTGCTGCGCGACCGGTCCTTCTTTACCACCTTATTTAATGAGCTGACG GTGAACGTAACCGAGATGTATCGGGATCCGGATTTCTACCAAAGCTTCCGTGAAGAGGTTATCCCGGTGCTGAAGACGTT CCCGTTTATTAAGATCTGGCACGCAGGCTGCTCCACCGGGGAAGAGATTTACTCCATGGCCATTTTGCTAGAGGAAGAAG GGCTTTACGACCGGGCCATGATCTACGCAACCGATATCGACAAGAAAGTGCTAGCCTCGGCCAAGAAGGGCATTTACTCC ATCGAAGCGGTCAAACAGTATGGTGACAACTATCGGCGGGCCGGTGGTAAGCATTCTTTATCTGACTATTTTACCGCCCG CTATGACAGCGTGATTATGGAGCAGCGACTGAAACGCAATATCGTCTTTGCCGATCATGATCTGGCAACAGACCAGGTTT TTGGTGAAATGCATGTCATCCTGTGCCGGAATGTACTCATCTACTTCAATCGAGCATTACAGGAGCGTGTGATCAAGCTG TTTAGTGACAGTCTAGATATGGGCGGTTACTTGTGCTTGGGAACCAAGGAAAGTTTACGTTTCAGTGGGCAGGAAGAGTC GTTCGATGTTATCAACAAGTCGTTGCGAGTTTTTCGCAAACGGCAGTTTCAACACCACGCATGA
Upstream 100 bases:
>100_bases CGAAGCTGACGTCTTTGCTGCGAGTTTGGTTACATACGTAGTGACTGGAAAATACGCCTGCAGTCACTTTATAAGAACAA GCACCGTGGCGGATAACGTT
Downstream 100 bases:
>100_bases TTAGAGACAACTGATGATTGAGCAGAAGTTGCTATTAGTGGATGATCAGCCAGCTAACTTAGTATCGCTAGAGGCGATTC TGGAAAGTGAAGGCCGCATC
Product: chemotaxis protein methyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 287; Mature: 286
Protein sequence:
>287_residues MAQTCPIEDADVSIEDIEIRLLLEAIYQMYGYDFRFYSRASIRRRIMHHLTMSGFDSIMEMTDKVLRDRSFFTTLFNELT VNVTEMYRDPDFYQSFREEVIPVLKTFPFIKIWHAGCSTGEEIYSMAILLEEEGLYDRAMIYATDIDKKVLASAKKGIYS IEAVKQYGDNYRRAGGKHSLSDYFTARYDSVIMEQRLKRNIVFADHDLATDQVFGEMHVILCRNVLIYFNRALQERVIKL FSDSLDMGGYLCLGTKESLRFSGQEESFDVINKSLRVFRKRQFQHHA
Sequences:
>Translated_287_residues MAQTCPIEDADVSIEDIEIRLLLEAIYQMYGYDFRFYSRASIRRRIMHHLTMSGFDSIMEMTDKVLRDRSFFTTLFNELT VNVTEMYRDPDFYQSFREEVIPVLKTFPFIKIWHAGCSTGEEIYSMAILLEEEGLYDRAMIYATDIDKKVLASAKKGIYS IEAVKQYGDNYRRAGGKHSLSDYFTARYDSVIMEQRLKRNIVFADHDLATDQVFGEMHVILCRNVLIYFNRALQERVIKL FSDSLDMGGYLCLGTKESLRFSGQEESFDVINKSLRVFRKRQFQHHA >Mature_286_residues AQTCPIEDADVSIEDIEIRLLLEAIYQMYGYDFRFYSRASIRRRIMHHLTMSGFDSIMEMTDKVLRDRSFFTTLFNELTV NVTEMYRDPDFYQSFREEVIPVLKTFPFIKIWHAGCSTGEEIYSMAILLEEEGLYDRAMIYATDIDKKVLASAKKGIYSI EAVKQYGDNYRRAGGKHSLSDYFTARYDSVIMEQRLKRNIVFADHDLATDQVFGEMHVILCRNVLIYFNRALQERVIKLF SDSLDMGGYLCLGTKESLRFSGQEESFDVINKSLRVFRKRQFQHHA
Specific function: Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP. CheR is responsible for the chemotactic adaptation to repellents [H]
COG id: COG1352
COG function: function code NT; Methylase of chemotaxis methyl-accepting proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 cheR-type methyltransferase domain [H]
Homologues:
Organism=Escherichia coli, GI1788193, Length=279, Percent_Identity=25.8064516129032, Blast_Score=84, Evalue=1e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022642 - InterPro: IPR000780 - InterPro: IPR022641 [H]
Pfam domain/function: PF01739 CheR; PF03705 CheR_N [H]
EC number: =2.1.1.80 [H]
Molecular weight: Translated: 33647; Mature: 33516
Theoretical pI: Translated: 6.32; Mature: 6.32
Prosite motif: PS50123 CHER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQTCPIEDADVSIEDIEIRLLLEAIYQMYGYDFRFYSRASIRRRIMHHLTMSGFDSIME CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHH MTDKVLRDRSFFTTLFNELTVNVTEMYRDPDFYQSFREEVIPVLKTFPFIKIWHAGCSTG HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHEECCCCCCH EEIYSMAILLEEEGLYDRAMIYATDIDKKVLASAKKGIYSIEAVKQYGDNYRRAGGKHSL HHHHHHHHHEECCCCCCCEEEEEECCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCH SDYFTARYDSVIMEQRLKRNIVFADHDLATDQVFGEMHVILCRNVLIYFNRALQERVIKL HHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FSDSLDMGGYLCLGTKESLRFSGQEESFDVINKSLRVFRKRQFQHHA HHCCCCCCCEEEECCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AQTCPIEDADVSIEDIEIRLLLEAIYQMYGYDFRFYSRASIRRRIMHHLTMSGFDSIME CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHH MTDKVLRDRSFFTTLFNELTVNVTEMYRDPDFYQSFREEVIPVLKTFPFIKIWHAGCSTG HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHEECCCCCCH EEIYSMAILLEEEGLYDRAMIYATDIDKKVLASAKKGIYSIEAVKQYGDNYRRAGGKHSL HHHHHHHHHEECCCCCCCEEEEEECCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCH SDYFTARYDSVIMEQRLKRNIVFADHDLATDQVFGEMHVILCRNVLIYFNRALQERVIKL HHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FSDSLDMGGYLCLGTKESLRFSGQEESFDVINKSLRVFRKRQFQHHA HHCCCCCCCEEEECCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8244966; 9384377; 10568751 [H]