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The map label for this gene is yraR [H]

Identifier: 110834105

GI number: 110834105

Start: 1419867

End: 1420559

Strand: Direct

Name: yraR [H]

Synonym: ABO_1244

Alternate gene names: 110834105

Gene position: 1419867-1420559 (Clockwise)

Preceding gene: 110834104

Following gene: 110834106

Centisome position: 45.51

GC content: 53.82

Gene sequence:

>693_bases
ATGACAAGAAAAGCCTTGCTGCTGGGAGCAACCGGGTTAGTGGGTCGTGATTGCTTAGAAAACCTACTTGCCTGCGATGA
CTATGAAAAGGTAATTGTGCTGACTCGCCGTCCTTTATCGGTGGAGCATCCCAAGCTAGATGTGCAGCGGGTAGATTTCG
ATAATATCGAGGCGCACAAGAATAGCTTCCAAGTTGATGATGTTTTTTGTTGTCTGGGCACGACCATGAAAAAAGCCGGT
TCGCGACAGGCATTTCGGCATGTGGATCATGACCTTGTGGTGCTGGCCGGCAGCATGGCGAGGCGAGCCAATGTGCAGCG
CTTTCTAGTCGTTTCGGCGGTGAGTTCCAATGCTCGCTCGCCGTTTTTCTACTCGCGGGTAAAAGGGCAGATGGAACGCG
CGTTGATCAAGCTCGACCTGCCACTGTTGGCCATTCTGCAGCCGTCACTGTTACGCGGCGAGCGTGAAGACAAGCGCCGG
GCAGAGGACTGGGGCAATATTTTCAATCGAGTGATTGAGCCACTGACACGCTGGACCGATGCCCACTGGCTCCCCGTGGA
CAGCGGCAAGGTGGCTGATGCCATGGTTGGTATGGCATTGATGGGGCCAGATACTGGCTTGTACCGATTGCGTTACCGGG
ATTTTCTGGTGTTTGCCGGCAAGTTCCGCGAGAAAATGAATAAGACAGCCTGA

Upstream 100 bases:

>100_bases
GCATGGATGATTTTCTTGCCAAACCGGTGCATCTTGATGCACTAGAAACAGTATTGCGCCGCTGGCTGCCCGAGCAGCCC
GTCAGAGATGAGGATGAACA

Downstream 100 bases:

>100_bases
AAGGCTTTGGCTACAACCTGAACAAATAACCGAAGGAGTTAGTATGACCTTTGTGACTTGCGATCTTTGTGATGACAACG
CCGATAGCGTTTGCGTGGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 230; Mature: 229

Protein sequence:

>230_residues
MTRKALLLGATGLVGRDCLENLLACDDYEKVIVLTRRPLSVEHPKLDVQRVDFDNIEAHKNSFQVDDVFCCLGTTMKKAG
SRQAFRHVDHDLVVLAGSMARRANVQRFLVVSAVSSNARSPFFYSRVKGQMERALIKLDLPLLAILQPSLLRGEREDKRR
AEDWGNIFNRVIEPLTRWTDAHWLPVDSGKVADAMVGMALMGPDTGLYRLRYRDFLVFAGKFREKMNKTA

Sequences:

>Translated_230_residues
MTRKALLLGATGLVGRDCLENLLACDDYEKVIVLTRRPLSVEHPKLDVQRVDFDNIEAHKNSFQVDDVFCCLGTTMKKAG
SRQAFRHVDHDLVVLAGSMARRANVQRFLVVSAVSSNARSPFFYSRVKGQMERALIKLDLPLLAILQPSLLRGEREDKRR
AEDWGNIFNRVIEPLTRWTDAHWLPVDSGKVADAMVGMALMGPDTGLYRLRYRDFLVFAGKFREKMNKTA
>Mature_229_residues
TRKALLLGATGLVGRDCLENLLACDDYEKVIVLTRRPLSVEHPKLDVQRVDFDNIEAHKNSFQVDDVFCCLGTTMKKAGS
RQAFRHVDHDLVVLAGSMARRANVQRFLVVSAVSSNARSPFFYSRVKGQMERALIKLDLPLLAILQPSLLRGEREDKRRA
EDWGNIFNRVIEPLTRWTDAHWLPVDSGKVADAMVGMALMGPDTGLYRLRYRDFLVFAGKFREKMNKTA

Specific function: Unknown

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To yeast YER004W [H]

Homologues:

Organism=Homo sapiens, GI148728172, Length=190, Percent_Identity=30, Blast_Score=95, Evalue=6e-20,
Organism=Homo sapiens, GI148728168, Length=190, Percent_Identity=30, Blast_Score=95, Evalue=6e-20,
Organism=Homo sapiens, GI148728164, Length=190, Percent_Identity=30, Blast_Score=95, Evalue=6e-20,
Organism=Homo sapiens, GI148728166, Length=190, Percent_Identity=30, Blast_Score=95, Evalue=7e-20,
Organism=Escherichia coli, GI87082218, Length=197, Percent_Identity=39.0862944162437, Blast_Score=129, Evalue=2e-31,
Organism=Caenorhabditis elegans, GI71983631, Length=204, Percent_Identity=35.2941176470588, Blast_Score=115, Evalue=1e-26,
Organism=Saccharomyces cerevisiae, GI6320840, Length=166, Percent_Identity=30.7228915662651, Blast_Score=68, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000534 [H]

Pfam domain/function: PF01118 Semialdhyde_dh [H]

EC number: NA

Molecular weight: Translated: 26094; Mature: 25962

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRKALLLGATGLVGRDCLENLLACDDYEKVIVLTRRPLSVEHPKLDVQRVDFDNIEAHK
CCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCEEECCCCCCHHHC
NSFQVDDVFCCLGTTMKKAGSRQAFRHVDHDLVVLAGSMARRANVQRFLVVSAVSSNARS
CCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCCEEEEHHHHHHHCHHHHEEEEEHHCCCCC
PFFYSRVKGQMERALIKLDLPLLAILQPSLLRGEREDKRRAEDWGNIFNRVIEPLTRWTD
CHHHHHHHHHHHHHHHHHCCHHHHHHCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
AHWLPVDSGKVADAMVGMALMGPDTGLYRLRYRDFLVFAGKFREKMNKTA
CCEEECCCCCHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TRKALLLGATGLVGRDCLENLLACDDYEKVIVLTRRPLSVEHPKLDVQRVDFDNIEAHK
CCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCEEECCCCCCHHHC
NSFQVDDVFCCLGTTMKKAGSRQAFRHVDHDLVVLAGSMARRANVQRFLVVSAVSSNARS
CCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCCEEEEHHHHHHHCHHHHEEEEEHHCCCCC
PFFYSRVKGQMERALIKLDLPLLAILQPSLLRGEREDKRRAEDWGNIFNRVIEPLTRWTD
CHHHHHHHHHHHHHHHHHCCHHHHHHCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
AHWLPVDSGKVADAMVGMALMGPDTGLYRLRYRDFLVFAGKFREKMNKTA
CCEEECCCCCHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]