The gene/protein map for NC_008260 is currently unavailable.
Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

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The map label for this gene is 110834045

Identifier: 110834045

GI number: 110834045

Start: 1344684

End: 1345352

Strand: Direct

Name: 110834045

Synonym: ABO_1184

Alternate gene names: NA

Gene position: 1344684-1345352 (Clockwise)

Preceding gene: 110834042

Following gene: 110834046

Centisome position: 43.1

GC content: 54.86

Gene sequence:

>669_bases
ATGACCCCATTCAAGGATTTATTGGCGCTGGCGGTGAACCGTAAAGGTTCACTAAAGGCTGTGCAGGCTCAGCTGCCCAC
GGTGGCCGATTCAGATACTTTGCGCCATCGTGATGATGCATTTTATATGTCTGCGTTGACTCGCCGCATTTTCCGAGCCG
GGCTGAAGCATTCCCTGGTGGACAATAAATGGCCTGCCTTTGAGAAGGCTTTTTTCGGCTTTGACCCACAAAAGCTAGTG
TTAATGCCGGACACCATGCTTGATGACCGTATGCAGGACACTAGCCTGATTCGCCACTGGGGCAAGATGAAAGCGATCCG
CCATAACGCTCAGTTGGTCCTCGACTTGGCAGAAGAGTACGGCAGTGTGGGGAACTGGCTGGCGGACTGGCCGGTGGACG
ATATCGTGGGTATGTGGTGGTTGCTGAAAAAACGGGGCAAGCAACTGGGAGGTAATTCTGGGGCGGCTTTCTTGCGTATG
GTAGGCCGCGATACGTGGTATCCCACCGCCGATGTAGTGGCTGCTCTAAAGGCACAAAATATCATCGACAAGCCGCCAGC
AAGCCAGCGAGACCAAAAGGCTGCCCAGGCCGCCTTCAACACGTGGCAAAGGGAAAGCGGTTGGCCGCAGTCCCATATCA
GCAAGGTGCTGGCCTTTACTGTGGGCTGA

Upstream 100 bases:

>100_bases
CCGCAGGTCGACTCGAAGAGGACAGGGGAGTGATTCTACAATGCGTCCTTTTCACTGTATATCTGGCGCTTAGATGCAAT
GGCGCAAACTGGAGTAGGGC

Downstream 100 bases:

>100_bases
GCGGCGACGGAACCTCTGTTCCTTATTAAGGGTCCCGATTCCCTTGATGCAGGCGTGAACATAAATGATAATGACTCGTC
TTTAATGTTATGAATTGGGT

Product: hypothetical protein

Products: NA

Alternate protein names: DNA-3-Methyladenine Glycosylase; 3-Methyladenine DNA Glycosylase-Like Protein; 3-Methyl-Adenine DNA Glycosylase; DNA Glycosylase Protein; DNA-3-Methyladenine Glycosylase I; DNA-Glycosylase

Number of amino acids: Translated: 222; Mature: 221

Protein sequence:

>222_residues
MTPFKDLLALAVNRKGSLKAVQAQLPTVADSDTLRHRDDAFYMSALTRRIFRAGLKHSLVDNKWPAFEKAFFGFDPQKLV
LMPDTMLDDRMQDTSLIRHWGKMKAIRHNAQLVLDLAEEYGSVGNWLADWPVDDIVGMWWLLKKRGKQLGGNSGAAFLRM
VGRDTWYPTADVVAALKAQNIIDKPPASQRDQKAAQAAFNTWQRESGWPQSHISKVLAFTVG

Sequences:

>Translated_222_residues
MTPFKDLLALAVNRKGSLKAVQAQLPTVADSDTLRHRDDAFYMSALTRRIFRAGLKHSLVDNKWPAFEKAFFGFDPQKLV
LMPDTMLDDRMQDTSLIRHWGKMKAIRHNAQLVLDLAEEYGSVGNWLADWPVDDIVGMWWLLKKRGKQLGGNSGAAFLRM
VGRDTWYPTADVVAALKAQNIIDKPPASQRDQKAAQAAFNTWQRESGWPQSHISKVLAFTVG
>Mature_221_residues
TPFKDLLALAVNRKGSLKAVQAQLPTVADSDTLRHRDDAFYMSALTRRIFRAGLKHSLVDNKWPAFEKAFFGFDPQKLVL
MPDTMLDDRMQDTSLIRHWGKMKAIRHNAQLVLDLAEEYGSVGNWLADWPVDDIVGMWWLLKKRGKQLGGNSGAAFLRMV
GRDTWYPTADVVAALKAQNIIDKPPASQRDQKAAQAAFNTWQRESGWPQSHISKVLAFTVG

Specific function: Unknown

COG id: COG2818

COG function: function code L; 3-methyladenine DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25037; Mature: 24906

Theoretical pI: Translated: 10.33; Mature: 10.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPFKDLLALAVNRKGSLKAVQAQLPTVADSDTLRHRDDAFYMSALTRRIFRAGLKHSLV
CCCHHHHHHHHHCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DNKWPAFEKAFFGFDPQKLVLMPDTMLDDRMQDTSLIRHWGKMKAIRHNAQLVLDLAEEY
CCCCCHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GSVGNWLADWPVDDIVGMWWLLKKRGKQLGGNSGAAFLRMVGRDTWYPTADVVAALKAQN
CCCCCCHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHH
IIDKPPASQRDQKAAQAAFNTWQRESGWPQSHISKVLAFTVG
HHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
TPFKDLLALAVNRKGSLKAVQAQLPTVADSDTLRHRDDAFYMSALTRRIFRAGLKHSLV
CCHHHHHHHHHCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DNKWPAFEKAFFGFDPQKLVLMPDTMLDDRMQDTSLIRHWGKMKAIRHNAQLVLDLAEEY
CCCCCHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GSVGNWLADWPVDDIVGMWWLLKKRGKQLGGNSGAAFLRMVGRDTWYPTADVVAALKAQN
CCCCCCHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHH
IIDKPPASQRDQKAAQAAFNTWQRESGWPQSHISKVLAFTVG
HHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA