| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is fabZ [H]
Identifier: 110834015
GI number: 110834015
Start: 1312014
End: 1312463
Strand: Direct
Name: fabZ [H]
Synonym: ABO_1154
Alternate gene names: 110834015
Gene position: 1312014-1312463 (Clockwise)
Preceding gene: 110834014
Following gene: 110834016
Centisome position: 42.05
GC content: 46.44
Gene sequence:
>450_bases TTGGAACACATGATGATGGACATTAAAGAGGTCAGGGAATATCTGCCCCATCGTTACCCCTTTCTGTTAATTGACCGGGT GCTAAATATTGAGCCCGGAAAACGTATCGAAGCGTTAAAAAACGTGACGATCAACGAGCCATTTTTTAATGGCCATTTTC CTGAAGAGCCTATCATGCCCGGTGTGTTGATCATCGAAGCCATGGCGCAGGCTGCAGGTATTTTGGGGTTCGTGACGGAG AATAAAAAGCCCTCCGATGGTTATATCTATCTACTTGTGGGTACCGACAAGGCACGCTTTAAGCGCCAGGTAGTGCCGGG AGATACTCTGCATTTGTTCGCCGAGTATGTGGTGATTAAACGTAATATTATAAAATTCACCTGTGAAGCGCAGGTAGACG GTAAAACTGTGGCCAGTGCAGAAATGCTCGTGGCTGAACAGAAAGTCTAG
Upstream 100 bases:
>100_bases GAATGTGGCGCGTTTCCGAAATCTGGATGATTTGGCCCGCCGTGTACGCAAGCTCGAGCGTTTAAGCGACTAATTTCCGC ATGTTGCGGTACTTGCCTGT
Downstream 100 bases:
>100_bases TCCATACCGTACGCCAGCGCGGAGCTGGCGTATACTTGCTTGCCTTCACCACCAAAATAAAAGTGACTAGTCCATGATTC ATCCGACCGCCCTTATTGAT
Product: (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase
Products: NA
Alternate protein names: (3R)-hydroxymyristoyl ACP dehydrase [H]
Number of amino acids: Translated: 149; Mature: 149
Protein sequence:
>149_residues MEHMMMDIKEVREYLPHRYPFLLIDRVLNIEPGKRIEALKNVTINEPFFNGHFPEEPIMPGVLIIEAMAQAAGILGFVTE NKKPSDGYIYLLVGTDKARFKRQVVPGDTLHLFAEYVVIKRNIIKFTCEAQVDGKTVASAEMLVAEQKV
Sequences:
>Translated_149_residues MEHMMMDIKEVREYLPHRYPFLLIDRVLNIEPGKRIEALKNVTINEPFFNGHFPEEPIMPGVLIIEAMAQAAGILGFVTE NKKPSDGYIYLLVGTDKARFKRQVVPGDTLHLFAEYVVIKRNIIKFTCEAQVDGKTVASAEMLVAEQKV >Mature_149_residues MEHMMMDIKEVREYLPHRYPFLLIDRVLNIEPGKRIEALKNVTINEPFFNGHFPEEPIMPGVLIIEAMAQAAGILGFVTE NKKPSDGYIYLLVGTDKARFKRQVVPGDTLHLFAEYVVIKRNIIKFTCEAQVDGKTVASAEMLVAEQKV
Specific function: Involved in saturated fatty acids biosynthesis [H]
COG id: COG0764
COG function: function code I; 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thioester dehydratase family. FabZ subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786377, Length=143, Percent_Identity=51.0489510489511, Blast_Score=150, Evalue=4e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013114 - InterPro: IPR010084 [H]
Pfam domain/function: PF07977 FabA [H]
EC number: 4.2.1.-
Molecular weight: Translated: 16947; Mature: 16947
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEHMMMDIKEVREYLPHRYPFLLIDRVLNIEPGKRIEALKNVTINEPFFNGHFPEEPIMP CCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCC GVLIIEAMAQAAGILGFVTENKKPSDGYIYLLVGTDKARFKRQVVPGDTLHLFAEYVVIK HHHHHHHHHHHHCEEEEEECCCCCCCCEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHH RNIIKFTCEAQVDGKTVASAEMLVAEQKV HCEEEEEEECCCCCCCHHHHHHHHHCCCC >Mature Secondary Structure MEHMMMDIKEVREYLPHRYPFLLIDRVLNIEPGKRIEALKNVTINEPFFNGHFPEEPIMP CCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCC GVLIIEAMAQAAGILGFVTENKKPSDGYIYLLVGTDKARFKRQVVPGDTLHLFAEYVVIK HHHHHHHHHHHHCEEEEEECCCCCCCCEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHH RNIIKFTCEAQVDGKTVASAEMLVAEQKV HCEEEEEEECCCCCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Carbon-Oxygen Lyases; Hydro-Lyases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA