| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is 110833986
Identifier: 110833986
GI number: 110833986
Start: 1277764
End: 1278150
Strand: Direct
Name: 110833986
Synonym: ABO_1125
Alternate gene names: NA
Gene position: 1277764-1278150 (Clockwise)
Preceding gene: 110833985
Following gene: 110833988
Centisome position: 40.95
GC content: 51.16
Gene sequence:
>387_bases ATGAGCCTCGAATTTTTGTCTGACGAATGGTTTGCAAAAGTAAAAGAGATCCGTGAAGGCGCGGGTAACCTTGAAACGCC AGCAGCGTTGGCTGACTTGGTGATCAACATCAGCGTTAATGCTGATGGTGACGATAAAAAGCTGGCTTTGGTTGGCGGCA TGATTGAAGAAGGTCATCACGCTGACGCTCCGACTACCATGATTCTGCCGGCCGACTTGGCCAAGCGCATCTTCATCGAA GGTGACCAGTCTGCAGGCATGCAAGGCTTTATGAGCGGCCAGATTCGCGTTGAAGGCGACATGAGTAAACTGATGGCTTT GCAAACCGCACAGCCTTCTGCTGATCAGCTTGCCATGATGAAGCAGATCCAGGACGTGACTGCCTAA
Upstream 100 bases:
>100_bases TTCGAACGCTCGTTTGAATTGGCTCGCAGCAACAAAGACTGTGCCAGCCCTGTGAGAGGGGGCGTCGAAGTTACATCGAT AGGTTTAAGGAGAAACGAAA
Downstream 100 bases:
>100_bases TATTGGCAATCCGATCTGAAAAATGCCCGCCTTGTGCGGGCATTTTTTTGAAAACGCACAATGTCCCATGCTCGGGGCAT TGTGCGCGTTAGCTATTCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 128; Mature: 127
Protein sequence:
>128_residues MSLEFLSDEWFAKVKEIREGAGNLETPAALADLVINISVNADGDDKKLALVGGMIEEGHHADAPTTMILPADLAKRIFIE GDQSAGMQGFMSGQIRVEGDMSKLMALQTAQPSADQLAMMKQIQDVTA
Sequences:
>Translated_128_residues MSLEFLSDEWFAKVKEIREGAGNLETPAALADLVINISVNADGDDKKLALVGGMIEEGHHADAPTTMILPADLAKRIFIE GDQSAGMQGFMSGQIRVEGDMSKLMALQTAQPSADQLAMMKQIQDVTA >Mature_127_residues SLEFLSDEWFAKVKEIREGAGNLETPAALADLVINISVNADGDDKKLALVGGMIEEGHHADAPTTMILPADLAKRIFIEG DQSAGMQGFMSGQIRVEGDMSKLMALQTAQPSADQLAMMKQIQDVTA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13720; Mature: 13589
Theoretical pI: Translated: 4.19; Mature: 4.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 7.0 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 6.3 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLEFLSDEWFAKVKEIREGAGNLETPAALADLVINISVNADGDDKKLALVGGMIEEGHH CCCCCCCHHHHHHHHHHHHCCCCCCCHHHHEEEEEEEEECCCCCCCEEEEECCHHHCCCC ADAPTTMILPADLAKRIFIEGDQSAGMQGFMSGQIRVEGDMSKLMALQTAQPSADQLAMM CCCCEEEEECHHHHHHEEEECCCCCCCCCCCCCEEEECCCHHHHHHHHCCCCCHHHHHHH KQIQDVTA HHHHHHCC >Mature Secondary Structure SLEFLSDEWFAKVKEIREGAGNLETPAALADLVINISVNADGDDKKLALVGGMIEEGHH CCCCCCHHHHHHHHHHHHCCCCCCCHHHHEEEEEEEEECCCCCCCEEEEECCHHHCCCC ADAPTTMILPADLAKRIFIEGDQSAGMQGFMSGQIRVEGDMSKLMALQTAQPSADQLAMM CCCCEEEEECHHHHHHEEEECCCCCCCCCCCCCEEEECCCHHHHHHHHCCCCCHHHHHHH KQIQDVTA HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA