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The map label for this gene is rmuC [H]

Identifier: 110833939

GI number: 110833939

Start: 1219129

End: 1220445

Strand: Direct

Name: rmuC [H]

Synonym: ABO_1078

Alternate gene names: 110833939

Gene position: 1219129-1220445 (Clockwise)

Preceding gene: 110833938

Following gene: 110833940

Centisome position: 39.07

GC content: 54.52

Gene sequence:

>1317_bases
ATGAACCTGTATGCAATGCTGGCGCTGGCAGCGCTAGGTGGTGGTGTAGTGGCAGCGTTGCTTGTGGCGTTGCTGGAGCG
GCGCCGAGCGGCTGCGCGTGAAGCCGTATTGCTGGCCGAGAAAAATGCTCTGAGCGAGCCGCTGGCCCAGGTACCGCTGC
TCAAGCAGCAGCTACAAGAACAGCAACAACGGCAGCAGCACACGGACGCACAGCTACAGCAGTTGGGAGCCGATAAGGCC
CGGCTGGAAGAACGGCTGGCTGGGCAGCAGGAAAAGTTGGCCTTCTCCGAGCAAAGCCGAAATCAGCTGAAGCAGGAGTT
TGAGAACCTGTCCGGGAAAGTACTGGAGCAGCGCGGCAAGCAATTACAGGAGCAACACCAGCAGGGCCTTGATGGCATGC
TCAAACCGTTCCGTGAGCAGCTGGCGGATTTTCGCCGTCGGGTGGATCAAATTCACAGCGACGAAACCCGTGCTCAGGCA
TCCCTGATCGAACAGTTGGGCCATTTGAAAAGCCTTAATCAGCAGATGCATGAAGATGCGCGCAATCTCACCGACGCCTT
AAAAGGCCAGTCCAAGACCCAGGGTAATTGGGGTGAGATGATTTTGGAGCGAGTGCTAGAGTCTTCCGGCCTGACCCGGG
GCCGTGAATACGAAACCCAGGTTACGTTGAAGGATGAGAGCGGCCAGCGACGGCTGCCGGATGCTATTGTGCACCTGCCG
GAAAATAAGGATGTGGTGATCGACGCGAAAGTATCGTTGGTGGCCTATGAGCGGCTTTCTTCTGCCTCTACGGCGGAGGA
GCGCGAACAGGCATTACGCGACCATCTGGCCTCCCTACGCAGTCATATTAAAGGCTTAGATGCGAAGGATTACAGCGGTC
TGGAAGGTATTCGGAGCCTGGATTTTGTGCTGCTTTTTATTCCCATTGAGGGAGCGTTCATGGTGGCCATGGAGCAAGAT
CATCGCCTTTATTCTGACGCCTTTTCTCGCAACATAGTATTGGTTAGTCCAACTACGTTATTGGTAACGTTGCGCACGAT
CCAGAATATTTGGCGTTATGAGTACCAAAACCAGAATGCGTTAGATATCGCTGATCGTGCCGGGAAAATTTGTGATCAGG
TGTCGCTGATTGGCGATTCCATGGATGATCTCGGTGACAAAATCGGTAAGGCACAATCTGCGTGGGATACCACTTTTAAG
CGTCTCAGTAGTGGCCGTGGCAACCTATATCGCCAGGCGCAACAACTCAAAGAGCTGGGGGCAAAAGCGCGTAGAGCGTT
ACCCGCCCCCGCTGATGAACAGCAAGGGGAATCATAA

Upstream 100 bases:

>100_bases
AGGTGGCTGAATGTGTGGCAGCACTGCAGGGGATCAGTGTGGATGCTCTGGCGGCGGCCACCACGAATAACTTCTTTTCT
CTGTTCAACAAGGCACAAGC

Downstream 100 bases:

>100_bases
GAAAAAAGGCTCATCAGTCCGTCAGAATGCACGGAAAGTACGATATTTCTGCTCAATATAAAAGGTATTGCACATAAAAT
AAGTGCATTTCAATTATTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 438; Mature: 438

Protein sequence:

>438_residues
MNLYAMLALAALGGGVVAALLVALLERRRAAAREAVLLAEKNALSEPLAQVPLLKQQLQEQQQRQQHTDAQLQQLGADKA
RLEERLAGQQEKLAFSEQSRNQLKQEFENLSGKVLEQRGKQLQEQHQQGLDGMLKPFREQLADFRRRVDQIHSDETRAQA
SLIEQLGHLKSLNQQMHEDARNLTDALKGQSKTQGNWGEMILERVLESSGLTRGREYETQVTLKDESGQRRLPDAIVHLP
ENKDVVIDAKVSLVAYERLSSASTAEEREQALRDHLASLRSHIKGLDAKDYSGLEGIRSLDFVLLFIPIEGAFMVAMEQD
HRLYSDAFSRNIVLVSPTTLLVTLRTIQNIWRYEYQNQNALDIADRAGKICDQVSLIGDSMDDLGDKIGKAQSAWDTTFK
RLSSGRGNLYRQAQQLKELGAKARRALPAPADEQQGES

Sequences:

>Translated_438_residues
MNLYAMLALAALGGGVVAALLVALLERRRAAAREAVLLAEKNALSEPLAQVPLLKQQLQEQQQRQQHTDAQLQQLGADKA
RLEERLAGQQEKLAFSEQSRNQLKQEFENLSGKVLEQRGKQLQEQHQQGLDGMLKPFREQLADFRRRVDQIHSDETRAQA
SLIEQLGHLKSLNQQMHEDARNLTDALKGQSKTQGNWGEMILERVLESSGLTRGREYETQVTLKDESGQRRLPDAIVHLP
ENKDVVIDAKVSLVAYERLSSASTAEEREQALRDHLASLRSHIKGLDAKDYSGLEGIRSLDFVLLFIPIEGAFMVAMEQD
HRLYSDAFSRNIVLVSPTTLLVTLRTIQNIWRYEYQNQNALDIADRAGKICDQVSLIGDSMDDLGDKIGKAQSAWDTTFK
RLSSGRGNLYRQAQQLKELGAKARRALPAPADEQQGES
>Mature_438_residues
MNLYAMLALAALGGGVVAALLVALLERRRAAAREAVLLAEKNALSEPLAQVPLLKQQLQEQQQRQQHTDAQLQQLGADKA
RLEERLAGQQEKLAFSEQSRNQLKQEFENLSGKVLEQRGKQLQEQHQQGLDGMLKPFREQLADFRRRVDQIHSDETRAQA
SLIEQLGHLKSLNQQMHEDARNLTDALKGQSKTQGNWGEMILERVLESSGLTRGREYETQVTLKDESGQRRLPDAIVHLP
ENKDVVIDAKVSLVAYERLSSASTAEEREQALRDHLASLRSHIKGLDAKDYSGLEGIRSLDFVLLFIPIEGAFMVAMEQD
HRLYSDAFSRNIVLVSPTTLLVTLRTIQNIWRYEYQNQNALDIADRAGKICDQVSLIGDSMDDLGDKIGKAQSAWDTTFK
RLSSGRGNLYRQAQQLKELGAKARRALPAPADEQQGES

Specific function: Involved in DNA recombination [H]

COG id: COG1322

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rmuC family [H]

Homologues:

Organism=Escherichia coli, GI1790266, Length=439, Percent_Identity=41.4578587699317, Blast_Score=332, Evalue=3e-92,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003798 [H]

Pfam domain/function: PF02646 RmuC [H]

EC number: NA

Molecular weight: Translated: 49160; Mature: 49160

Theoretical pI: Translated: 6.45; Mature: 6.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLYAMLALAALGGGVVAALLVALLERRRAAAREAVLLAEKNALSEPLAQVPLLKQQLQE
CHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QQQRQQHTDAQLQQLGADKARLEERLAGQQEKLAFSEQSRNQLKQEFENLSGKVLEQRGK
HHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLQEQHQQGLDGMLKPFREQLADFRRRVDQIHSDETRAQASLIEQLGHLKSLNQQMHEDA
HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH
RNLTDALKGQSKTQGNWGEMILERVLESSGLTRGREYETQVTLKDESGQRRLPDAIVHLP
HHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCHHHEECC
ENKDVVIDAKVSLVAYERLSSASTAEEREQALRDHLASLRSHIKGLDAKDYSGLEGIRSL
CCCCEEEECHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
DFVLLFIPIEGAFMVAMEQDHRLYSDAFSRNIVLVSPTTLLVTLRTIQNIWRYEYQNQNA
HHEEEEEECCCEEEEEEHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHCCCCC
LDIADRAGKICDQVSLIGDSMDDLGDKIGKAQSAWDTTFKRLSSGRGNLYRQAQQLKELG
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
AKARRALPAPADEQQGES
HHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MNLYAMLALAALGGGVVAALLVALLERRRAAAREAVLLAEKNALSEPLAQVPLLKQQLQE
CHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QQQRQQHTDAQLQQLGADKARLEERLAGQQEKLAFSEQSRNQLKQEFENLSGKVLEQRGK
HHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLQEQHQQGLDGMLKPFREQLADFRRRVDQIHSDETRAQASLIEQLGHLKSLNQQMHEDA
HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH
RNLTDALKGQSKTQGNWGEMILERVLESSGLTRGREYETQVTLKDESGQRRLPDAIVHLP
HHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCHHHEECC
ENKDVVIDAKVSLVAYERLSSASTAEEREQALRDHLASLRSHIKGLDAKDYSGLEGIRSL
CCCCEEEECHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
DFVLLFIPIEGAFMVAMEQDHRLYSDAFSRNIVLVSPTTLLVTLRTIQNIWRYEYQNQNA
HHEEEEEECCCEEEEEEHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHCCCCC
LDIADRAGKICDQVSLIGDSMDDLGDKIGKAQSAWDTTFKRLSSGRGNLYRQAQQLKELG
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
AKARRALPAPADEQQGES
HHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]