| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is 110833900
Identifier: 110833900
GI number: 110833900
Start: 1180064
End: 1180300
Strand: Direct
Name: 110833900
Synonym: ABO_1039
Alternate gene names: NA
Gene position: 1180064-1180300 (Clockwise)
Preceding gene: 110833899
Following gene: 110833901
Centisome position: 37.82
GC content: 52.32
Gene sequence:
>237_bases ATGTTCATGACTATTGTGGCGGCAGTAATTTTTATTGGCCTGCTTTTCGCCGGCATGGCTGTGGGCGTGATTCTCTCCAA CAAGCCGGTAAAGGGATCCTGTGGTGGCCTGGCGGCGCTGGGCATGAAGCAGGACTGTGAAATTTGCGGCGGTAATGATG ACGAATGCGAAGAGAACGCTCGCAAGGTTAACAGCGAAAAAGCGGCGGCACTGGGTAAGAACGTGATGAAGATCTAA
Upstream 100 bases:
>100_bases AAAGACCATGAACTGGCCGTATTTTTTATTGTCAGAACTGAGAAGGGAGTGAAAGAGTTATCGACTCCTGCGTTTGATGC AATTGTGGAGGGTAAGTGAC
Downstream 100 bases:
>100_bases TTCCAAGCCCGCCCACAAAAGAACCCGCTCCATGCGGGTTTTTTTATGTCTGACTATCTGCCGTAGGCGCGCCGCGAGCG CGGCGATTACGGCAAGGTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 78; Mature: 78
Protein sequence:
>78_residues MFMTIVAAVIFIGLLFAGMAVGVILSNKPVKGSCGGLAALGMKQDCEICGGNDDECEENARKVNSEKAAALGKNVMKI
Sequences:
>Translated_78_residues MFMTIVAAVIFIGLLFAGMAVGVILSNKPVKGSCGGLAALGMKQDCEICGGNDDECEENARKVNSEKAAALGKNVMKI >Mature_78_residues MFMTIVAAVIFIGLLFAGMAVGVILSNKPVKGSCGGLAALGMKQDCEICGGNDDECEENARKVNSEKAAALGKNVMKI
Specific function: Unknown
COG id: COG2991
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8064; Mature: 8064
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.1 %Cys (Translated Protein) 6.4 %Met (Translated Protein) 11.5 %Cys+Met (Translated Protein) 5.1 %Cys (Mature Protein) 6.4 %Met (Mature Protein) 11.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFMTIVAAVIFIGLLFAGMAVGVILSNKPVKGSCGGLAALGMKQDCEICGGNDDECEENA CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHH RKVNSEKAAALGKNVMKI HHCCHHHHHHHHHHHHCC >Mature Secondary Structure MFMTIVAAVIFIGLLFAGMAVGVILSNKPVKGSCGGLAALGMKQDCEICGGNDDECEENA CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHH RKVNSEKAAALGKNVMKI HHCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA