Click here to switch to the map view.

The map label for this gene is 110833901

Identifier: 110833901

GI number: 110833901

Start: 1181674

End: 1182843

Strand: Direct

Name: 110833901

Synonym: ABO_1041

Alternate gene names: NA

Gene position: 1181674-1182843 (Clockwise)

Preceding gene: 110833900

Following gene: 110833904

Centisome position: 37.87

GC content: 54.87

Gene sequence:

>1170_bases
ATGCACAAACAGGATCCGGTCAGAGGATTGATATTGTCGGGCGGCGGTGCACGTGGCGCTTACCAGGTAGGCGTCCTAGC
GGCGATAGCGGAAATGATTCCCCGTGGCGCGCCGAACCCCTTTCCGATTATCTGTGGCACCTCGGCGGGGGCGATCAATG
CAACGGCTTTAGCGGCGAATGCGGGTAACTATCGGGCGGCGGTCCGAGGCTTGGAGAGAGTCTGGTCCAATATTACCGCC
GAACAGGTGTATCGCACGGACCTCTATGCCTGCATCCGTGGCGTGTTGCGTTGGTTTTTTTCTGGTGTGGCGACGGGCAA
AACTCCGGAGCGAAGTTCGTTGCTTGATAATACGCCGTTACAACGCTTGCTATCGCTAGTGATTAATTTTCGCCGTATTC
AGGAGAGCTTGGATCAGGGGCATTTGCGGGCACTGGCCATTACTGCTTCGGCCTATGCAAGCGGTGAATCAGTGAGCTTT
TATCAGGGCACCGATGAGCTTGCCGAATGGGCTCGCGCTCGCCGTAAGGGTAAGCGTTCGCAAATTGGGGTAGAGCATTT
GTTGGGATCGGCGGCCATTCCTATCCTGTTTCCTGCGACTAAGGTGGACAAGGCTTATTATGGTGATGGAGCGCTGCGTC
AGCTTGCTCCATTAAGCCCCGCGCTGCATTTGGGCGCTACGCGGCTACTGGTAATTGGTGTGTCTGGTAATGTGAGTGCA
GGGCATCTACGTCAGCTAAGCGGGTACCCTTCAATGGCCCAGGTGCTGGGGCACGTGCTTAATAGTGTGTTTGTCGACAC
GCTGGAAGGGGATGTTGAGCGGCTTGAGCGCATTAATCACACACTGTCGGCCCTGGGAGAGCGGGCGCGCAGGAAAAAAG
ATATCAAGCTGCGAGAAGTGGATGTACTAAAGATTTATCCCTCTCGGCCCATTGATGAAATCGCGGCGGAGCATATTCGG
GAATTACCTCGATCCTTGCGGTTTTTTCTGCGCAGTTCCGGAGCGACTCGCTCTCCTGGTGCCAGTGCTATGAGCTATTT
GTTATTTGAGCCTGGGTTCACCAATGCATTGATTGAAATGGGGCGCAAAGATGCGACGGCCCGTAAAGATGAGATCATGG
CGTTCCTAAATGATCAGCCACTAATGGAGACGGCTTCCGAGGCCCCGTAA

Upstream 100 bases:

>100_bases
AGGTAGCGGGTATTGCCTTGCCAGCATTATTGATGCGGCGAGTAGTGGTGGCGTGGCGGTTAGCGCGGCATACTGAAAAC
AACAAACAGGGAGGGTATCA

Downstream 100 bases:

>100_bases
CGCTGTTTGCGGCGGAAGTGGCTGACAAAGCTGGTGGGGAAGTCGGTGATGATGCTGTTTACCTTTAGTTTTGCCAGCCG
CTCGGCTTCTGTCAGGTCGT

Product: hypothetical protein

Products: NA

Alternate protein names: Patatin Family Protein; Alpha-Beta Hydrolase Family Esterase; Phospholipase Patatin Family; Patatin-Like Phospholipase Family; Patatin Like Phospholipase; Alpha/Beta Hydrolase; Patatin-Like Phospholipase; Esterase; Patatin Family Phospholipase; Patatin-Like Phospholipase Family Protein; Lipid Acyl Hydrolase; Esterase Of Alpha-Beta Hydrolase Superfamily Protein; Phospholipase Patatin Family Protein; Phospholipase; Alpha-Beta Hydrolase Superfamily Protein

Number of amino acids: Translated: 389; Mature: 389

Protein sequence:

>389_residues
MHKQDPVRGLILSGGGARGAYQVGVLAAIAEMIPRGAPNPFPIICGTSAGAINATALAANAGNYRAAVRGLERVWSNITA
EQVYRTDLYACIRGVLRWFFSGVATGKTPERSSLLDNTPLQRLLSLVINFRRIQESLDQGHLRALAITASAYASGESVSF
YQGTDELAEWARARRKGKRSQIGVEHLLGSAAIPILFPATKVDKAYYGDGALRQLAPLSPALHLGATRLLVIGVSGNVSA
GHLRQLSGYPSMAQVLGHVLNSVFVDTLEGDVERLERINHTLSALGERARRKKDIKLREVDVLKIYPSRPIDEIAAEHIR
ELPRSLRFFLRSSGATRSPGASAMSYLLFEPGFTNALIEMGRKDATARKDEIMAFLNDQPLMETASEAP

Sequences:

>Translated_389_residues
MHKQDPVRGLILSGGGARGAYQVGVLAAIAEMIPRGAPNPFPIICGTSAGAINATALAANAGNYRAAVRGLERVWSNITA
EQVYRTDLYACIRGVLRWFFSGVATGKTPERSSLLDNTPLQRLLSLVINFRRIQESLDQGHLRALAITASAYASGESVSF
YQGTDELAEWARARRKGKRSQIGVEHLLGSAAIPILFPATKVDKAYYGDGALRQLAPLSPALHLGATRLLVIGVSGNVSA
GHLRQLSGYPSMAQVLGHVLNSVFVDTLEGDVERLERINHTLSALGERARRKKDIKLREVDVLKIYPSRPIDEIAAEHIR
ELPRSLRFFLRSSGATRSPGASAMSYLLFEPGFTNALIEMGRKDATARKDEIMAFLNDQPLMETASEAP
>Mature_389_residues
MHKQDPVRGLILSGGGARGAYQVGVLAAIAEMIPRGAPNPFPIICGTSAGAINATALAANAGNYRAAVRGLERVWSNITA
EQVYRTDLYACIRGVLRWFFSGVATGKTPERSSLLDNTPLQRLLSLVINFRRIQESLDQGHLRALAITASAYASGESVSF
YQGTDELAEWARARRKGKRSQIGVEHLLGSAAIPILFPATKVDKAYYGDGALRQLAPLSPALHLGATRLLVIGVSGNVSA
GHLRQLSGYPSMAQVLGHVLNSVFVDTLEGDVERLERINHTLSALGERARRKKDIKLREVDVLKIYPSRPIDEIAAEHIR
ELPRSLRFFLRSSGATRSPGASAMSYLLFEPGFTNALIEMGRKDATARKDEIMAFLNDQPLMETASEAP

Specific function: Unknown

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42226; Mature: 42226

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHKQDPVRGLILSGGGARGAYQVGVLAAIAEMIPRGAPNPFPIICGTSAGAINATALAAN
CCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCHHHEECC
AGNYRAAVRGLERVWSNITAEQVYRTDLYACIRGVLRWFFSGVATGKTPERSSLLDNTPL
CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCHH
QRLLSLVINFRRIQESLDQGHLRALAITASAYASGESVSFYQGTDELAEWARARRKGKRS
HHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHCCCCCEEEECCHHHHHHHHHHHHCCCHH
QIGVEHLLGSAAIPILFPATKVDKAYYGDGALRQLAPLSPALHLGATRLLVIGVSGNVSA
HHHHHHHHCCCCCCCEECCHHHCHHHCCCCHHHHHHCCCHHHHHCCEEEEEEEECCCCCH
GHLRQLSGYPSMAQVLGHVLNSVFVDTLEGDVERLERINHTLSALGERARRKKDIKLREV
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
DVLKIYPSRPIDEIAAEHIRELPRSLRFFLRSSGATRSPGASAMSYLLFEPGFTNALIEM
EEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCHHHHHHH
GRKDATARKDEIMAFLNDQPLMETASEAP
CCCCCCHHHHHHHHHHCCCCHHHHHCCCC
>Mature Secondary Structure
MHKQDPVRGLILSGGGARGAYQVGVLAAIAEMIPRGAPNPFPIICGTSAGAINATALAAN
CCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCHHHEECC
AGNYRAAVRGLERVWSNITAEQVYRTDLYACIRGVLRWFFSGVATGKTPERSSLLDNTPL
CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCHH
QRLLSLVINFRRIQESLDQGHLRALAITASAYASGESVSFYQGTDELAEWARARRKGKRS
HHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHCCCCCEEEECCHHHHHHHHHHHHCCCHH
QIGVEHLLGSAAIPILFPATKVDKAYYGDGALRQLAPLSPALHLGATRLLVIGVSGNVSA
HHHHHHHHCCCCCCCEECCHHHCHHHCCCCHHHHHHCCCHHHHHCCEEEEEEEECCCCCH
GHLRQLSGYPSMAQVLGHVLNSVFVDTLEGDVERLERINHTLSALGERARRKKDIKLREV
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
DVLKIYPSRPIDEIAAEHIRELPRSLRFFLRSSGATRSPGASAMSYLLFEPGFTNALIEM
EEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCHHHHHHH
GRKDATARKDEIMAFLNDQPLMETASEAP
CCCCCCHHHHHHHHHHCCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA