| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
Click here to switch to the map view.
The map label for this gene is fabG [C]
Identifier: 110833887
GI number: 110833887
Start: 1163625
End: 1164533
Strand: Direct
Name: fabG [C]
Synonym: ABO_1026
Alternate gene names: 110833887
Gene position: 1163625-1164533 (Clockwise)
Preceding gene: 110833885
Following gene: 110833890
Centisome position: 37.29
GC content: 53.03
Gene sequence:
>909_bases ATGACCCGGTCCCGCTGGCGCCCGGCGCACATTCCCGATCTGTTTGGTAAAACGATTGTTGTCACCGGGGCTAATAGCGG CATTGGCCTAGAAGCGGTGAAGCTGTTTGTTGCTAATGGCGCAGAAGTGATTATGGCATGTCGCAACACAGCGAAAGCTG AAGCGGCTGCTGAGCAGGTTAAGATATTGACGCCGCAAGCTAGCTTAACAGTGTTGCCGCTAGATTTGGCTGATCTTGAG TCGGTTAAAACGTTTGTTGCTACGCTCAAACAGCGTATTAATAAACTGGATGTGTTGCTCAATAATGCGGGAGTGATGGC GCCACCTTTGCAGCGCACCAAGGAGGGGTTCGAGATGCAATTCGGCACTAACCATCTTGGCCATTTTGCATTGACTGGGC CGTTATTGAGTCTGCTTGAAGCGGCGCCGGCTCCACGCATCGTTCAGATCTCCAGCTTGGCTCACCGCGGTGGAAAAATA TTGTGGGGAAATCTGAACGCAGAGAAGCGGTATTCACGCTGGTCTTTTTATTGTCAAAGCAAGTTGGCTAACCTGATCTT CGCTAAAGACTTGCATCGGCGTTTACAAAAATGCGGATCTTCCATTCAGGTGATGGCGGCGCACCCAGGCTACTCTGCAA CCCATCTTCAGGACACGGTGCCCGGTGGTGGCGTGTTTAACTGGTTGTTGGCTCAGCCCGCCGAGATGGGATGCTTGCCT GGGGTGATGGCAGCCACCAGTGATAATGTGACGTCTGGGGGATATTACGGCCCGGATGGAAAAGTTTTCGAGTTGCGAGG TTATCCTGCTCCGGCTTTCGCGCGTAAAATCACCGATAACGTAGGGCTGGCAGAAAAGCTATGGGATGAGTCCGAGCGCC TCACAGGGGTCCGCTACCTTAGCGCTTAG
Upstream 100 bases:
>100_bases TTTTGGATAAAGGGGGGAGTGACAATTGGCTCAACATGAGCGTGCTTTAGAGCTGCGTGGGGAAAACAATGGTAGTCACA ATTGACATTAAGGAGCGACC
Downstream 100 bases:
>100_bases GTGAGAGCAGTATTAGCTTAAACGGCGAGTGTGCCATTGGTGAGCGTTGCTGATCAGGCTTGGGTAATTCGGATCAACAT GCCGAACAAACCGTGATCGA
Product: oxidoreductase
Products: (3R)-hydroxyacyl-[acyl-carrier-protein]; NADP; NADPH; Proton; beta-ketoacyl-ACP [C]
Alternate protein names: NA
Number of amino acids: Translated: 302; Mature: 301
Protein sequence:
>302_residues MTRSRWRPAHIPDLFGKTIVVTGANSGIGLEAVKLFVANGAEVIMACRNTAKAEAAAEQVKILTPQASLTVLPLDLADLE SVKTFVATLKQRINKLDVLLNNAGVMAPPLQRTKEGFEMQFGTNHLGHFALTGPLLSLLEAAPAPRIVQISSLAHRGGKI LWGNLNAEKRYSRWSFYCQSKLANLIFAKDLHRRLQKCGSSIQVMAAHPGYSATHLQDTVPGGGVFNWLLAQPAEMGCLP GVMAATSDNVTSGGYYGPDGKVFELRGYPAPAFARKITDNVGLAEKLWDESERLTGVRYLSA
Sequences:
>Translated_302_residues MTRSRWRPAHIPDLFGKTIVVTGANSGIGLEAVKLFVANGAEVIMACRNTAKAEAAAEQVKILTPQASLTVLPLDLADLE SVKTFVATLKQRINKLDVLLNNAGVMAPPLQRTKEGFEMQFGTNHLGHFALTGPLLSLLEAAPAPRIVQISSLAHRGGKI LWGNLNAEKRYSRWSFYCQSKLANLIFAKDLHRRLQKCGSSIQVMAAHPGYSATHLQDTVPGGGVFNWLLAQPAEMGCLP GVMAATSDNVTSGGYYGPDGKVFELRGYPAPAFARKITDNVGLAEKLWDESERLTGVRYLSA >Mature_301_residues TRSRWRPAHIPDLFGKTIVVTGANSGIGLEAVKLFVANGAEVIMACRNTAKAEAAAEQVKILTPQASLTVLPLDLADLES VKTFVATLKQRINKLDVLLNNAGVMAPPLQRTKEGFEMQFGTNHLGHFALTGPLLSLLEAAPAPRIVQISSLAHRGGKIL WGNLNAEKRYSRWSFYCQSKLANLIFAKDLHRRLQKCGSSIQVMAAHPGYSATHLQDTVPGGGVFNWLLAQPAEMGCLPG VMAATSDNVTSGGYYGPDGKVFELRGYPAPAFARKITDNVGLAEKLWDESERLTGVRYLSA
Specific function: Fatty acid biosynthesis pathway; first reduction step. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI225579078, Length=294, Percent_Identity=40.8163265306122, Blast_Score=186, Evalue=2e-47, Organism=Homo sapiens, GI186928839, Length=289, Percent_Identity=37.7162629757785, Blast_Score=176, Evalue=3e-44, Organism=Homo sapiens, GI10190746, Length=316, Percent_Identity=38.2911392405063, Blast_Score=171, Evalue=7e-43, Organism=Homo sapiens, GI166795268, Length=290, Percent_Identity=36.8965517241379, Blast_Score=166, Evalue=4e-41, Organism=Homo sapiens, GI19923931, Length=258, Percent_Identity=40.3100775193798, Blast_Score=152, Evalue=4e-37, Organism=Homo sapiens, GI7706523, Length=215, Percent_Identity=40.4651162790698, Blast_Score=138, Evalue=7e-33, Organism=Homo sapiens, GI193804850, Length=296, Percent_Identity=32.4324324324324, Blast_Score=128, Evalue=8e-30, Organism=Homo sapiens, GI146231950, Length=295, Percent_Identity=32.8813559322034, Blast_Score=115, Evalue=4e-26, Organism=Homo sapiens, GI7705421, Length=252, Percent_Identity=29.3650793650794, Blast_Score=79, Evalue=5e-15, Organism=Homo sapiens, GI13375997, Length=161, Percent_Identity=30.4347826086957, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI72534732, Length=161, Percent_Identity=29.8136645962733, Blast_Score=73, Evalue=3e-13, Organism=Caenorhabditis elegans, GI17532805, Length=303, Percent_Identity=31.3531353135314, Blast_Score=127, Evalue=5e-30, Organism=Caenorhabditis elegans, GI193207620, Length=299, Percent_Identity=32.1070234113712, Blast_Score=125, Evalue=2e-29, Organism=Caenorhabditis elegans, GI17558006, Length=257, Percent_Identity=33.0739299610895, Blast_Score=119, Evalue=1e-27, Organism=Caenorhabditis elegans, GI72001364, Length=229, Percent_Identity=36.2445414847162, Blast_Score=117, Evalue=7e-27, Organism=Caenorhabditis elegans, GI17532791, Length=210, Percent_Identity=32.3809523809524, Blast_Score=101, Evalue=5e-22, Organism=Caenorhabditis elegans, GI17505416, Length=266, Percent_Identity=28.5714285714286, Blast_Score=97, Evalue=8e-21, Organism=Caenorhabditis elegans, GI71992402, Length=210, Percent_Identity=30.952380952381, Blast_Score=94, Evalue=6e-20, Organism=Caenorhabditis elegans, GI32565532, Length=209, Percent_Identity=32.0574162679426, Blast_Score=92, Evalue=3e-19, Organism=Caenorhabditis elegans, GI17535059, Length=294, Percent_Identity=27.891156462585, Blast_Score=90, Evalue=2e-18, Organism=Caenorhabditis elegans, GI115533174, Length=295, Percent_Identity=28.4745762711864, Blast_Score=76, Evalue=3e-14, Organism=Caenorhabditis elegans, GI115533172, Length=295, Percent_Identity=28.4745762711864, Blast_Score=75, Evalue=3e-14, Organism=Saccharomyces cerevisiae, GI6324820, Length=304, Percent_Identity=29.6052631578947, Blast_Score=100, Evalue=4e-22, Organism=Saccharomyces cerevisiae, GI6323882, Length=211, Percent_Identity=29.3838862559242, Blast_Score=74, Evalue=4e-14, Organism=Saccharomyces cerevisiae, GI6322227, Length=214, Percent_Identity=26.6355140186916, Blast_Score=64, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6322067, Length=218, Percent_Identity=28.8990825688073, Blast_Score=63, Evalue=6e-11, Organism=Drosophila melanogaster, GI28573296, Length=292, Percent_Identity=38.013698630137, Blast_Score=174, Evalue=4e-44, Organism=Drosophila melanogaster, GI19921754, Length=204, Percent_Identity=45.5882352941176, Blast_Score=165, Evalue=4e-41, Organism=Drosophila melanogaster, GI24586328, Length=216, Percent_Identity=43.9814814814815, Blast_Score=164, Evalue=6e-41, Organism=Drosophila melanogaster, GI22024069, Length=303, Percent_Identity=37.6237623762376, Blast_Score=161, Evalue=5e-40, Organism=Drosophila melanogaster, GI45554248, Length=292, Percent_Identity=38.013698630137, Blast_Score=151, Evalue=5e-37, Organism=Drosophila melanogaster, GI24640117, Length=292, Percent_Identity=38.013698630137, Blast_Score=151, Evalue=5e-37, Organism=Drosophila melanogaster, GI161076371, Length=204, Percent_Identity=40.6862745098039, Blast_Score=149, Evalue=2e-36, Organism=Drosophila melanogaster, GI20129347, Length=299, Percent_Identity=32.7759197324415, Blast_Score=138, Evalue=4e-33, Organism=Drosophila melanogaster, GI24656154, Length=252, Percent_Identity=37.6984126984127, Blast_Score=135, Evalue=5e-32, Organism=Drosophila melanogaster, GI19922628, Length=252, Percent_Identity=37.6984126984127, Blast_Score=135, Evalue=5e-32, Organism=Drosophila melanogaster, GI24647946, Length=291, Percent_Identity=32.6460481099656, Blast_Score=129, Evalue=2e-30, Organism=Drosophila melanogaster, GI45553409, Length=291, Percent_Identity=32.6460481099656, Blast_Score=129, Evalue=3e-30, Organism=Drosophila melanogaster, GI24647948, Length=291, Percent_Identity=32.6460481099656, Blast_Score=129, Evalue=3e-30, Organism=Drosophila melanogaster, GI24647931, Length=216, Percent_Identity=35.1851851851852, Blast_Score=88, Evalue=6e-18, Organism=Drosophila melanogaster, GI21358495, Length=214, Percent_Identity=31.3084112149533, Blast_Score=77, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: 1.1.1.100 [C]
Molecular weight: Translated: 32669; Mature: 32538
Theoretical pI: Translated: 9.72; Mature: 9.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRSRWRPAHIPDLFGKTIVVTGANSGIGLEAVKLFVANGAEVIMACRNTAKAEAAAEQV CCCCCCCCCCCHHHCCCEEEEECCCCCCCHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHE KILTPQASLTVLPLDLADLESVKTFVATLKQRINKLDVLLNNAGVMAPPLQRTKEGFEMQ EEECCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCEEE FGTNHLGHFALTGPLLSLLEAAPAPRIVQISSLAHRGGKILWGNLNAEKRYSRWSFYCQS CCCCCCCHHHHHHHHHHHHHHCCCCCEEEEHHHHHCCCEEEEECCCCHHHHHHHHHHHHH KLANLIFAKDLHRRLQKCGSSIQVMAAHPGYSATHLQDTVPGGGVFNWLLAQPAEMGCLP HHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHCCCCCCCHHHHHHHCCCHHHCCCC GVMAATSDNVTSGGYYGPDGKVFELRGYPAPAFARKITDNVGLAEKLWDESERLTGVRYL CHHHCCCCCCCCCCEECCCCCEEEEECCCCHHHHHHHHCCCCHHHHHHCCHHHHCCEEEE SA CC >Mature Secondary Structure TRSRWRPAHIPDLFGKTIVVTGANSGIGLEAVKLFVANGAEVIMACRNTAKAEAAAEQV CCCCCCCCCCHHHCCCEEEEECCCCCCCHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHE KILTPQASLTVLPLDLADLESVKTFVATLKQRINKLDVLLNNAGVMAPPLQRTKEGFEMQ EEECCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCEEE FGTNHLGHFALTGPLLSLLEAAPAPRIVQISSLAHRGGKILWGNLNAEKRYSRWSFYCQS CCCCCCCHHHHHHHHHHHHHHCCCCCEEEEHHHHHCCCEEEEECCCCHHHHHHHHHHHHH KLANLIFAKDLHRRLQKCGSSIQVMAAHPGYSATHLQDTVPGGGVFNWLLAQPAEMGCLP HHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHCCCCCCCHHHHHHHCCCHHHCCCC GVMAATSDNVTSGGYYGPDGKVFELRGYPAPAFARKITDNVGLAEKLWDESERLTGVRYL CHHHCCCCCCCCCCEECCCCCEEEEECCCCHHHHHHHHCCCCHHHHHHCCHHHHCCEEEE SA CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NADPH [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Oxoacyl-[acyl-carrier-protein]; NADPH; D-3-hydroxy-acyl-ACP; NADP [C]
Specific reaction: Oxoacyl-[acyl-carrier-protein] + NADPH = (3R)-hydroxyacyl-[acyl-carrier-protein] + NADP+ D-3-hydroxy-acyl-ACP + NADP = NADPH + Proton + beta-ketoacyl-ACP [C]
General reaction: Redox reaction [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8383668 [H]