| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is tesB [H]
Identifier: 110833890
GI number: 110833890
Start: 1169510
End: 1170388
Strand: Direct
Name: tesB [H]
Synonym: ABO_1029
Alternate gene names: 110833890
Gene position: 1169510-1170388 (Clockwise)
Preceding gene: 110833887
Following gene: 110833891
Centisome position: 37.48
GC content: 55.29
Gene sequence:
>879_bases ATGAAGGCATCGGTTCAGGAACTGATGAATCTGTTCGATTTGGAGCAGCTGGAGAATAATTTGTTTCGGGGACAAAGCGA GGCCAATGGGCAGCGCAGTGTGTTTGGTGGCTTGGTGGCTGGGCAGGCGTTGTTGGCCGCCTCGCGGACGGTGGATGATG CACGTCCTGTGCACTCCTTGCATGCGTATTTTTTGCGCCCCGGCGATTTTAACGTGCCGATTGTCTATTACGTTGACCGG ATACGTGATGGCAAGAGTTTCACCACGCGCCGAGTGGACGCGATCCAGCATGGTCGGCCGATCTTCTCTCTGGCGGCGTC TTACCAAGTGGCGGAGGAGGGGGTTTCCCATCAGTCAGTTATGCCCGACGTGCCGGGGCCTGAGGGCCTAGAGAATGATG AGGGCATTCGTATGAAGCTGGTGGATCGCTTGCCTGAACAGTTTCGAAAGGATTTTCTGACTGACCGGCCGGTAGAGTTT CGGCCGGTGACGCCGAAAGATTCCATCTCCTCTGAACCCCAGGACCCTGTCCGCGAGGTTTGGTTCAGGGTGGTAGATCG GGTGGATGCTAACCCGATGACCCAGCGAGCGTTATTAGCCTATTGTTCCGACTTTGGCCTAATGGGCACCGCCATGCTGC CTCACGGAATGAATTTCTGGCAGCCTAATGTGCAGTGCGCGAGCATTGATCATGCCATGTGGTTCCATAATGATTTTCGC ATTGATGAGTGGCTGCTGTATCGAAGTGATAGCCCCTTCTCGGGTGGTTCTCGCGGCCTGAATTTTGGTTCTATTTATCG CCAAGATGGCACCTTGGTGGCGTCGGTGGCTCAAGAAGGATTGATGCGCCTGCATCCCTCAGACAGCCCGACGGAATGA
Upstream 100 bases:
>100_bases GTTATTGCCTGCCCACTTTTCTGGATGTCGTCAATCTCAACATTCTTTCGAGTTGCAGGTAGGATGGCGACCATTGGTTT TATTGCGCAGAGGGTTGAGT
Downstream 100 bases:
>100_bases CACAACTGATTGACCTGTTGGAAGACGTTCGTGCCTGCCGGCTGTGTGAGTCGCATCTGCCGCTGGGGCCGCGGCCGGTG GTGCAGGCTGGGCAGGGCGC
Product: acyl-CoA thioesterase II
Products: Hydrolyzed acyl-CoA thioesters [C]
Alternate protein names: Acyl-CoA thioesterase II; TEII [H]
Number of amino acids: Translated: 292; Mature: 292
Protein sequence:
>292_residues MKASVQELMNLFDLEQLENNLFRGQSEANGQRSVFGGLVAGQALLAASRTVDDARPVHSLHAYFLRPGDFNVPIVYYVDR IRDGKSFTTRRVDAIQHGRPIFSLAASYQVAEEGVSHQSVMPDVPGPEGLENDEGIRMKLVDRLPEQFRKDFLTDRPVEF RPVTPKDSISSEPQDPVREVWFRVVDRVDANPMTQRALLAYCSDFGLMGTAMLPHGMNFWQPNVQCASIDHAMWFHNDFR IDEWLLYRSDSPFSGGSRGLNFGSIYRQDGTLVASVAQEGLMRLHPSDSPTE
Sequences:
>Translated_292_residues MKASVQELMNLFDLEQLENNLFRGQSEANGQRSVFGGLVAGQALLAASRTVDDARPVHSLHAYFLRPGDFNVPIVYYVDR IRDGKSFTTRRVDAIQHGRPIFSLAASYQVAEEGVSHQSVMPDVPGPEGLENDEGIRMKLVDRLPEQFRKDFLTDRPVEF RPVTPKDSISSEPQDPVREVWFRVVDRVDANPMTQRALLAYCSDFGLMGTAMLPHGMNFWQPNVQCASIDHAMWFHNDFR IDEWLLYRSDSPFSGGSRGLNFGSIYRQDGTLVASVAQEGLMRLHPSDSPTE >Mature_292_residues MKASVQELMNLFDLEQLENNLFRGQSEANGQRSVFGGLVAGQALLAASRTVDDARPVHSLHAYFLRPGDFNVPIVYYVDR IRDGKSFTTRRVDAIQHGRPIFSLAASYQVAEEGVSHQSVMPDVPGPEGLENDEGIRMKLVDRLPEQFRKDFLTDRPVEF RPVTPKDSISSEPQDPVREVWFRVVDRVDANPMTQRALLAYCSDFGLMGTAMLPHGMNFWQPNVQCASIDHAMWFHNDFR IDEWLLYRSDSPFSGGSRGLNFGSIYRQDGTLVASVAQEGLMRLHPSDSPTE
Specific function: Can hydrolyze a broad range of acyl-CoA thioesters. Its physiological function is not known [H]
COG id: COG1946
COG function: function code I; Acyl-CoA thioesterase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the C/M/P thioester hydrolase family [H]
Homologues:
Organism=Homo sapiens, GI34577075, Length=294, Percent_Identity=39.7959183673469, Blast_Score=221, Evalue=6e-58, Organism=Escherichia coli, GI1786657, Length=271, Percent_Identity=47.9704797047971, Blast_Score=270, Evalue=1e-73, Organism=Caenorhabditis elegans, GI71988741, Length=290, Percent_Identity=37.2413793103448, Blast_Score=193, Evalue=7e-50, Organism=Caenorhabditis elegans, GI17558508, Length=313, Percent_Identity=36.1022364217252, Blast_Score=172, Evalue=2e-43, Organism=Caenorhabditis elegans, GI115532456, Length=313, Percent_Identity=35.1437699680511, Blast_Score=161, Evalue=4e-40, Organism=Caenorhabditis elegans, GI17531889, Length=313, Percent_Identity=35.1437699680511, Blast_Score=160, Evalue=5e-40, Organism=Caenorhabditis elegans, GI17531885, Length=313, Percent_Identity=35.1437699680511, Blast_Score=160, Evalue=7e-40, Organism=Caenorhabditis elegans, GI71982224, Length=309, Percent_Identity=34.3042071197411, Blast_Score=153, Evalue=9e-38, Organism=Caenorhabditis elegans, GI212645202, Length=287, Percent_Identity=30.3135888501742, Blast_Score=123, Evalue=1e-28, Organism=Saccharomyces cerevisiae, GI6322480, Length=303, Percent_Identity=24.0924092409241, Blast_Score=77, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003703 [H]
Pfam domain/function: PF02551 Acyl_CoA_thio [H]
EC number: 3.1.2.- [C]
Molecular weight: Translated: 32906; Mature: 32906
Theoretical pI: Translated: 5.19; Mature: 5.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKASVQELMNLFDLEQLENNLFRGQSEANGQRSVFGGLVAGQALLAASRTVDDARPVHSL CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHH HAYFLRPGDFNVPIVYYVDRIRDGKSFTTRRVDAIQHGRPIFSLAASYQVAEEGVSHQSV HHHEECCCCCCCCCEEEEEHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCC MPDVPGPEGLENDEGIRMKLVDRLPEQFRKDFLTDRPVEFRPVTPKDSISSEPQDPVREV CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCHHHHHH WFRVVDRVDANPMTQRALLAYCSDFGLMGTAMLPHGMNFWQPNVQCASIDHAMWFHNDFR HHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCEEEECCHHHHHCCCCC IDEWLLYRSDSPFSGGSRGLNFGSIYRQDGTLVASVAQEGLMRLHPSDSPTE CCEEEEEECCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHEEECCCCCCCC >Mature Secondary Structure MKASVQELMNLFDLEQLENNLFRGQSEANGQRSVFGGLVAGQALLAASRTVDDARPVHSL CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHH HAYFLRPGDFNVPIVYYVDRIRDGKSFTTRRVDAIQHGRPIFSLAASYQVAEEGVSHQSV HHHEECCCCCCCCCEEEEEHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCC MPDVPGPEGLENDEGIRMKLVDRLPEQFRKDFLTDRPVEFRPVTPKDSISSEPQDPVREV CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCHHHHHH WFRVVDRVDANPMTQRALLAYCSDFGLMGTAMLPHGMNFWQPNVQCASIDHAMWFHNDFR HHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCEEEECCHHHHHCCCCC IDEWLLYRSDSPFSGGSRGLNFGSIYRQDGTLVASVAQEGLMRLHPSDSPTE CCEEEEEECCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: acyl-CoA thioesters [C]
Specific reaction: Hydrolyzes a broad range of acyl-CoA thioesters [C]
General reaction: Hydrolase; Acting on ester bonds; Thiolester hydrolases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]