Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

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The map label for this gene is 110833871

Identifier: 110833871

GI number: 110833871

Start: 1147330

End: 1147980

Strand: Direct

Name: 110833871

Synonym: ABO_1010

Alternate gene names: NA

Gene position: 1147330-1147980 (Clockwise)

Preceding gene: 110833867

Following gene: 110833873

Centisome position: 36.77

GC content: 52.53

Gene sequence:

>651_bases
ATGGAGCAGGCCAATAATAATGATTTCGGCCAGCAACGGCGTCGCCAGCTGTTAGCGGGCGTGCCGTTTTTTAATGAAAT
TAATCGTGATGATCAGAACGAATTTTCCCGGCTTGAACAGACCACCCGTCTTTGGGTTGCCGCTTCGGGAGAAAGCGTAA
TTCGAGCCGGTGAGGTGGATTCCACTCTGTACTTTTTGTTGAGGGGGCAGCTGGAAGTGTTATCGGAGAATCCCCAGGGT
GCGCCGTTGTATTATGTATCACCGGGTGAGGTGTTTGGCTCCTTGTCTATGCTGCTGGGGACTCCGCGTAGTGCGACTAT
TAAGGTGACAGATAATGCCCGCGAAGCGGTATTGGCAAGCTTGGATTTCAATGATTTTAATGATGATGGCAGTGCCTATT
CGCTGGCAACCCGGCTGGCTTTTTTCCATATGATTGTGCATCACATTCGCTGGACTTTGGAGGTGAAGCGAATGCAGGCA
CCGACCCATGAACTGGTTCAGTCTATGCGCAAGTTGCCAGTGTTTTATGGCGAGAAAAACAGTCCGCAAGAGCTGGCTGC
ATTGAAAGCGCAGGCGCAAGGGCTGGCAGAATTGCTGTGTCGCTGGAACGAGGAAGGCCAGGCCAGCACCGGGGCTCTGC
AGCTGACCTGA

Upstream 100 bases:

>100_bases
AGTTCACCCCTCTTTTTTTCCTTGCCGTTGCTCTGTTGTGGAGGTCGCTCTAGCATGTGTGTAGTTGATTACAATGCCAT
CAGACCAGTGGGGGTAGTGG

Downstream 100 bases:

>100_bases
GGGGCTCTGCTTCGGGGAATACGCGCTGCGCTATTTCCCCGTTGCTAGTGCTGGTCTACCTTAACGGCCAGCACGTCGCA
GTGCGCACCGGGGACCAGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 216; Mature: 216

Protein sequence:

>216_residues
MEQANNNDFGQQRRRQLLAGVPFFNEINRDDQNEFSRLEQTTRLWVAASGESVIRAGEVDSTLYFLLRGQLEVLSENPQG
APLYYVSPGEVFGSLSMLLGTPRSATIKVTDNAREAVLASLDFNDFNDDGSAYSLATRLAFFHMIVHHIRWTLEVKRMQA
PTHELVQSMRKLPVFYGEKNSPQELAALKAQAQGLAELLCRWNEEGQASTGALQLT

Sequences:

>Translated_216_residues
MEQANNNDFGQQRRRQLLAGVPFFNEINRDDQNEFSRLEQTTRLWVAASGESVIRAGEVDSTLYFLLRGQLEVLSENPQG
APLYYVSPGEVFGSLSMLLGTPRSATIKVTDNAREAVLASLDFNDFNDDGSAYSLATRLAFFHMIVHHIRWTLEVKRMQA
PTHELVQSMRKLPVFYGEKNSPQELAALKAQAQGLAELLCRWNEEGQASTGALQLT
>Mature_216_residues
MEQANNNDFGQQRRRQLLAGVPFFNEINRDDQNEFSRLEQTTRLWVAASGESVIRAGEVDSTLYFLLRGQLEVLSENPQG
APLYYVSPGEVFGSLSMLLGTPRSATIKVTDNAREAVLASLDFNDFNDDGSAYSLATRLAFFHMIVHHIRWTLEVKRMQA
PTHELVQSMRKLPVFYGEKNSPQELAALKAQAQGLAELLCRWNEEGQASTGALQLT

Specific function: Unknown

COG id: COG0664

COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24222; Mature: 24222

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: PS50042 CNMP_BINDING_3 ; PS00300 SRP54

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQANNNDFGQQRRRQLLAGVPFFNEINRDDQNEFSRLEQTTRLWVAASGESVIRAGEVD
CCCCCCCCHHHHHHHHHHHCCCCHHHCCCCCHHHHHHHHHHHEEEEEECCCCEEECCCCC
STLYFLLRGQLEVLSENPQGAPLYYVSPGEVFGSLSMLLGTPRSATIKVTDNAREAVLAS
HHHHHHHHHHHHEECCCCCCCEEEEECHHHHHHHHHHHHCCCCCCEEEEECCCHHHEEEE
LDFNDFNDDGSAYSLATRLAFFHMIVHHIRWTLEVKRMQAPTHELVQSMRKLPVFYGEKN
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCEEECCCC
SPQELAALKAQAQGLAELLCRWNEEGQASTGALQLT
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEC
>Mature Secondary Structure
MEQANNNDFGQQRRRQLLAGVPFFNEINRDDQNEFSRLEQTTRLWVAASGESVIRAGEVD
CCCCCCCCHHHHHHHHHHHCCCCHHHCCCCCHHHHHHHHHHHEEEEEECCCCEEECCCCC
STLYFLLRGQLEVLSENPQGAPLYYVSPGEVFGSLSMLLGTPRSATIKVTDNAREAVLAS
HHHHHHHHHHHHEECCCCCCCEEEEECHHHHHHHHHHHHCCCCCCEEEEECCCHHHEEEE
LDFNDFNDDGSAYSLATRLAFFHMIVHHIRWTLEVKRMQAPTHELVQSMRKLPVFYGEKN
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCEEECCCC
SPQELAALKAQAQGLAELLCRWNEEGQASTGALQLT
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA