| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is 110833867
Identifier: 110833867
GI number: 110833867
Start: 1144859
End: 1145080
Strand: Direct
Name: 110833867
Synonym: ABO_1006
Alternate gene names: NA
Gene position: 1144859-1145080 (Clockwise)
Preceding gene: 110833866
Following gene: 110833871
Centisome position: 36.69
GC content: 53.6
Gene sequence:
>222_bases ATGACGGTGCTGTTGTATACCACCTTGGGGTGCCACCTTTGTGATCAGGCCAGGGAGCTGGTAGCCATGGTCAGGCCGGA TCTTGAAATTACGCTGGTAGATATCGCTGAAGATGACACCTTGATCGAACAGTATGGTGAGCGAATCCCGGTATTCATGC GCGAAGGGCAGGAGCTGGCTTGGCCGTTTGGCTTGCTCGACGTACAGCAGTTTCTTTGCTGA
Upstream 100 bases:
>100_bases GGTACGCGGTAGAGGATATCTCACGTTGGAGTATCCCGGAGGATTTCCGCCGCAATGAAAAAATCCATTATTGCTATGCC ATTCGTCATGTGGAGGATGC
Downstream 100 bases:
>100_bases TGTTTTGATGTCGGGTTACGCCTTTCTGGCTAGCCCGACAAACATCCTGCGCATTGTCCTGATGCGTTTTTTCCGGTCAG CGAAACAGCGTTAACGCATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 73; Mature: 72
Protein sequence:
>73_residues MTVLLYTTLGCHLCDQARELVAMVRPDLEITLVDIAEDDTLIEQYGERIPVFMREGQELAWPFGLLDVQQFLC
Sequences:
>Translated_73_residues MTVLLYTTLGCHLCDQARELVAMVRPDLEITLVDIAEDDTLIEQYGERIPVFMREGQELAWPFGLLDVQQFLC >Mature_72_residues TVLLYTTLGCHLCDQARELVAMVRPDLEITLVDIAEDDTLIEQYGERIPVFMREGQELAWPFGLLDVQQFLC
Specific function: Unknown
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8387; Mature: 8256
Theoretical pI: Translated: 3.85; Mature: 3.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.1 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 8.2 %Cys+Met (Translated Protein) 4.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVLLYTTLGCHLCDQARELVAMVRPDLEITLVDIAEDDTLIEQYGERIPVFMREGQELA CEEEEEECHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHCCCCCHHCCCCCCCC WPFGLLDVQQFLC CCCCHHHHHHHCC >Mature Secondary Structure TVLLYTTLGCHLCDQARELVAMVRPDLEITLVDIAEDDTLIEQYGERIPVFMREGQELA EEEEEECHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHCCCCCHHCCCCCCCC WPFGLLDVQQFLC CCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA