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The map label for this gene is 110833862

Identifier: 110833862

GI number: 110833862

Start: 1137422

End: 1138573

Strand: Direct

Name: 110833862

Synonym: ABO_1001

Alternate gene names: NA

Gene position: 1137422-1138573 (Clockwise)

Preceding gene: 110833861

Following gene: 110833863

Centisome position: 36.45

GC content: 53.99

Gene sequence:

>1152_bases
ATGGCACCCGGTTGGTTTTGCTTGGCCGTGAAGCAGGGCCTTTGGGAAGAGCAAAAAAGAATGAAAAAAACAGTGTTAAT
GGCCTTGTCAGCCGTGCTGTCTGCACCTTCGCAGGCAGATTTCGTTTCCAATAATGGGCCTCTGGTTACGGCAAACAGCT
ATTTGGATATCGCCTATGCGGATAACCGGATCGTTGCTGTGGGTGACCGAGGCAAAATTCTGTATTCCGATGATCAAGGT
GATCATTGGACGCAGGCGATCACACCGTCTGAAGTGCTGCTCACCTCCGTTTGTTTTGCCGATGCTCGCCACGGTTGGGC
TGTTGGCCATGATGCGTTGGTATTAGCCAGCAGTGATGGCGGAGAATCCTGGACCGTTCAGTACAGTGATCCTTTGGGGG
GCGACGGCGATGTAGGGCTCGCGGAAGAAAAACGGGACGATTACTCCATGGATGATCTCTATGGTGATCCCTACAGCGAT
AATGCTTACGGGGATGACGGTGGTGATCTTTATGATGGTAGCGATAGAGTCATGGCACCAGTGGATACATCTGGTGCGCC
GTTGCTGGATGTGTTTTGCGACAGCCGTGAGAGTGCAGTCGCCGTAGGGGGCTATGGTTATTTCCTGAAAACCAGCGATG
GCGGAGCAACCTGGGATAAAGCCCTGGACAGCTTGGATAATCGTGAGGGTTGGCACCTGTACGATTATACCGCCGTGAAA
GGGGGCAATGACCGTTACGTTGTAGGCGAAAAAGGTCTCATGTTCCATTCCGCCGACAAAGGCATCCGTTGGAAAAAGCT
AGATAGCCCCTATGGCGGCACCCTGTTCGGTGTAACCCCGATTTCTGATAACAACGTCCTGACATATGGCTTGCAGGGCA
ATGTGTGGTTGACGGCTAATCGGGGGCGCAGCTGGGTGAAAATTCCCTCAAAGCTGACCCGTGGTATCAACGATGGCACC
GTACTGGCGGATGGCACGGTGGTGCTGGTCACAAATGCTGGCGGCATCCTTACCAGTCGCGATGGTGGTCAATCCTTTTC
CCTACGGTACCTGCCGGGCCGCCGTTCAATCTCCGCTGTTCTTCCCCGTGATGCGGGCGGCATTCTTGTCGCCGGGCAGG
GTGGGCTGCGTGTGATCGAAGACGTTAAATAA

Upstream 100 bases:

>100_bases
GACCGTTATTTCCACCCAGCAGCGCTACGCCGACGCGGCCGTTAATTATAAAAAAATGCCGGTTTAATGAAGCCGGAAAG
CCAAGGCGACCGGAGTGCTT

Downstream 100 bases:

>100_bases
GGGGCACAGCATGTCTGGTCGCATTTCAAGAAGTATTGCCAGTGGGCTGTTTGCTTTTCGGCCCCTAATTCTCCTGGCTT
TTATTGCAGCCACAGTGCTG

Product: BNR domain-containing protein

Products: NA

Alternate protein names: BNR Repeat-Containing Glycosyl Hydrolase; Glycosyl Hydrolase; BNR/Asp-Box Repeat-Containing Protein; BNR Domain-Containing Protein; Glycosyl Hydrolase BNR Repeat Protein; Glycosyl Hydrolase BNR Repeat; BNR/Asp-Box Repeat Protein; BNR/Asp-Box Repeat Domain Protein; Plant Photosystem II Stability/Assembly Factor Protein; Glycosyl Hydrolase BNR Repeat-Containing Glycosyl Hydrolase; Protein Related Photosystem II Stability/Assembly Factor; Oxidoreductase

Number of amino acids: Translated: 383; Mature: 382

Protein sequence:

>383_residues
MAPGWFCLAVKQGLWEEQKRMKKTVLMALSAVLSAPSQADFVSNNGPLVTANSYLDIAYADNRIVAVGDRGKILYSDDQG
DHWTQAITPSEVLLTSVCFADARHGWAVGHDALVLASSDGGESWTVQYSDPLGGDGDVGLAEEKRDDYSMDDLYGDPYSD
NAYGDDGGDLYDGSDRVMAPVDTSGAPLLDVFCDSRESAVAVGGYGYFLKTSDGGATWDKALDSLDNREGWHLYDYTAVK
GGNDRYVVGEKGLMFHSADKGIRWKKLDSPYGGTLFGVTPISDNNVLTYGLQGNVWLTANRGRSWVKIPSKLTRGINDGT
VLADGTVVLVTNAGGILTSRDGGQSFSLRYLPGRRSISAVLPRDAGGILVAGQGGLRVIEDVK

Sequences:

>Translated_383_residues
MAPGWFCLAVKQGLWEEQKRMKKTVLMALSAVLSAPSQADFVSNNGPLVTANSYLDIAYADNRIVAVGDRGKILYSDDQG
DHWTQAITPSEVLLTSVCFADARHGWAVGHDALVLASSDGGESWTVQYSDPLGGDGDVGLAEEKRDDYSMDDLYGDPYSD
NAYGDDGGDLYDGSDRVMAPVDTSGAPLLDVFCDSRESAVAVGGYGYFLKTSDGGATWDKALDSLDNREGWHLYDYTAVK
GGNDRYVVGEKGLMFHSADKGIRWKKLDSPYGGTLFGVTPISDNNVLTYGLQGNVWLTANRGRSWVKIPSKLTRGINDGT
VLADGTVVLVTNAGGILTSRDGGQSFSLRYLPGRRSISAVLPRDAGGILVAGQGGLRVIEDVK
>Mature_382_residues
APGWFCLAVKQGLWEEQKRMKKTVLMALSAVLSAPSQADFVSNNGPLVTANSYLDIAYADNRIVAVGDRGKILYSDDQGD
HWTQAITPSEVLLTSVCFADARHGWAVGHDALVLASSDGGESWTVQYSDPLGGDGDVGLAEEKRDDYSMDDLYGDPYSDN
AYGDDGGDLYDGSDRVMAPVDTSGAPLLDVFCDSRESAVAVGGYGYFLKTSDGGATWDKALDSLDNREGWHLYDYTAVKG
GNDRYVVGEKGLMFHSADKGIRWKKLDSPYGGTLFGVTPISDNNVLTYGLQGNVWLTANRGRSWVKIPSKLTRGINDGTV
LADGTVVLVTNAGGILTSRDGGQSFSLRYLPGRRSISAVLPRDAGGILVAGQGGLRVIEDVK

Specific function: Unknown

COG id: COG4447

COG function: function code R; Uncharacterized protein related to plant photosystem II stability/assembly factor

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41018; Mature: 40887

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPGWFCLAVKQGLWEEQKRMKKTVLMALSAVLSAPSQADFVSNNGPLVTANSYLDIAYA
CCCCEEEEEEHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCEEEECCEEEEEEE
DNRIVAVGDRGKILYSDDQGDHWTQAITPSEVLLTSVCFADARHGWAVGHDALVLASSDG
CCEEEEECCCCCEEEECCCCCCEEECCCHHHHHHHHHHHHHCCCCEEECCCEEEEEECCC
GESWTVQYSDPLGGDGDVGLAEEKRDDYSMDDLYGDPYSDNAYGDDGGDLYDGSDRVMAP
CCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCEECCCCCEEEE
VDTSGAPLLDVFCDSRESAVAVGGYGYFLKTSDGGATWDKALDSLDNREGWHLYDYTAVK
CCCCCCCEEEEEECCCCCEEEECCEEEEEEECCCCCHHHHHHHHHCCCCCCEEEEEEEEE
GGNDRYVVGEKGLMFHSADKGIRWKKLDSPYGGTLFGVTPISDNNVLTYGLQGNVWLTAN
CCCCEEEECCCCEEEECCCCCCEEEECCCCCCCEEEEEEECCCCCEEEEECCCCEEEEEC
RGRSWVKIPSKLTRGINDGTVLADGTVVLVTNAGGILTSRDGGQSFSLRYLPGRRSISAV
CCCCEEECCHHHHCCCCCCEEEECCEEEEEECCCCEEEECCCCCEEEEEECCCCCCEEEE
LPRDAGGILVAGQGGLRVIEDVK
CCCCCCCEEEECCCCCEEHCCCC
>Mature Secondary Structure 
APGWFCLAVKQGLWEEQKRMKKTVLMALSAVLSAPSQADFVSNNGPLVTANSYLDIAYA
CCCEEEEEEHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCEEEECCEEEEEEE
DNRIVAVGDRGKILYSDDQGDHWTQAITPSEVLLTSVCFADARHGWAVGHDALVLASSDG
CCEEEEECCCCCEEEECCCCCCEEECCCHHHHHHHHHHHHHCCCCEEECCCEEEEEECCC
GESWTVQYSDPLGGDGDVGLAEEKRDDYSMDDLYGDPYSDNAYGDDGGDLYDGSDRVMAP
CCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCEECCCCCEEEE
VDTSGAPLLDVFCDSRESAVAVGGYGYFLKTSDGGATWDKALDSLDNREGWHLYDYTAVK
CCCCCCCEEEEEECCCCCEEEECCEEEEEEECCCCCHHHHHHHHHCCCCCCEEEEEEEEE
GGNDRYVVGEKGLMFHSADKGIRWKKLDSPYGGTLFGVTPISDNNVLTYGLQGNVWLTAN
CCCCEEEECCCCEEEECCCCCCEEEECCCCCCCEEEEEEECCCCCEEEEECCCCEEEEEC
RGRSWVKIPSKLTRGINDGTVLADGTVVLVTNAGGILTSRDGGQSFSLRYLPGRRSISAV
CCCCEEECCHHHHCCCCCCEEEECCEEEEEECCCCEEEECCCCCEEEEEECCCCCCEEEE
LPRDAGGILVAGQGGLRVIEDVK
CCCCCCCEEEECCCCCEEHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA