Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

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The map label for this gene is 110833861

Identifier: 110833861

GI number: 110833861

Start: 1135960

End: 1137366

Strand: Direct

Name: 110833861

Synonym: ABO_1000

Alternate gene names: NA

Gene position: 1135960-1137366 (Clockwise)

Preceding gene: 110833860

Following gene: 110833862

Centisome position: 36.41

GC content: 53.3

Gene sequence:

>1407_bases
ATGTTGAAGAAACTGACCGCAATGGGCGGTGCTTTGGCTCTGTCCTTGAGTGTGACGGCCAATGTGCACGCTGGCGTATC
TAGCCAAGAGGCGGCGAAATTGGGTAAATCGCTGACGCCTTTCGGTGCACAGGTCAAAGGTAACGGCAAAACCATTTCAA
CCGGGCTGGGCATTCCGGATTACACCGGCGGCATCCAGCGCAAAGATATTCCCAAGACCTATACCCGTCCGGGCCAACAT
CACCCAGATCCGTACACCGCTGACAAAATTGCTTTCACGATCACCGCTCAGAACGTGTCCCAGTATGCGGACAAAGTGCC
TGACGGCGTGCAGGCGATGCTGAAGACTTACCCGGATACGTTTAAAATGAACGTCTATCCGAGCCGCCGCTCCACCTCAG
CGCCACAATGGGTATACGACAACACTAAGAATAATGCCATTAAGGCCAAGCTGGGTGAAACCGGCGTGGATAATGCTTTC
GGTGGCATTCCGTTCCCGATTCTCAGTGGTACTAATGAGCAAAAAGCCAAGCAGGCTGTCTGGAACCATATTTTGCGCTG
GCGCGGTTTGTACGTGGTTCGCCGTGCTTCGGAAGTAGCGGTGCAGCGTAGCGGTGCTTACTCGCTGATTACCTCTCAGC
AGGAAGTGTACTTCCGTTACTATGACCCGAAGTACAATTTTGAAAGCCTGGACAATATCATTTTCTATTACCTGTCCTTT
ACTAAGGCCCCGGCCCGTCTGGCCGGTGGTGCCGTACTGGTACACGAAATGCTGGACCAGAAACAAATGCCACGCCAAGC
CTGGGGGTATAACGCAGGTCAGCGTCGTGTTCGTCGTGCGCCTAACCTAGCATACGATACTCCGATTGCTGCAGCGGATG
GCCTGCGTACTGCCGATGACACCGATATGTATAACGGTGCACCTGACAAGTACAACTGGACGCTAGTCAGCGATAAACCG
GTGGAAATGTTCATCCCGTATAACAACTACAAACTGGATGATCCGAATGTGAAATATGAGACCCTACTGCAAAAGGGGCA
TGTGAATTCGGATTACCAGCGTTGGGAGTTGCATCGCGTTTGGGTGGTGGAAGCCAACCTGAAAGAGGGTGAGCGGCATA
TCTACGCCAAACGCCGTTTCTACATTGATGCGGACTCCTGGCAGATCGCCGCCATCGACCAGTACGACCGTCGTGGTGAG
TTGTGGCGGGTCAGCTTAGCCTATATTAAGAATTACTACGAAGTACCAAGCCAGTGGACCGCACTGGATACGTTCCACGA
TCTGCGCGCCCAGCGTTACCACGTGCAGTTCTTGGATAACGAGGAGTCCTCTATCCTGGATTATAGTCAGCCAGTACCCG
GCGACCGTTATTTCCACCCAGCAGCGCTACGCCGACGCGGCCGTTAA

Upstream 100 bases:

>100_bases
AACAAACTGGCCGACCGGAACAACGCGTCCGTTTCTGTTAAGTACTCTTTCTAATATGTTCCAGGTCGGAGTGCCGGCCT
GTTGTTAACGGAGAGCAATC

Downstream 100 bases:

>100_bases
TTATAAAAAAATGCCGGTTTAATGAAGCCGGAAAGCCAAGGCGACCGGAGTGCTTATGGCACCCGGTTGGTTTTGCTTGG
CCGTGAAGCAGGGCCTTTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 468; Mature: 468

Protein sequence:

>468_residues
MLKKLTAMGGALALSLSVTANVHAGVSSQEAAKLGKSLTPFGAQVKGNGKTISTGLGIPDYTGGIQRKDIPKTYTRPGQH
HPDPYTADKIAFTITAQNVSQYADKVPDGVQAMLKTYPDTFKMNVYPSRRSTSAPQWVYDNTKNNAIKAKLGETGVDNAF
GGIPFPILSGTNEQKAKQAVWNHILRWRGLYVVRRASEVAVQRSGAYSLITSQQEVYFRYYDPKYNFESLDNIIFYYLSF
TKAPARLAGGAVLVHEMLDQKQMPRQAWGYNAGQRRVRRAPNLAYDTPIAAADGLRTADDTDMYNGAPDKYNWTLVSDKP
VEMFIPYNNYKLDDPNVKYETLLQKGHVNSDYQRWELHRVWVVEANLKEGERHIYAKRRFYIDADSWQIAAIDQYDRRGE
LWRVSLAYIKNYYEVPSQWTALDTFHDLRAQRYHVQFLDNEESSILDYSQPVPGDRYFHPAALRRRGR

Sequences:

>Translated_468_residues
MLKKLTAMGGALALSLSVTANVHAGVSSQEAAKLGKSLTPFGAQVKGNGKTISTGLGIPDYTGGIQRKDIPKTYTRPGQH
HPDPYTADKIAFTITAQNVSQYADKVPDGVQAMLKTYPDTFKMNVYPSRRSTSAPQWVYDNTKNNAIKAKLGETGVDNAF
GGIPFPILSGTNEQKAKQAVWNHILRWRGLYVVRRASEVAVQRSGAYSLITSQQEVYFRYYDPKYNFESLDNIIFYYLSF
TKAPARLAGGAVLVHEMLDQKQMPRQAWGYNAGQRRVRRAPNLAYDTPIAAADGLRTADDTDMYNGAPDKYNWTLVSDKP
VEMFIPYNNYKLDDPNVKYETLLQKGHVNSDYQRWELHRVWVVEANLKEGERHIYAKRRFYIDADSWQIAAIDQYDRRGE
LWRVSLAYIKNYYEVPSQWTALDTFHDLRAQRYHVQFLDNEESSILDYSQPVPGDRYFHPAALRRRGR
>Mature_468_residues
MLKKLTAMGGALALSLSVTANVHAGVSSQEAAKLGKSLTPFGAQVKGNGKTISTGLGIPDYTGGIQRKDIPKTYTRPGQH
HPDPYTADKIAFTITAQNVSQYADKVPDGVQAMLKTYPDTFKMNVYPSRRSTSAPQWVYDNTKNNAIKAKLGETGVDNAF
GGIPFPILSGTNEQKAKQAVWNHILRWRGLYVVRRASEVAVQRSGAYSLITSQQEVYFRYYDPKYNFESLDNIIFYYLSF
TKAPARLAGGAVLVHEMLDQKQMPRQAWGYNAGQRRVRRAPNLAYDTPIAAADGLRTADDTDMYNGAPDKYNWTLVSDKP
VEMFIPYNNYKLDDPNVKYETLLQKGHVNSDYQRWELHRVWVVEANLKEGERHIYAKRRFYIDADSWQIAAIDQYDRRGE
LWRVSLAYIKNYYEVPSQWTALDTFHDLRAQRYHVQFLDNEESSILDYSQPVPGDRYFHPAALRRRGR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010752 [H]

Pfam domain/function: PF07044 DUF1329 [H]

EC number: NA

Molecular weight: Translated: 53297; Mature: 53297

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKKLTAMGGALALSLSVTANVHAGVSSQEAAKLGKSLTPFGAQVKGNGKTISTGLGIPD
CCCCHHHCCCEEEEEEEEEEEEECCCCHHHHHHHCCCCCCCCCEEECCCEEEEECCCCCC
YTGGIQRKDIPKTYTRPGQHHPDPYTADKIAFTITAQNVSQYADKVPDGVQAMLKTYPDT
CCCCCCCCCCCHHHCCCCCCCCCCCCCCEEEEEEEHHHHHHHHHHCCHHHHHHHHHCCCC
FKMNVYPSRRSTSAPQWVYDNTKNNAIKAKLGETGVDNAFGGIPFPILSGTNEQKAKQAV
EEEEEECCCCCCCCCCEEECCCCCCEEEEECCCCCCCCCCCCCCCCEECCCCHHHHHHHH
WNHILRWRGLYVVRRASEVAVQRSGAYSLITSQQEVYFRYYDPKYNFESLDNIIFYYLSF
HHHHHHHCCHHEEEHHHHHHHHCCCCEEEEECCCEEEEEEECCCCCHHHHHHHEEEEHHH
TKAPARLAGGAVLVHEMLDQKQMPRQAWGYNAGQRRVRRAPNLAYDTPIAAADGLRTADD
CCCCHHHCCCHHHHHHHHHHHCCCHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
TDMYNGAPDKYNWTLVSDKPVEMFIPYNNYKLDDPNVKYETLLQKGHVNSDYQRWELHRV
CCCCCCCCCCEEEEEECCCCEEEEECCCCEECCCCCCHHHHHHHHCCCCCCCCEEEEEEE
WVVEANLKEGERHIYAKRRFYIDADSWQIAAIDQYDRRGELWRVSLAYIKNYYEVPSQWT
EEEECCCCCCCCEEEEEEEEEEECCCEEEEEECCCCCCCCEEEEHHHHHHHHHHCCCCCH
ALDTFHDLRAQRYHVQFLDNEESSILDYSQPVPGDRYFHPAALRRRGR
HHHHHHHHHHCEEEEEEECCCCCCEECCCCCCCCCCCCCHHHHHHCCC
>Mature Secondary Structure
MLKKLTAMGGALALSLSVTANVHAGVSSQEAAKLGKSLTPFGAQVKGNGKTISTGLGIPD
CCCCHHHCCCEEEEEEEEEEEEECCCCHHHHHHHCCCCCCCCCEEECCCEEEEECCCCCC
YTGGIQRKDIPKTYTRPGQHHPDPYTADKIAFTITAQNVSQYADKVPDGVQAMLKTYPDT
CCCCCCCCCCCHHHCCCCCCCCCCCCCCEEEEEEEHHHHHHHHHHCCHHHHHHHHHCCCC
FKMNVYPSRRSTSAPQWVYDNTKNNAIKAKLGETGVDNAFGGIPFPILSGTNEQKAKQAV
EEEEEECCCCCCCCCCEEECCCCCCEEEEECCCCCCCCCCCCCCCCEECCCCHHHHHHHH
WNHILRWRGLYVVRRASEVAVQRSGAYSLITSQQEVYFRYYDPKYNFESLDNIIFYYLSF
HHHHHHHCCHHEEEHHHHHHHHCCCCEEEEECCCEEEEEEECCCCCHHHHHHHEEEEHHH
TKAPARLAGGAVLVHEMLDQKQMPRQAWGYNAGQRRVRRAPNLAYDTPIAAADGLRTADD
CCCCHHHCCCHHHHHHHHHHHCCCHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
TDMYNGAPDKYNWTLVSDKPVEMFIPYNNYKLDDPNVKYETLLQKGHVNSDYQRWELHRV
CCCCCCCCCCEEEEEECCCCEEEEECCCCEECCCCCCHHHHHHHHCCCCCCCCEEEEEEE
WVVEANLKEGERHIYAKRRFYIDADSWQIAAIDQYDRRGELWRVSLAYIKNYYEVPSQWT
EEEECCCCCCCCEEEEEEEEEEECCCEEEEEECCCCCCCCEEEEHHHHHHHHHHCCCCCH
ALDTFHDLRAQRYHVQFLDNEESSILDYSQPVPGDRYFHPAALRRRGR
HHHHHHHHHHCEEEEEEECCCCCCEECCCCCCCCCCCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]