| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is 110833858
Identifier: 110833858
GI number: 110833858
Start: 1128412
End: 1130901
Strand: Direct
Name: 110833858
Synonym: ABO_0997
Alternate gene names: NA
Gene position: 1128412-1130901 (Clockwise)
Preceding gene: 110833857
Following gene: 110833859
Centisome position: 36.17
GC content: 51.89
Gene sequence:
>2490_bases ATGCATACTTACAAGAAGGTACTGCCGGTGGCTATGGTTATGGCGCTGGCCGCCTGCGGCGGCGGGAGTGAAACCGTACC GGATCAGAGTCAAGGCGCCAGTTTTGACACTCATGCTCGTTTTAATCCTGTCACATTTGATTTGCCGCTGAATACCGATC TGGTTTTTGCAGCAGCAGCAATGTCGGATGGTACGTCGGATATCGGTGCTCCTACGAACCCTGTGGAAGTGGGGATCAAT GCACTGGATGGATTCTCGACGAATGCACCGTTTGATATCTATTTCGCTGGTGGTGAGCTAGATGAAGCTTCCATCAAGGT GTGTCAGCAATCTATGTTGGCTACTGGTGAATGTGCACAATCCAACGTATTCGTGTTGGCACTGAACACGGAGGAAGGCG GGGACCCACTTGATCCAGATGATGTGAATCAAGATGCGCCTTTCCTGTTCCCTCTGGCTGAAGTGTCGGCCTCAGTGATA TCCCTCGATGGTGAACAGAATAATGTATTGAGAATTACGCCGTACAAACCGCTCCTTGCCGCTACCAAGTATCTGGTTTT TGTTACCACCGGCTTGCAAGACACGGATGGCAATTCTGTTAGTGCATCACAAGCTTACAATGTGTTGGGTGAGTCTGAGC CGCCGGTTACGGGAACTTTGTTGTCTGTGCGTAACGCTATTCAGGGCTGGGAAGCGTTGGCTGCGGGCTTTATCGGTGTG GCGTCCGGGGGGGGGATTCCCGCGGAAGGGGCGAAAGCGTCGGTGGTGGTTTCTTATACGTTTACTACTACCGATCCGAT TACCCCTTTGCTGGCGAATGCAGCTCCAAAGGCGGCGATTGTGCAGGCTCAACAGAAAAGCTTTGGCGTGGATCCCAATT TAGCCGTGCAGAATCTTGGCGCCATTCTTATGGAGGGCGTGGATTTGAATTCGCCTGAGCCCCGTGCTGTTTCTGTGTCA GCATCGGGTATTGATGTAAGTGATCTGACAAATGGGGCTCTGGAGGCCGGTGTGGTGTCGTTGTACACCGGGTTAATGGA TATTCCCTATTATTTGCGCACCCCCGAGACAACGATTTCCGGCAATTATAAGCTGGATAGCTGGCAACCAGATCAGGCGC TTGGCGCCGTATTGTTGGCAAAAATAAAAGCAAGCCTTCCTGTAGAAGCAGCATCGCAGCTACCAGCTCAACTGCCTCTG CCTGATGCGGATGGCTCTACTTTCAACGTAACTTATCGGTACCCCTTTGTTGAGCAGGTTAGCCTTGAATCTGTTCCTTT ACAGCTAACACTCCCTAATGGGGCTTATGAAGTTCAGCCTGGTGTTACCTGCGGCATGGCTAAACCAGATGGTTTGCCTG TGGTTATGTATGTGCATGGGATTGGCAGCGACCGCACTTCTGTTGTTTCGCTCGCACATAGCCTTGCTAAAGCCTGTGTG GCAACAGTGGCGATTGATTTACCTTTGCATGGGGCTCGCGCTTTTGAAGAAGGCAATGCCGCATTCAATTTCATTAACTT AGGTGTATTGACCAATACTCGTGACAACCTGCGCCAAAGTGTCATGGACCTGCTGAACCTCAACGCCAGTCTTTCTAATA TCAGCGTAGCGCTTGAAGATGAAGGGATGGTTGGGCTTGATACCCGTGATGTGAAGGTGGTGGGCGTTTCTTTGGGTGGT ATTGTGGGAGCGACTTACGCAACTGTTAACCAGCTGGCAGTGGCTGTGGATGGCCAGTTGGCCGCACAGGCCGCTACCCC GTCATTTGCGAGCAAGCTCAATCCATTGAGCGGCTTGGTGATATCTGCTGCTGGAGGGCAAGTGACTCAGTTGTTGATCA ATTCGGAAAGTTTGGGGCCGTCTATTGAGAATGGTTTGGCAGCAGAAGGCGTTGAGTCGGGCAGCTCTGATTTCGAGAAT TTTTTGTATGTAACGCAAAGCATAGTTGATTCCGGTGACCCGGTGAATTTTGCTGAAATTCTAGCTGGTGCAGCATCATG TGATCCTGTAAAGGCTCAGGCGGGTGATTACGCAAGTATCCTAACCTGTGGCAGCTTGACCATTCCTGTTTTGGTTCAGC AAATTGTCGGTGGCGGTGATGTCTCCGCTTACGGAGACAACGCTGAATACTTGGCCGATCAAGTGGTGCCGAACAGCGCT GACGGAGCCCCCTTGGCAGGGACTACGCCTTTGGCTCGTTTGTTAAACGCTCAGCCAGTAGCTGCTGGAAGCGGGCCTGC TGATGTTACGGATGTGAGTGCCGCTAATGCGTTGGTTAATCTGACCGTGGGTGAGCATGCTTCTTTGTTGACGCCAGGGG ACCCAGCGACGGCTGGAGGTGTCATTGCGTTGACCGAGTTACAGACCGAAACAGTGAGCTTTGTTGTGGCTCCGAACCAG ACCGCAGTGGGTATCACTGAAGTTGATTTGCTTGGCAATGGTTTGGTTTTGGCGCCGACTGCGCCTTATGTGCAGATGCC GACGCGATAG
Upstream 100 bases:
>100_bases ATGTGCCTTCTGTTATTTGTAGTAAGCACCACCGCCGCCCTCCATTGTTGATGTGAGCAACGGCAGGAATTAAATAATAA AAAGAGGTTTGGGAGAGAAG
Downstream 100 bases:
>100_bases TGAGCTGATCTACAGCACAACAAATGGCATCATCAACAACACCCCGCAAGCCGGGGTGTTGTTGTTTTCGTGGATATGAT GTTTGAGCGGTGCTAGGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: Extracellular Lipase; Lipoprotein; MECDP-Synthase; Alpha/Beta Hydrolase Superfamily Protein; Extracellular Lipase Pla-1/Cef Family
Number of amino acids: Translated: 829; Mature: 829
Protein sequence:
>829_residues MHTYKKVLPVAMVMALAACGGGSETVPDQSQGASFDTHARFNPVTFDLPLNTDLVFAAAAMSDGTSDIGAPTNPVEVGIN ALDGFSTNAPFDIYFAGGELDEASIKVCQQSMLATGECAQSNVFVLALNTEEGGDPLDPDDVNQDAPFLFPLAEVSASVI SLDGEQNNVLRITPYKPLLAATKYLVFVTTGLQDTDGNSVSASQAYNVLGESEPPVTGTLLSVRNAIQGWEALAAGFIGV ASGGGIPAEGAKASVVVSYTFTTTDPITPLLANAAPKAAIVQAQQKSFGVDPNLAVQNLGAILMEGVDLNSPEPRAVSVS ASGIDVSDLTNGALEAGVVSLYTGLMDIPYYLRTPETTISGNYKLDSWQPDQALGAVLLAKIKASLPVEAASQLPAQLPL PDADGSTFNVTYRYPFVEQVSLESVPLQLTLPNGAYEVQPGVTCGMAKPDGLPVVMYVHGIGSDRTSVVSLAHSLAKACV ATVAIDLPLHGARAFEEGNAAFNFINLGVLTNTRDNLRQSVMDLLNLNASLSNISVALEDEGMVGLDTRDVKVVGVSLGG IVGATYATVNQLAVAVDGQLAAQAATPSFASKLNPLSGLVISAAGGQVTQLLINSESLGPSIENGLAAEGVESGSSDFEN FLYVTQSIVDSGDPVNFAEILAGAASCDPVKAQAGDYASILTCGSLTIPVLVQQIVGGGDVSAYGDNAEYLADQVVPNSA DGAPLAGTTPLARLLNAQPVAAGSGPADVTDVSAANALVNLTVGEHASLLTPGDPATAGGVIALTELQTETVSFVVAPNQ TAVGITEVDLLGNGLVLAPTAPYVQMPTR
Sequences:
>Translated_829_residues MHTYKKVLPVAMVMALAACGGGSETVPDQSQGASFDTHARFNPVTFDLPLNTDLVFAAAAMSDGTSDIGAPTNPVEVGIN ALDGFSTNAPFDIYFAGGELDEASIKVCQQSMLATGECAQSNVFVLALNTEEGGDPLDPDDVNQDAPFLFPLAEVSASVI SLDGEQNNVLRITPYKPLLAATKYLVFVTTGLQDTDGNSVSASQAYNVLGESEPPVTGTLLSVRNAIQGWEALAAGFIGV ASGGGIPAEGAKASVVVSYTFTTTDPITPLLANAAPKAAIVQAQQKSFGVDPNLAVQNLGAILMEGVDLNSPEPRAVSVS ASGIDVSDLTNGALEAGVVSLYTGLMDIPYYLRTPETTISGNYKLDSWQPDQALGAVLLAKIKASLPVEAASQLPAQLPL PDADGSTFNVTYRYPFVEQVSLESVPLQLTLPNGAYEVQPGVTCGMAKPDGLPVVMYVHGIGSDRTSVVSLAHSLAKACV ATVAIDLPLHGARAFEEGNAAFNFINLGVLTNTRDNLRQSVMDLLNLNASLSNISVALEDEGMVGLDTRDVKVVGVSLGG IVGATYATVNQLAVAVDGQLAAQAATPSFASKLNPLSGLVISAAGGQVTQLLINSESLGPSIENGLAAEGVESGSSDFEN FLYVTQSIVDSGDPVNFAEILAGAASCDPVKAQAGDYASILTCGSLTIPVLVQQIVGGGDVSAYGDNAEYLADQVVPNSA DGAPLAGTTPLARLLNAQPVAAGSGPADVTDVSAANALVNLTVGEHASLLTPGDPATAGGVIALTELQTETVSFVVAPNQ TAVGITEVDLLGNGLVLAPTAPYVQMPTR >Mature_829_residues MHTYKKVLPVAMVMALAACGGGSETVPDQSQGASFDTHARFNPVTFDLPLNTDLVFAAAAMSDGTSDIGAPTNPVEVGIN ALDGFSTNAPFDIYFAGGELDEASIKVCQQSMLATGECAQSNVFVLALNTEEGGDPLDPDDVNQDAPFLFPLAEVSASVI SLDGEQNNVLRITPYKPLLAATKYLVFVTTGLQDTDGNSVSASQAYNVLGESEPPVTGTLLSVRNAIQGWEALAAGFIGV ASGGGIPAEGAKASVVVSYTFTTTDPITPLLANAAPKAAIVQAQQKSFGVDPNLAVQNLGAILMEGVDLNSPEPRAVSVS ASGIDVSDLTNGALEAGVVSLYTGLMDIPYYLRTPETTISGNYKLDSWQPDQALGAVLLAKIKASLPVEAASQLPAQLPL PDADGSTFNVTYRYPFVEQVSLESVPLQLTLPNGAYEVQPGVTCGMAKPDGLPVVMYVHGIGSDRTSVVSLAHSLAKACV ATVAIDLPLHGARAFEEGNAAFNFINLGVLTNTRDNLRQSVMDLLNLNASLSNISVALEDEGMVGLDTRDVKVVGVSLGG IVGATYATVNQLAVAVDGQLAAQAATPSFASKLNPLSGLVISAAGGQVTQLLINSESLGPSIENGLAAEGVESGSSDFEN FLYVTQSIVDSGDPVNFAEILAGAASCDPVKAQAGDYASILTCGSLTIPVLVQQIVGGGDVSAYGDNAEYLADQVVPNSA DGAPLAGTTPLARLLNAQPVAAGSGPADVTDVSAANALVNLTVGEHASLLTPGDPATAGGVIALTELQTETVSFVVAPNQ TAVGITEVDLLGNGLVLAPTAPYVQMPTR
Specific function: Unknown
COG id: COG1073
COG function: function code R; Hydrolases of the alpha/beta superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 84848; Mature: 84848
Theoretical pI: Translated: 3.84; Mature: 3.84
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00283 SOYBEAN_KUNITZ
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHTYKKVLPVAMVMALAACGGGSETVPDQSQGASFDTHARFNPVTFDLPLNTDLVFAAAA CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEEC MSDGTSDIGAPTNPVEVGINALDGFSTNAPFDIYFAGGELDEASIKVCQQSMLATGECAQ CCCCCCCCCCCCCCCEECCEEECCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCC SNVFVLALNTEEGGDPLDPDDVNQDAPFLFPLAEVSASVISLDGEQNNVLRITPYKPLLA CCEEEEEEECCCCCCCCCCCCCCCCCCEEEEHHHHCEEEEEECCCCCCEEEECCCCHHHH ATKYLVFVTTGLQDTDGNSVSASQAYNVLGESEPPVTGTLLSVRNAIQGWEALAAGFIGV HCEEEEEEEECCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEE ASGGGIPAEGAKASVVVSYTFTTTDPITPLLANAAPKAAIVQAQQKSFGVDPNLAVQNLG ECCCCCCCCCCCEEEEEEEEEECCCCCHHHHHCCCCCHHHHEEHHHHCCCCCCHHHHHHH AILMEGVDLNSPEPRAVSVSASGIDVSDLTNGALEAGVVSLYTGLMDIPYYLRTPETTIS HHHHCCCCCCCCCCCEEEEECCCCCHHHHCCCHHHHHHHHHHHHHHCCCEEEECCCEEEC GNYKLDSWQPDQALGAVLLAKIKASLPVEAASQLPAQLPLPDADGSTFNVTYRYPFVEQV CCEEECCCCCHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCEEEEEEECCCCEEC SLESVPLQLTLPNGAYEVQPGVTCGMAKPDGLPVVMYVHGIGSDRTSVVSLAHSLAKACV CCCCCCEEEEECCCCEEECCCCEECCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHH ATVAIDLPLHGARAFEEGNAAFNFINLGVLTNTRDNLRQSVMDLLNLNASLSNISVALED HHEEEECCCCCCHHHCCCCCEEEEEEEEEEECCHHHHHHHHHHHHHCCCCCCEEEEEEEC EGMVGLDTRDVKVVGVSLGGIVGATYATVNQLAVAVDGQLAAQAATPSFASKLNPLSGLV CCEEECCCCCEEEEEEECCCHHHHHHHHHHHEEEEECCCHHHHHCCCHHHHHCCCCCCEE ISAAGGQVTQLLINSESLGPSIENGLAAEGVESGSSDFENFLYVTQSIVDSGDPVNFAEI EEECCCCEEEEEEECCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHH LAGAASCDPVKAQAGDYASILTCGSLTIPVLVQQIVGGGDVSAYGDNAEYLADQVVPNSA HCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCEEECCCCHHHHHHHCCCCCC DGAPLAGTTPLARLLNAQPVAAGSGPADVTDVSAANALVNLTVGEHASLLTPGDPATAGG CCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEECCCCCCCCCC VIALTELQTETVSFVVAPNQTAVGITEVDLLGNGLVLAPTAPYVQMPTR EEEEEEECEEEEEEEECCCCCEECEEEEEECCCCEEEECCCCCEECCCC >Mature Secondary Structure MHTYKKVLPVAMVMALAACGGGSETVPDQSQGASFDTHARFNPVTFDLPLNTDLVFAAAA CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEEC MSDGTSDIGAPTNPVEVGINALDGFSTNAPFDIYFAGGELDEASIKVCQQSMLATGECAQ CCCCCCCCCCCCCCCEECCEEECCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCC SNVFVLALNTEEGGDPLDPDDVNQDAPFLFPLAEVSASVISLDGEQNNVLRITPYKPLLA CCEEEEEEECCCCCCCCCCCCCCCCCCEEEEHHHHCEEEEEECCCCCCEEEECCCCHHHH ATKYLVFVTTGLQDTDGNSVSASQAYNVLGESEPPVTGTLLSVRNAIQGWEALAAGFIGV HCEEEEEEEECCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEE ASGGGIPAEGAKASVVVSYTFTTTDPITPLLANAAPKAAIVQAQQKSFGVDPNLAVQNLG ECCCCCCCCCCCEEEEEEEEEECCCCCHHHHHCCCCCHHHHEEHHHHCCCCCCHHHHHHH AILMEGVDLNSPEPRAVSVSASGIDVSDLTNGALEAGVVSLYTGLMDIPYYLRTPETTIS HHHHCCCCCCCCCCCEEEEECCCCCHHHHCCCHHHHHHHHHHHHHHCCCEEEECCCEEEC GNYKLDSWQPDQALGAVLLAKIKASLPVEAASQLPAQLPLPDADGSTFNVTYRYPFVEQV CCEEECCCCCHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCEEEEEEECCCCEEC SLESVPLQLTLPNGAYEVQPGVTCGMAKPDGLPVVMYVHGIGSDRTSVVSLAHSLAKACV CCCCCCEEEEECCCCEEECCCCEECCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHH ATVAIDLPLHGARAFEEGNAAFNFINLGVLTNTRDNLRQSVMDLLNLNASLSNISVALED HHEEEECCCCCCHHHCCCCCEEEEEEEEEEECCHHHHHHHHHHHHHCCCCCCEEEEEEEC EGMVGLDTRDVKVVGVSLGGIVGATYATVNQLAVAVDGQLAAQAATPSFASKLNPLSGLV CCEEECCCCCEEEEEEECCCHHHHHHHHHHHEEEEECCCHHHHHCCCHHHHHCCCCCCEE ISAAGGQVTQLLINSESLGPSIENGLAAEGVESGSSDFENFLYVTQSIVDSGDPVNFAEI EEECCCCEEEEEEECCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHH LAGAASCDPVKAQAGDYASILTCGSLTIPVLVQQIVGGGDVSAYGDNAEYLADQVVPNSA HCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCEEECCCCHHHHHHHCCCCCC DGAPLAGTTPLARLLNAQPVAAGSGPADVTDVSAANALVNLTVGEHASLLTPGDPATAGG CCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEECCCCCCCCCC VIALTELQTETVSFVVAPNQTAVGITEVDLLGNGLVLAPTAPYVQMPTR EEEEEEECEEEEEEEECCCCCEECEEEEEECCCCEEEECCCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA