| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is yeaC [C]
Identifier: 110833857
GI number: 110833857
Start: 1127860
End: 1128132
Strand: Direct
Name: yeaC [C]
Synonym: ABO_0996
Alternate gene names: 110833857
Gene position: 1127860-1128132 (Clockwise)
Preceding gene: 110833856
Following gene: 110833858
Centisome position: 36.15
GC content: 49.45
Gene sequence:
>273_bases ATGAGTTACCAGAGTTTTGACGACCTGATTGCGAGTATGGATCAGAACATTTGCGATAACATGCGTCGCGCTATTGAAAC GGGTAAGTGGGCCGATGGTCGCGTTTTATCCCGCGAGCAAAAAGAGCTTTGTCTTCAGGCTGTTATTGCTTGGGAAACCC AGAATTTACCTGAAGAGCAACGTAGCGGTTATATGGAGCAGGCCTGTAAAAGCGGGGAGGAAAAAACCGAGGATCAGCCG GTAACTCTGCGTGGCCCGGATACTCTGCAGTAA
Upstream 100 bases:
>100_bases GCCCGGTGACAACAATTAGGCCGAGTAATACTGTATAGGCCGTGGGCCGCCCAAATCTATGTAGCGTGTCGCGTACCGTG ACCTTTTGAAGAGTTAAACC
Downstream 100 bases:
>100_bases ACATATTATAATGAGATAAATCGTTTTGACCGGCGAGTCGTCCCTGAAAAAATGCCTGCGGGCGTTTCCCGCCGTTATTC TCCTCAATATCGCATTGGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 90; Mature: 89
Protein sequence:
>90_residues MSYQSFDDLIASMDQNICDNMRRAIETGKWADGRVLSREQKELCLQAVIAWETQNLPEEQRSGYMEQACKSGEEKTEDQP VTLRGPDTLQ
Sequences:
>Translated_90_residues MSYQSFDDLIASMDQNICDNMRRAIETGKWADGRVLSREQKELCLQAVIAWETQNLPEEQRSGYMEQACKSGEEKTEDQP VTLRGPDTLQ >Mature_89_residues SYQSFDDLIASMDQNICDNMRRAIETGKWADGRVLSREQKELCLQAVIAWETQNLPEEQRSGYMEQACKSGEEKTEDQPV TLRGPDTLQ
Specific function: Unknown
COG id: COG3139
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10314; Mature: 10182
Theoretical pI: Translated: 4.20; Mature: 4.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 7.8 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYQSFDDLIASMDQNICDNMRRAIETGKWADGRVLSREQKELCLQAVIAWETQNLPEEQ CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHH RSGYMEQACKSGEEKTEDQPVTLRGPDTLQ HCCHHHHHHHCCCCCCCCCCEEECCCCCCC >Mature Secondary Structure SYQSFDDLIASMDQNICDNMRRAIETGKWADGRVLSREQKELCLQAVIAWETQNLPEEQ CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHH RSGYMEQACKSGEEKTEDQPVTLRGPDTLQ HCCHHHHHHHCCCCCCCCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA