| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is yfjB
Identifier: 110833856
GI number: 110833856
Start: 1126876
End: 1127778
Strand: Direct
Name: yfjB
Synonym: ABO_0995
Alternate gene names: 110833856
Gene position: 1126876-1127778 (Clockwise)
Preceding gene: 110833855
Following gene: 110833857
Centisome position: 36.12
GC content: 53.93
Gene sequence:
>903_bases ATGAGATCCCTTGTGGCGCAAGAGAAATTTCGCAACATCGGTTTGATCGCACGGTCTGAAAGTGAGCAGGCGCTCTACTC ATTACGCCAGCTCATTCATTTTCTGCATGGCCGTGATTGCACCGTTATCCTCGATAAACACATTATTGGTCATCTTCCGG AAATGGGATTGCAGGCTGCTAGTGCCTCACAAATGGGGGAAGCCTGCGATCTGGTGATTGTGGTGGGAGGGGACGGTAGT CTGCTAGGTGCTGCGCGTACCCTGGCTCGCTATAAAGTGCCGGTATTGGGCGTGAATCGGGGCCATCTGGGCTTTCTCAC CGATATCCTTCCTTCTGAAATTGAATCCCGGGTCGGCCAGGTGCTGGATGGTGAATACAGTACCGAAAAACGGTTCTTGT TGGATCTGGAAGTGCGCCGGGGTAGGACCGTGGTCGGCGAGGGGAGCGCTCTCAACGATATCGTGCTGCTATCCGGTGAC AGTGTACACATGATCGATTTTGAGTTGATGATCGACGGACACTTTGTCTACGGGCAGCGCTCCGACGGGCTGATTGTTTC TACGCCCACCGGTTCCACCGCCTATGCGTTGTCCGGTGGTGGGCCAATCATGCACCCTAAGCTGGATGCCATGGTCTTGG TTCCCCTAAACCCCCACACCCTGACCAGTCGCCCCTTGGTGGTAGCTGGGGATAGTGAAATCAAAATTCACATCACCACA GAAAAAGTGCGGCCGTTGGTCAGTTGCGATGGCACAGAGGGGATTCGCTTGCAGGTTGACGATGTCATTGCGATTCGCAA AAAACCTCACCGCTTACATTTGATTCATCCCCCGGGGCACGATTTCTATCAGGCTTGTCGGTCTAAATTGGGCTGGAGTT CCCGGCCCGGTGACAACAATTAG
Upstream 100 bases:
>100_bases TGCTGTTACCCTGAACGAGTACCTGACTCAGGGGTAGTGCTTGCCGGTTGGTGAGGCTGCCCAGTCCGGCTTCCGCAACA ACCTAAGCAGCACTACCTGA
Downstream 100 bases:
>100_bases GCCGAGTAATACTGTATAGGCCGTGGGCCGCCCAAATCTATGTAGCGTGTCGCGTACCGTGACCTTTTGAAGAGTTAAAC CATGAGTTACCAGAGTTTTG
Product: nicotinamide adenine dinucleotide kinase
Products: NA
Alternate protein names: Poly(P)/ATP NAD kinase
Number of amino acids: Translated: 300; Mature: 300
Protein sequence:
>300_residues MRSLVAQEKFRNIGLIARSESEQALYSLRQLIHFLHGRDCTVILDKHIIGHLPEMGLQAASASQMGEACDLVIVVGGDGS LLGAARTLARYKVPVLGVNRGHLGFLTDILPSEIESRVGQVLDGEYSTEKRFLLDLEVRRGRTVVGEGSALNDIVLLSGD SVHMIDFELMIDGHFVYGQRSDGLIVSTPTGSTAYALSGGGPIMHPKLDAMVLVPLNPHTLTSRPLVVAGDSEIKIHITT EKVRPLVSCDGTEGIRLQVDDVIAIRKKPHRLHLIHPPGHDFYQACRSKLGWSSRPGDNN
Sequences:
>Translated_300_residues MRSLVAQEKFRNIGLIARSESEQALYSLRQLIHFLHGRDCTVILDKHIIGHLPEMGLQAASASQMGEACDLVIVVGGDGS LLGAARTLARYKVPVLGVNRGHLGFLTDILPSEIESRVGQVLDGEYSTEKRFLLDLEVRRGRTVVGEGSALNDIVLLSGD SVHMIDFELMIDGHFVYGQRSDGLIVSTPTGSTAYALSGGGPIMHPKLDAMVLVPLNPHTLTSRPLVVAGDSEIKIHITT EKVRPLVSCDGTEGIRLQVDDVIAIRKKPHRLHLIHPPGHDFYQACRSKLGWSSRPGDNN >Mature_300_residues MRSLVAQEKFRNIGLIARSESEQALYSLRQLIHFLHGRDCTVILDKHIIGHLPEMGLQAASASQMGEACDLVIVVGGDGS LLGAARTLARYKVPVLGVNRGHLGFLTDILPSEIESRVGQVLDGEYSTEKRFLLDLEVRRGRTVVGEGSALNDIVLLSGD SVHMIDFELMIDGHFVYGQRSDGLIVSTPTGSTAYALSGGGPIMHPKLDAMVLVPLNPHTLTSRPLVVAGDSEIKIHITT EKVRPLVSCDGTEGIRLQVDDVIAIRKKPHRLHLIHPPGHDFYQACRSKLGWSSRPGDNN
Specific function: Catalyzes the phosphorylation of NAD to NADP. Utilizes ATP and other nucleoside triphosphates as well as inorganic polyphosphate as a source of phosphorus
COG id: COG0061
COG function: function code G; Predicted sugar kinase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NAD kinase family
Homologues:
Organism=Homo sapiens, GI55743112, Length=255, Percent_Identity=31.3725490196078, Blast_Score=104, Evalue=1e-22, Organism=Escherichia coli, GI1788968, Length=286, Percent_Identity=42.3076923076923, Blast_Score=248, Evalue=4e-67, Organism=Saccharomyces cerevisiae, GI6322509, Length=242, Percent_Identity=29.7520661157025, Blast_Score=122, Evalue=1e-28, Organism=Saccharomyces cerevisiae, GI6320794, Length=242, Percent_Identity=28.5123966942149, Blast_Score=119, Evalue=7e-28, Organism=Saccharomyces cerevisiae, GI6325068, Length=290, Percent_Identity=26.8965517241379, Blast_Score=105, Evalue=6e-24, Organism=Drosophila melanogaster, GI28573832, Length=201, Percent_Identity=33.3333333333333, Blast_Score=93, Evalue=2e-19, Organism=Drosophila melanogaster, GI28573830, Length=201, Percent_Identity=33.3333333333333, Blast_Score=93, Evalue=2e-19, Organism=Drosophila melanogaster, GI28573828, Length=201, Percent_Identity=33.3333333333333, Blast_Score=93, Evalue=2e-19, Organism=Drosophila melanogaster, GI161077047, Length=206, Percent_Identity=32.5242718446602, Blast_Score=93, Evalue=3e-19, Organism=Drosophila melanogaster, GI28573826, Length=206, Percent_Identity=32.5242718446602, Blast_Score=92, Evalue=3e-19, Organism=Drosophila melanogaster, GI20129957, Length=277, Percent_Identity=26.3537906137184, Blast_Score=82, Evalue=4e-16, Organism=Drosophila melanogaster, GI24653422, Length=277, Percent_Identity=26.3537906137184, Blast_Score=82, Evalue=5e-16, Organism=Drosophila melanogaster, GI281363321, Length=277, Percent_Identity=26.3537906137184, Blast_Score=82, Evalue=5e-16, Organism=Drosophila melanogaster, GI281363323, Length=279, Percent_Identity=26.5232974910394, Blast_Score=82, Evalue=5e-16, Organism=Drosophila melanogaster, GI24653424, Length=279, Percent_Identity=26.5232974910394, Blast_Score=82, Evalue=6e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PPNK_ALCBS (Q0VQV5)
Other databases:
- EMBL: AM286690 - RefSeq: YP_692715.1 - ProteinModelPortal: Q0VQV5 - SMR: Q0VQV5 - STRING: Q0VQV5 - GeneID: 4211794 - GenomeReviews: AM286690_GR - KEGG: abo:ABO_0995 - NMPDR: fig|393595.12.peg.1002 - eggNOG: COG0061 - HOGENOM: HBG713904 - OMA: FESFMID - PhylomeDB: Q0VQV5 - BioCyc: ABOR393595:ABO_0995-MONOMER - GO: GO:0005737 - HAMAP: MF_00361 - InterPro: IPR016064 - InterPro: IPR017438 - InterPro: IPR017437 - InterPro: IPR002504 - Gene3D: G3DSA:2.60.200.30 - Gene3D: G3DSA:3.40.50.10330 - PANTHER: PTHR20275
Pfam domain/function: PF01513 NAD_kinase; SSF111331 ATP-NAD_kinase_PpnK-typ
EC number: =2.7.1.23
Molecular weight: Translated: 32683; Mature: 32683
Theoretical pI: Translated: 7.04; Mature: 7.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSLVAQEKFRNIGLIARSESEQALYSLRQLIHFLHGRDCTVILDKHIIGHLPEMGLQAA CCCHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHCCCCEEEEEECHHHHCCCHHCCHHH SASQMGEACDLVIVVGGDGSLLGAARTLARYKVPVLGVNRGHLGFLTDILPSEIESRVGQ CHHHCCCCCCEEEEECCCCCHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHH VLDGEYSTEKRFLLDLEVRRGRTVVGEGSALNDIVLLSGDSVHMIDFELMIDGHFVYGQR HHCCCCCCCCEEEEEEEECCCCEEEECCCCCCEEEEEECCCEEEEEEEEEEECEEEECCC SDGLIVSTPTGSTAYALSGGGPIMHPKLDAMVLVPLNPHTLTSRPLVVAGDSEIKIHITT CCCEEEECCCCCEEEEEECCCCEECCCCCEEEEEECCCCCCCCCCEEEECCCEEEEEEEH EKVRPLVSCDGTEGIRLQVDDVIAIRKKPHRLHLIHPPGHDFYQACRSKLGWSSRPGDNN HHCCEEEECCCCCCEEEEECCEEEECCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MRSLVAQEKFRNIGLIARSESEQALYSLRQLIHFLHGRDCTVILDKHIIGHLPEMGLQAA CCCHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHCCCCEEEEEECHHHHCCCHHCCHHH SASQMGEACDLVIVVGGDGSLLGAARTLARYKVPVLGVNRGHLGFLTDILPSEIESRVGQ CHHHCCCCCCEEEEECCCCCHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHH VLDGEYSTEKRFLLDLEVRRGRTVVGEGSALNDIVLLSGDSVHMIDFELMIDGHFVYGQR HHCCCCCCCCEEEEEEEECCCCEEEECCCCCCEEEEEECCCEEEEEEEEEEECEEEECCC SDGLIVSTPTGSTAYALSGGGPIMHPKLDAMVLVPLNPHTLTSRPLVVAGDSEIKIHITT CCCEEEECCCCCEEEEEECCCCEECCCCCEEEEEECCCCCCCCCCEEEECCCEEEEEEEH EKVRPLVSCDGTEGIRLQVDDVIAIRKKPHRLHLIHPPGHDFYQACRSKLGWSSRPGDNN HHCCEEEECCCCCCEEEEECCEEEECCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA