| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is 110833854
Identifier: 110833854
GI number: 110833854
Start: 1124245
End: 1125603
Strand: Direct
Name: 110833854
Synonym: ABO_0993
Alternate gene names: NA
Gene position: 1124245-1125603 (Clockwise)
Preceding gene: 110833853
Following gene: 110833855
Centisome position: 36.03
GC content: 53.79
Gene sequence:
>1359_bases ATGGCAGCATCCTCTGTTACCTCGGAAGCAATTCTGTTTTTTGACCACCGGGGTATTTCCAAAAGCATGCTCTACGCCGA TTTTGAAGCCATTCTCGATGGCATGGTGGGGATGCCGGAATTTGCAGATAAAGAGGTGCGATGCGCTTATTGTTTGGTCA ACGGTCAGTTACGGGTTCGCTCTGTAGTGTTATTTACCATCGATTTTGATGAGGATGGCATGGCCGATACCACCTGGAAT GTGCCGTTACGGCATTTGGCGGAGCATGCGGGTCAAGGGCCCGACATGGGGGCTGGACCGATTCGTCTTGCCTGCCGTAG CCAATGCCCGGTGGCCTGGCACCAGGATCAAATGTGGGACCCTGGCATGAAGCCCGGCGCCAACGATTTTATTGTTATCC GTGACTCCATCCGAGAGCGTGGCCCGAAAATGGGCCTGGTAATGGATGATGAAATGGAGGCTGTGCCTATTGTGATTGGG GCGTCTGCACCGACGGTCGGCCTGGAGAGAAAGGATGTCGAGAAGAAGGCGGATCAAGAACGGGTAAGGCTGGCTCGCAT TATCAAGGAGCTGCGCCTGCGGGTGCAAACCCTGGAAAACACCCAGTCAGAAGACGCGGCTAAGGTGCGCTATGCGGCCC AGCAAAAAGAAGAAATTCTTATTGCTCAGTTGGAAAAGGTAATGGGGCAGTTCAAGGCAATCAAATCGCAGAATGGAGCA TTGCGAGAGCAGAATGATTCCTTGAAGGGGCAATTATTATCCCTCAACCAAAGTTTGGAAGAGCAGAACCGGCGCAGTGA GCATCAGGGTAGTGAGATGGAGGTGCTGACTGAGCAGTACAAGCTGGCGTTGGAGCAGCGCCTGGAAGAGGAGCGGGCGA AGATGTCAGAGCAGCTACACTCGCTGGAAATGGATGTGCTGACCCGTGATGATCTTATCGGCCAGCTTCGCGAGGAAATT TCTGAGCAGAAACGCAACAAGCTGAAAGATGCCAACAGCGGAGCACAGAAGACGCTGGAGAAGCTTGAAGAGCTGGGGTT GAGTTTTATTGCGTTTCATCCTGGTGCCGGGCATATCTCCATTGCAGCCGATCAGGTGGCCGGTTACATGGAGAATCCCA CTGCCTTTGCGGCGCGCAAATGCCTAGTCACCGAGGATCATTATCGTGCTTGGCTATCCCATTATGAAAGCCCGACCTGC CAGGTGCCTATAGGCGCGGAGGGGGCTCCCTGTGGTAAGCGAGTGATTCGTGTGGAAGTTCCCAATCAGTTCAAGCCGGG GGTGTCTGATTGCAACGCTAACCGCTGCCAGAACTGCCGCAATGATTCCGCCATCGATAACGTACTGCGATTCCGCTAA
Upstream 100 bases:
>100_bases ACTGCAGTGTGACGGCGGGTGTCAGATTGTGAATGACGCACCTTGGTCGGTGTGCTTGTGCCAACCAACAATAAATAACT TCATAAGAAGGACAGACAGC
Downstream 100 bases:
>100_bases GTCGGCAATTGTGAACTGGTTCCGCCAGGTGCTTGATTGGTAAGCTTTTTGCAGCGTATTTCTCCGATGAGGGTTTCGGC CCGCGCCACGCTTGTATTCA
Product: hypothetical protein
Products: NA
Alternate protein names: ATPase Involved In DNA Repair; DNA Repair ATPase; Chromosome Segregation ATPase
Number of amino acids: Translated: 452; Mature: 451
Protein sequence:
>452_residues MAASSVTSEAILFFDHRGISKSMLYADFEAILDGMVGMPEFADKEVRCAYCLVNGQLRVRSVVLFTIDFDEDGMADTTWN VPLRHLAEHAGQGPDMGAGPIRLACRSQCPVAWHQDQMWDPGMKPGANDFIVIRDSIRERGPKMGLVMDDEMEAVPIVIG ASAPTVGLERKDVEKKADQERVRLARIIKELRLRVQTLENTQSEDAAKVRYAAQQKEEILIAQLEKVMGQFKAIKSQNGA LREQNDSLKGQLLSLNQSLEEQNRRSEHQGSEMEVLTEQYKLALEQRLEEERAKMSEQLHSLEMDVLTRDDLIGQLREEI SEQKRNKLKDANSGAQKTLEKLEELGLSFIAFHPGAGHISIAADQVAGYMENPTAFAARKCLVTEDHYRAWLSHYESPTC QVPIGAEGAPCGKRVIRVEVPNQFKPGVSDCNANRCQNCRNDSAIDNVLRFR
Sequences:
>Translated_452_residues MAASSVTSEAILFFDHRGISKSMLYADFEAILDGMVGMPEFADKEVRCAYCLVNGQLRVRSVVLFTIDFDEDGMADTTWN VPLRHLAEHAGQGPDMGAGPIRLACRSQCPVAWHQDQMWDPGMKPGANDFIVIRDSIRERGPKMGLVMDDEMEAVPIVIG ASAPTVGLERKDVEKKADQERVRLARIIKELRLRVQTLENTQSEDAAKVRYAAQQKEEILIAQLEKVMGQFKAIKSQNGA LREQNDSLKGQLLSLNQSLEEQNRRSEHQGSEMEVLTEQYKLALEQRLEEERAKMSEQLHSLEMDVLTRDDLIGQLREEI SEQKRNKLKDANSGAQKTLEKLEELGLSFIAFHPGAGHISIAADQVAGYMENPTAFAARKCLVTEDHYRAWLSHYESPTC QVPIGAEGAPCGKRVIRVEVPNQFKPGVSDCNANRCQNCRNDSAIDNVLRFR >Mature_451_residues AASSVTSEAILFFDHRGISKSMLYADFEAILDGMVGMPEFADKEVRCAYCLVNGQLRVRSVVLFTIDFDEDGMADTTWNV PLRHLAEHAGQGPDMGAGPIRLACRSQCPVAWHQDQMWDPGMKPGANDFIVIRDSIRERGPKMGLVMDDEMEAVPIVIGA SAPTVGLERKDVEKKADQERVRLARIIKELRLRVQTLENTQSEDAAKVRYAAQQKEEILIAQLEKVMGQFKAIKSQNGAL REQNDSLKGQLLSLNQSLEEQNRRSEHQGSEMEVLTEQYKLALEQRLEEERAKMSEQLHSLEMDVLTRDDLIGQLREEIS EQKRNKLKDANSGAQKTLEKLEELGLSFIAFHPGAGHISIAADQVAGYMENPTAFAARKCLVTEDHYRAWLSHYESPTCQ VPIGAEGAPCGKRVIRVEVPNQFKPGVSDCNANRCQNCRNDSAIDNVLRFR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50668; Mature: 50537
Theoretical pI: Translated: 5.30; Mature: 5.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAASSVTSEAILFFDHRGISKSMLYADFEAILDGMVGMPEFADKEVRCAYCLVNGQLRVR CCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCEEEE SVVLFTIDFDEDGMADTTWNVPLRHLAEHAGQGPDMGAGPIRLACRSQCPVAWHQDQMWD EEEEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCC PGMKPGANDFIVIRDSIRERGPKMGLVMDDEMEAVPIVIGASAPTVGLERKDVEKKADQE CCCCCCCCCEEEEEHHHHHCCCCCCEEECCCCCEEEEEEECCCCCCCCCHHHHHHHHHHH RVRLARIIKELRLRVQTLENTQSEDAAKVRYAAQQKEEILIAQLEKVMGQFKAIKSQNGA HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC LREQNDSLKGQLLSLNQSLEEQNRRSEHQGSEMEVLTEQYKLALEQRLEEERAKMSEQLH CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLEMDVLTRDDLIGQLREEISEQKRNKLKDANSGAQKTLEKLEELGLSFIAFHPGAGHIS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEECCCCCEEE IAADQVAGYMENPTAFAARKCLVTEDHYRAWLSHYESPTCQVPIGAEGAPCGKRVIRVEV EEHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCEEECCCCCCCCCCCEEEEEEC PNQFKPGVSDCNANRCQNCRNDSAIDNVLRFR CCCCCCCCCCCCCHHHHCCCCCHHHHHHHHCC >Mature Secondary Structure AASSVTSEAILFFDHRGISKSMLYADFEAILDGMVGMPEFADKEVRCAYCLVNGQLRVR CCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCEEEE SVVLFTIDFDEDGMADTTWNVPLRHLAEHAGQGPDMGAGPIRLACRSQCPVAWHQDQMWD EEEEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCC PGMKPGANDFIVIRDSIRERGPKMGLVMDDEMEAVPIVIGASAPTVGLERKDVEKKADQE CCCCCCCCCEEEEEHHHHHCCCCCCEEECCCCCEEEEEEECCCCCCCCCHHHHHHHHHHH RVRLARIIKELRLRVQTLENTQSEDAAKVRYAAQQKEEILIAQLEKVMGQFKAIKSQNGA HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC LREQNDSLKGQLLSLNQSLEEQNRRSEHQGSEMEVLTEQYKLALEQRLEEERAKMSEQLH CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLEMDVLTRDDLIGQLREEISEQKRNKLKDANSGAQKTLEKLEELGLSFIAFHPGAGHIS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEECCCCCEEE IAADQVAGYMENPTAFAARKCLVTEDHYRAWLSHYESPTCQVPIGAEGAPCGKRVIRVEV EEHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCEEECCCCCCCCCCCEEEEEEC PNQFKPGVSDCNANRCQNCRNDSAIDNVLRFR CCCCCCCCCCCCCHHHHCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA