| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is 110833843
Identifier: 110833843
GI number: 110833843
Start: 1107473
End: 1107685
Strand: Direct
Name: 110833843
Synonym: ABO_0982
Alternate gene names: NA
Gene position: 1107473-1107685 (Clockwise)
Preceding gene: 110833842
Following gene: 110833844
Centisome position: 35.49
GC content: 42.72
Gene sequence:
>213_bases ATGGCAGGCACACGATATTGGTTAGCCTTTGTCAGCGATTATCATTTGTATCGCACTCTGGCTACTGCTTACTTTGCTCT GAAATTTAAAAATAGAATTCTACGTAGCGATCGGAAGACGGTAACCTTTACGCTACAACACGCTAAGGATATTGACTGGC TGAAAGCACTTTTTCCGGCCCCCACCTTATTTCGTAATGCTTTGTGTGATTGA
Upstream 100 bases:
>100_bases CGCAATTCCGCAACGTTAGCATTGGCATTGCCAACACAAAGAAGAGCCCATTCCGGATACCCTAAAAATAACGGTGGTGT AGTCACGCGAGGTTGTAGCG
Downstream 100 bases:
>100_bases ACAGAATGAAATGGGTGAGAGAGGCCTTTCTACCTACATATCGAGTCTCTTTGCCGCTTGAGCGTGTAACTCCTGGGAGG ATGTAATGCTTGATGCCTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 70; Mature: 69
Protein sequence:
>70_residues MAGTRYWLAFVSDYHLYRTLATAYFALKFKNRILRSDRKTVTFTLQHAKDIDWLKALFPAPTLFRNALCD
Sequences:
>Translated_70_residues MAGTRYWLAFVSDYHLYRTLATAYFALKFKNRILRSDRKTVTFTLQHAKDIDWLKALFPAPTLFRNALCD >Mature_69_residues AGTRYWLAFVSDYHLYRTLATAYFALKFKNRILRSDRKTVTFTLQHAKDIDWLKALFPAPTLFRNALCD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8274; Mature: 8143
Theoretical pI: Translated: 10.38; Mature: 10.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGTRYWLAFVSDYHLYRTLATAYFALKFKNRILRSDRKTVTFTLQHAKDIDWLKALFPA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHCCC PTLFRNALCD HHHHHHHCCC >Mature Secondary Structure AGTRYWLAFVSDYHLYRTLATAYFALKFKNRILRSDRKTVTFTLQHAKDIDWLKALFPA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHCCC PTLFRNALCD HHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA