| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is 110833812
Identifier: 110833812
GI number: 110833812
Start: 1070853
End: 1071281
Strand: Direct
Name: 110833812
Synonym: ABO_0951
Alternate gene names: NA
Gene position: 1070853-1071281 (Clockwise)
Preceding gene: 110833811
Following gene: 110833813
Centisome position: 34.32
GC content: 51.52
Gene sequence:
>429_bases TTGGATAATGAATCCATCGTTTACGGCTGCATTAAGCATTTACCGTTTGGTAATTTGCAGGAGCGTAAGACGAGTTGTTT TCAAAACCGCAAGGCCATTCGGCAATTACCGCAGGCAGACGAATGGCCGTTTCTGTGTCGGGAAATGTTTTGCGTACCCG GAGACGACTTGATGGGCGGCACCTTCCAGACTCAGGTGATTCATTTCGGTATGTCTTACCGTGCGGTGGAGTACGAGTGG GAGCACTGGATCGCTAAATTTGAATCTCTGCTCAAGAATATGTACTGGGTGAATGCGGTGGTGCACTTGGAAACTGAATT GTCCGGGTTTCATACCTTCGTGTGGGATAGTGCCGACGCGTACCACGCACCCTCTGACGCGCCTTTACGGGTGCGTTGCG AGTGGGCCCGTGAAGGGGCTATTTCCTGA
Upstream 100 bases:
>100_bases AAAACTCCCTGCCTTATGACGGGGTTTGATTTGAATGGTGCTTGATTGTTACTTGTCGCGGTAAGCTAGAGTTTGTAGCT GATTTTCCCTGGGGTGTTTT
Downstream 100 bases:
>100_bases ATCTTTGCTTCAACGTTAAGGCCTGCTTGAGTGCCTGATTAGAGCCTTCCGCCTGTGCAAATAATCTTTTTCCATTTGCC ATTATTTCCTCTCTTGCTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 142; Mature: 142
Protein sequence:
>142_residues MDNESIVYGCIKHLPFGNLQERKTSCFQNRKAIRQLPQADEWPFLCREMFCVPGDDLMGGTFQTQVIHFGMSYRAVEYEW EHWIAKFESLLKNMYWVNAVVHLETELSGFHTFVWDSADAYHAPSDAPLRVRCEWAREGAIS
Sequences:
>Translated_142_residues MDNESIVYGCIKHLPFGNLQERKTSCFQNRKAIRQLPQADEWPFLCREMFCVPGDDLMGGTFQTQVIHFGMSYRAVEYEW EHWIAKFESLLKNMYWVNAVVHLETELSGFHTFVWDSADAYHAPSDAPLRVRCEWAREGAIS >Mature_142_residues MDNESIVYGCIKHLPFGNLQERKTSCFQNRKAIRQLPQADEWPFLCREMFCVPGDDLMGGTFQTQVIHFGMSYRAVEYEW EHWIAKFESLLKNMYWVNAVVHLETELSGFHTFVWDSADAYHAPSDAPLRVRCEWAREGAIS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16581; Mature: 16581
Theoretical pI: Translated: 5.53; Mature: 5.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDNESIVYGCIKHLPFGNLQERKTSCFQNRKAIRQLPQADEWPFLCREMFCVPGDDLMGG CCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCC TFQTQVIHFGMSYRAVEYEWEHWIAKFESLLKNMYWVNAVVHLETELSGFHTFVWDSADA CHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCEEEEEECCCCC YHAPSDAPLRVRCEWAREGAIS CCCCCCCCEEEEEEECCCCCCC >Mature Secondary Structure MDNESIVYGCIKHLPFGNLQERKTSCFQNRKAIRQLPQADEWPFLCREMFCVPGDDLMGG CCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCC TFQTQVIHFGMSYRAVEYEWEHWIAKFESLLKNMYWVNAVVHLETELSGFHTFVWDSADA CHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCEEEEEECCCCC YHAPSDAPLRVRCEWAREGAIS CCCCCCCCEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA