Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

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The map label for this gene is 110833811

Identifier: 110833811

GI number: 110833811

Start: 1070140

End: 1070721

Strand: Direct

Name: 110833811

Synonym: ABO_0950

Alternate gene names: NA

Gene position: 1070140-1070721 (Clockwise)

Preceding gene: 110833810

Following gene: 110833812

Centisome position: 34.3

GC content: 54.3

Gene sequence:

>582_bases
ATGAAAGTCTGGCTAACCCTGCTTTTGGTAGTACTATTTCTGAGTGGCTGTGCTGCCACACCGACGCATACAGATAATGT
CTGTGCGGTGTTTGATCAGCGGGGGGGCTGGTTCAATAACTGGTACAAATACGCCAAGAACACGGAAAAAGAGTACGGGG
TGCCGGTGCCCGTGCTGATGGCAACGATCTACAAAGAGTCGGGGTTTAATGCTAGAGCGAAACCGCCGCGCACCAAGCTA
CTGGGTTTTATCCCCTGGAAACGCCCGTCGTCGGCCTATGGCTATCCTCAGGCGCTGGACGGCACTTGGAATTGGTACAA
AGACGCCACCGGTCGCCGTGGCGTAAAGCGCAATGATTTCAAGGATGCGGTGCGATTTGTCGGCTGGTATCACTACCAGA
GTTACAAGAAAAATGGCGTGGCCCGTAACGATACCTACAACCTTTATCTGAACTACTACGCCGGCCACGGCGGCTATGCC
CGCGGCACCTGGAAAAACAACAAATGGATGAAAGGCGCCGCCCAGCGCACCGCCTCCATGGCGAACCGATATGAGCAACA
AATGCAGGGCTGTGGAAGGTAA

Upstream 100 bases:

>100_bases
GCTCCAAACTGGCGAAAGCGGAATCGTTGGGCATTGAGGTATGCGATGAAGCTGCGCTACTGTCCCTATTGAACCAGCAC
GGTATTGATCCGGGAGCGTT

Downstream 100 bases:

>100_bases
TAGCGACAAGTGATGGGTTTGGAATGGTAGGAAAACTCCCTGCCTTATGACGGGGTTTGATTTGAATGGTGCTTGATTGT
TACTTGTCGCGGTAAGCTAG

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulatory Protein; Lytic Transglycosylase Catalytic; Soluble Lytic Murein Transglycosylase; Glycoside Hydroylase Family; Lytic Murein Transglycosylase; Glycoside Hydrolase Family Protein; Transmembrane Protein; Transglycosylase SLT Domain; Conserved Secreted Protein; Lytic Transglycosylase; Transcriptional Regulator Protein

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MKVWLTLLLVVLFLSGCAATPTHTDNVCAVFDQRGGWFNNWYKYAKNTEKEYGVPVPVLMATIYKESGFNARAKPPRTKL
LGFIPWKRPSSAYGYPQALDGTWNWYKDATGRRGVKRNDFKDAVRFVGWYHYQSYKKNGVARNDTYNLYLNYYAGHGGYA
RGTWKNNKWMKGAAQRTASMANRYEQQMQGCGR

Sequences:

>Translated_193_residues
MKVWLTLLLVVLFLSGCAATPTHTDNVCAVFDQRGGWFNNWYKYAKNTEKEYGVPVPVLMATIYKESGFNARAKPPRTKL
LGFIPWKRPSSAYGYPQALDGTWNWYKDATGRRGVKRNDFKDAVRFVGWYHYQSYKKNGVARNDTYNLYLNYYAGHGGYA
RGTWKNNKWMKGAAQRTASMANRYEQQMQGCGR
>Mature_193_residues
MKVWLTLLLVVLFLSGCAATPTHTDNVCAVFDQRGGWFNNWYKYAKNTEKEYGVPVPVLMATIYKESGFNARAKPPRTKL
LGFIPWKRPSSAYGYPQALDGTWNWYKDATGRRGVKRNDFKDAVRFVGWYHYQSYKKNGVARNDTYNLYLNYYAGHGGYA
RGTWKNNKWMKGAAQRTASMANRYEQQMQGCGR

Specific function: Unknown

COG id: COG4764

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22260; Mature: 22260

Theoretical pI: Translated: 10.32; Mature: 10.32

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVWLTLLLVVLFLSGCAATPTHTDNVCAVFDQRGGWFNNWYKYAKNTEKEYGVPVPVLM
CHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCHHCCCCHHHHH
ATIYKESGFNARAKPPRTKLLGFIPWKRPSSAYGYPQALDGTWNWYKDATGRRGVKRNDF
HHHHHHCCCCCCCCCCHHHEEEECCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCH
KDAVRFVGWYHYQSYKKNGVARNDTYNLYLNYYAGHGGYARGTWKNNKWMKGAAQRTASM
HHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHH
ANRYEQQMQGCGR
HHHHHHHHHCCCC
>Mature Secondary Structure
MKVWLTLLLVVLFLSGCAATPTHTDNVCAVFDQRGGWFNNWYKYAKNTEKEYGVPVPVLM
CHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCHHCCCCHHHHH
ATIYKESGFNARAKPPRTKLLGFIPWKRPSSAYGYPQALDGTWNWYKDATGRRGVKRNDF
HHHHHHCCCCCCCCCCHHHEEEECCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCH
KDAVRFVGWYHYQSYKKNGVARNDTYNLYLNYYAGHGGYARGTWKNNKWMKGAAQRTASM
HHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHH
ANRYEQQMQGCGR
HHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA