| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is zipA [H]
Identifier: 110833809
GI number: 110833809
Start: 1066643
End: 1067563
Strand: Direct
Name: zipA [H]
Synonym: ABO_0948
Alternate gene names: 110833809
Gene position: 1066643-1067563 (Clockwise)
Preceding gene: 110833808
Following gene: 110833810
Centisome position: 34.19
GC content: 57.87
Gene sequence:
>921_bases ATGGGCCTGAACTTAGAAACATTGATTGGCATTCTGGTTATTTTGATCCTGCTGATTCTCGTCGACGGTATGCGGCGGAT GATCAGAGAGCGGCATGGGCGCCTGCGTATGCGCATTGACCCCCGTTACCGTGACCAACCGGAAGAAGAGGAAGACCGCG GCCATAACCCAGAGCTAATCGGCTCTGCTCGCGTGATCCGTCGTGCTATGGAAGAGGATCAAAAGGAACGCCCACCCATG GTAATGGAGCCGGATGAAGCGGCCGCAGATACCCGTACGGCTGAACAGCAAAGCCTGTTCGAAGCCGAGCAAGGATCGGC GCCTCAACCGGGGGGGGCGCCCGAGCCCCAGCCAGAGGTTGCCCCGGCCCCTAACCCGTCGGCAGTAGAGCGACAGCCAG AATCGACTCCCGAACCTCGTGAGGCGCCTCGCCAAGAGCCACGGATAGAGCCTAAGGCCGCACCGAAAACGCCCCGCGAG CCTCAGCCCGTGCTGGAAGTGATCGTGGTACACCTGATTGCCCACCGTGGTGCGCCTTTTGACGGTGGCGCTTTACTGCG CATGCTGTTGGAAGCGGGGTTGCGTTATGGTCGCATGAATATTTTCCATCGCCATGTAAGTGTGAACGGTGCCGATGATT TGCAATTTTCCATGGCCAATGCGGTTGAGCCCGGCACTTTTGATTTGGATACCATGGAGAGCAAGACGTTTGCCGGGGTG ACATTCTTCCTGAAACTGCCGGGGCCTACTGATGCCAGGAGCGCATTGGACAAGATGCTGTCTATTTGCCAACGGCTGGC TTCGGAACTGGATGGTGAACTCAAAGATGAACAGCACAGCGTATTGACCCCGCAGACCATGGAACACCTACGTCAGCGCG TGCAAGAATTCGAACGGCGCCAACGGGTGCCGAGCGTGTAA
Upstream 100 bases:
>100_bases GTATCAGTGGATGTGGAAGAAGCGGCCGAAATGGCGGCAATGTGAGGAGTCGGTGCCGTTGTAATAGCGGTGCTTCAGCA CAAGCAAGGAAGAAGAGGCG
Downstream 100 bases:
>100_bases AAGCAGTTGAACGTTTAACGTTGAAAAGCAAAAGCCAAGCCCTATCTTGGCGCTTTAGGGGGCGTGCAGCGTAGATTGTC GGATCTCAATGGTACTTGTA
Product: cell division protein ZipA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 306; Mature: 305
Protein sequence:
>306_residues MGLNLETLIGILVILILLILVDGMRRMIRERHGRLRMRIDPRYRDQPEEEEDRGHNPELIGSARVIRRAMEEDQKERPPM VMEPDEAAADTRTAEQQSLFEAEQGSAPQPGGAPEPQPEVAPAPNPSAVERQPESTPEPREAPRQEPRIEPKAAPKTPRE PQPVLEVIVVHLIAHRGAPFDGGALLRMLLEAGLRYGRMNIFHRHVSVNGADDLQFSMANAVEPGTFDLDTMESKTFAGV TFFLKLPGPTDARSALDKMLSICQRLASELDGELKDEQHSVLTPQTMEHLRQRVQEFERRQRVPSV
Sequences:
>Translated_306_residues MGLNLETLIGILVILILLILVDGMRRMIRERHGRLRMRIDPRYRDQPEEEEDRGHNPELIGSARVIRRAMEEDQKERPPM VMEPDEAAADTRTAEQQSLFEAEQGSAPQPGGAPEPQPEVAPAPNPSAVERQPESTPEPREAPRQEPRIEPKAAPKTPRE PQPVLEVIVVHLIAHRGAPFDGGALLRMLLEAGLRYGRMNIFHRHVSVNGADDLQFSMANAVEPGTFDLDTMESKTFAGV TFFLKLPGPTDARSALDKMLSICQRLASELDGELKDEQHSVLTPQTMEHLRQRVQEFERRQRVPSV >Mature_305_residues GLNLETLIGILVILILLILVDGMRRMIRERHGRLRMRIDPRYRDQPEEEEDRGHNPELIGSARVIRRAMEEDQKERPPMV MEPDEAAADTRTAEQQSLFEAEQGSAPQPGGAPEPQPEVAPAPNPSAVERQPESTPEPREAPRQEPRIEPKAAPKTPREP QPVLEVIVVHLIAHRGAPFDGGALLRMLLEAGLRYGRMNIFHRHVSVNGADDLQFSMANAVEPGTFDLDTMESKTFAGVT FFLKLPGPTDARSALDKMLSICQRLASELDGELKDEQHSVLTPQTMEHLRQRVQEFERRQRVPSV
Specific function: Interacts directly with the cell division protein FtsZ. Probable receptor for the septal ring structure, may anchor it to the inner-membrane [H]
COG id: COG3115
COG function: function code D; Cell division protein
Gene ontology:
Cell location: Cell inner membrane; Single-pass type I membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ZipA family [H]
Homologues:
Organism=Escherichia coli, GI1788752, Length=189, Percent_Identity=37.037037037037, Blast_Score=112, Evalue=3e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011919 - InterPro: IPR007449 - ProDom: PD035754 [H]
Pfam domain/function: PF04354 ZipA_C [H]
EC number: NA
Molecular weight: Translated: 34406; Mature: 34275
Theoretical pI: Translated: 5.19; Mature: 5.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLNLETLIGILVILILLILVDGMRRMIRERHGRLRMRIDPRYRDQPEEEEDRGHNPELI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCHHHCCCCCHHH GSARVIRRAMEEDQKERPPMVMEPDEAAADTRTAEQQSLFEAEQGSAPQPGGAPEPQPEV HHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC APAPNPSAVERQPESTPEPREAPRQEPRIEPKAAPKTPREPQPVLEVIVVHLIAHRGAPF CCCCCCHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC DGGALLRMLLEAGLRYGRMNIFHRHVSVNGADDLQFSMANAVEPGTFDLDTMESKTFAGV CHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHCCCCCCCCHHHHCCCHHEEE TFFLKLPGPTDARSALDKMLSICQRLASELDGELKDEQHSVLTPQTMEHLRQRVQEFERR EEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCHHHHHHHHHHHHHHHHH QRVPSV HCCCCC >Mature Secondary Structure GLNLETLIGILVILILLILVDGMRRMIRERHGRLRMRIDPRYRDQPEEEEDRGHNPELI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCHHHCCCCCHHH GSARVIRRAMEEDQKERPPMVMEPDEAAADTRTAEQQSLFEAEQGSAPQPGGAPEPQPEV HHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC APAPNPSAVERQPESTPEPREAPRQEPRIEPKAAPKTPREPQPVLEVIVVHLIAHRGAPF CCCCCCHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC DGGALLRMLLEAGLRYGRMNIFHRHVSVNGADDLQFSMANAVEPGTFDLDTMESKTFAGV CHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHCCCCCCCCHHHHCCCHHEEE TFFLKLPGPTDARSALDKMLSICQRLASELDGELKDEQHSVLTPQTMEHLRQRVQEFERR EEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCHHHHHHHHHHHHHHHHH QRVPSV HCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA