Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

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The map label for this gene is 110833801

Identifier: 110833801

GI number: 110833801

Start: 1053836

End: 1054681

Strand: Direct

Name: 110833801

Synonym: ABO_0940

Alternate gene names: NA

Gene position: 1053836-1054681 (Clockwise)

Preceding gene: 110833800

Following gene: 110833806

Centisome position: 33.78

GC content: 45.27

Gene sequence:

>846_bases
TTGATTATCAAATACAGGGTTGTTCACCGAGTCTCTATAAAAGAGGCGCTGGTCATTTATTCGAGATTTTTTTTTAGGAA
GCTTGAAGACCTGTTTGCTAGCCCAGTGATAACTGACAAGAAAGCACTGTTGGTGGCAGGTTGTGGCCATAGTGGCACGA
CCCTGCTTGCTGCGAAGCTGGGCAATCATCCTAATATTTTTGCAGTGGGAAGAGAAACAGAGTTTCTTCTGCCGGATAAA
AATTCGCTTGTTACGGCTTCAAAGTTGTTGTCCGAATGGGTTTATTGCGCAGAATATCTTGGCAAGGAATATGTTCTCGA
AAAGACACCGAAGCATATTTATTTTATCGACCGTGCAGGGGTTATTGCGCCTAACCATAAAGTTTTGGTGACAATCAGAA
ACCCTTTAGACAATGTGGCATCGTTATTCAAACGTTTTGGTGACCTTGATCTGGCCATTGAGAGATGGGTTAACGATAAT
CACATCGTCGCTGGAATCGCAGGTTCTGGTAATGTCTATGTTGTTCGCTATGAAGACCTGACTGCGGCCCCTGAAGCGAC
CTTTATTTCCTTGTTTGAATTTATTGGCGACAGTTTTGATCCGTCAATACTGGAGGAAGGAAAAACGGCGTATGACTCTG
CCGTGTTAAAGGGGAATATGGTGGTTCGCAGGGATCAGGTTAAGTCCAGAATCCGGGTTAATAATGGGGCTTGGCGAAAA
GTTCTTGATGAAGAGCAGGCTCTTTATGTCTGGAGGCGGGTGTCGGTTGTTGCGCAAGCCCTAGGGTATCACGGCCTTGA
AGATTGCTACTTTCCGACAGATGATGAGAGTAACGGGTGTTCCTGA

Upstream 100 bases:

>100_bases
TGGAATCTGGTGCTGGCTTACTTCGTGATTAAACAGGTAAAGGTAAGCCCCTTTCCTATTTAGTTTTATCCTGAAGGCTG
AAGGAATACGCGGAGGTTTT

Downstream 100 bases:

>100_bases
CACCCGAGATATTTGTATTATCGGGCGTTCGAAGATTGAGCGGGAACAGGAAAGTGGATTCCCAAGAAAAGGGCAAGTTT
GGGAAATCGACTTCTTAATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MIIKYRVVHRVSIKEALVIYSRFFFRKLEDLFASPVITDKKALLVAGCGHSGTTLLAAKLGNHPNIFAVGRETEFLLPDK
NSLVTASKLLSEWVYCAEYLGKEYVLEKTPKHIYFIDRAGVIAPNHKVLVTIRNPLDNVASLFKRFGDLDLAIERWVNDN
HIVAGIAGSGNVYVVRYEDLTAAPEATFISLFEFIGDSFDPSILEEGKTAYDSAVLKGNMVVRRDQVKSRIRVNNGAWRK
VLDEEQALYVWRRVSVVAQALGYHGLEDCYFPTDDESNGCS

Sequences:

>Translated_281_residues
MIIKYRVVHRVSIKEALVIYSRFFFRKLEDLFASPVITDKKALLVAGCGHSGTTLLAAKLGNHPNIFAVGRETEFLLPDK
NSLVTASKLLSEWVYCAEYLGKEYVLEKTPKHIYFIDRAGVIAPNHKVLVTIRNPLDNVASLFKRFGDLDLAIERWVNDN
HIVAGIAGSGNVYVVRYEDLTAAPEATFISLFEFIGDSFDPSILEEGKTAYDSAVLKGNMVVRRDQVKSRIRVNNGAWRK
VLDEEQALYVWRRVSVVAQALGYHGLEDCYFPTDDESNGCS
>Mature_281_residues
MIIKYRVVHRVSIKEALVIYSRFFFRKLEDLFASPVITDKKALLVAGCGHSGTTLLAAKLGNHPNIFAVGRETEFLLPDK
NSLVTASKLLSEWVYCAEYLGKEYVLEKTPKHIYFIDRAGVIAPNHKVLVTIRNPLDNVASLFKRFGDLDLAIERWVNDN
HIVAGIAGSGNVYVVRYEDLTAAPEATFISLFEFIGDSFDPSILEEGKTAYDSAVLKGNMVVRRDQVKSRIRVNNGAWRK
VLDEEQALYVWRRVSVVAQALGYHGLEDCYFPTDDESNGCS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31566; Mature: 31566

Theoretical pI: Translated: 7.18; Mature: 7.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIKYRVVHRVSIKEALVIYSRFFFRKLEDLFASPVITDKKALLVAGCGHSGTTLLAAKL
CEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCEEEEEEC
GNHPNIFAVGRETEFLLPDKNSLVTASKLLSEWVYCAEYLGKEYVLEKTPKHIYFIDRAG
CCCCCEEEECCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHCCCCEEEEEECCC
VIAPNHKVLVTIRNPLDNVASLFKRFGDLDLAIERWVNDNHIVAGIAGSGNVYVVRYEDL
EECCCCEEEEEECCCHHHHHHHHHHHCCHHHHHHHHCCCCEEEEEEECCCCEEEEEECCC
TAAPEATFISLFEFIGDSFDPSILEEGKTAYDSAVLKGNMVVRRDQVKSRIRVNNGAWRK
CCCCCHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHCCCEEEEHHHHHHHEEECCCHHHH
VLDEEQALYVWRRVSVVAQALGYHGLEDCYFPTDDESNGCS
HHCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MIIKYRVVHRVSIKEALVIYSRFFFRKLEDLFASPVITDKKALLVAGCGHSGTTLLAAKL
CEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCEEEEEEC
GNHPNIFAVGRETEFLLPDKNSLVTASKLLSEWVYCAEYLGKEYVLEKTPKHIYFIDRAG
CCCCCEEEECCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHCCCCEEEEEECCC
VIAPNHKVLVTIRNPLDNVASLFKRFGDLDLAIERWVNDNHIVAGIAGSGNVYVVRYEDL
EECCCCEEEEEECCCHHHHHHHHHHHCCHHHHHHHHCCCCEEEEEEECCCCEEEEEECCC
TAAPEATFISLFEFIGDSFDPSILEEGKTAYDSAVLKGNMVVRRDQVKSRIRVNNGAWRK
CCCCCHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHCCCEEEEHHHHHHHEEECCCHHHH
VLDEEQALYVWRRVSVVAQALGYHGLEDCYFPTDDESNGCS
HHCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA