Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

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The map label for this gene is yeeO [C]

Identifier: 110833800

GI number: 110833800

Start: 1052518

End: 1053798

Strand: Direct

Name: yeeO [C]

Synonym: ABO_0939

Alternate gene names: 110833800

Gene position: 1052518-1053798 (Clockwise)

Preceding gene: 110833799

Following gene: 110833801

Centisome position: 33.73

GC content: 46.21

Gene sequence:

>1281_bases
ATGCTCAAATCAGTTTTATATAAAAACTTCTTATCTGTAGGTGGGATGCGTCTTGCGGGGATTCCCCTGACATTGGCAAC
CAGTGTGTTGTTGGCCAGGCTGCTTGGACCAGAGGGATACGGTTACTACTCTTTTGCGATGGCATTGGTTCCTTTGCTTG
CGATTCCTGTGTCCAGTGGTTTGCAGCAGTTTGCGACACGGCAAGTAGTTAGCTATCGGTTGGCCGAACAATTTTCTCTG
GCAAGGGGACTGGTGTCTCTGGCAGGGATGTGGATATTGCTTTATTCCGTTCTTGTGTTTGTTTTTTTTCTGGTCGCTAG
TCAGCTTTTTCCTGAGATCTTTGAAGAAAAAAAATGGGCTATCATGCTCATTGCCATCTTTATTATCCCCTTTATTGGTG
GTAACTCAGTGCGATGTGGTATGTCCAAGGCTCTGGGGCAGCCTTTTTGGTCCGAGCTGCCACTAAGACTGATCCAACCC
GCTCTGCTTCTTGGGATAGTTGTTCTGCTTTATCTCTGGGGGATTAAGGGTGCAAACTTCGCCATTTATGCTCAGCTAAT
AAGTTTCTCTTTGGCATTTATCATTGCAGTAATAATCTTTGTACTTGTAGCGCCTGCGGATATGCGGGAGGGCAATAGGA
CTTATGAAATAGGCTTCTGGGCGCGCTCTCTGATTCCATTTAGCCTTTTATCTGCGGTTACATTGCTCGGAGCGCAAATT
TCCATTGTACTTCTAGGGATTCTCGGTGAACCTGAAGCCGTAGCTGGAATGAGGGTGGCTGACCGTGGTGCCGCGCTTGT
GCTTCTTCCATTGACCACAGTTAACATGATTGTCGCACCGTATATTGCTCGTTATTTCAAGCAAGGTGACCGAGAAAAAC
TGCAAGCTACCTTAAGACTGTCTTCCAGGTTGGCACTTTTGTTTGCATTACCTGCGGCGAGTCTGTTTCTCTTTTTTGGT
GAGCAGATAGTCGGCCTTGTTTTTGGTCTTGAATATATTGCGTACGCATTTTGGCCACTAGTGATTCTTTCTGCGAGCCA
ATTGTTCAGTGTTTTTTGTGGTTCGGTTGGCAATGTGTTGGCAATGAGTCATCAGGAAAATAGGGCCGTTACCGGTCATA
TTCTGGCATTGAGCGTCAATGTGATTCTGTGCTTTTTTTTGATTCCGACGTATGGTGCTGTGGGAGCTGCATTGGCTACT
GGAGCAGGATTGATCGTCTGGAATCTGGTGCTGGCTTACTTCGTGATTAAACAGGTAAAGGTAAGCCCCTTTCCTATTTA
G

Upstream 100 bases:

>100_bases
CCTGAAGGGTATGGCGAGAGATAGGGAGCTATCGCTGACTGAATGAGTGCTTTCCAAGCTTCTGTTTTACGGTTCTATAT
AAAGAGAGTGGGTTGGGAAC

Downstream 100 bases:

>100_bases
TTTTATCCTGAAGGCTGAAGGAATACGCGGAGGTTTTTTGATTATCAAATACAGGGTTGTTCACCGAGTCTCTATAAAAG
AGGCGCTGGTCATTTATTCG

Product: cell surface polysaccharide transporter

Products: NA

Alternate protein names: Polysaccharide Export Protein Translocase; Cell Surface Polysaccharide Transporter

Number of amino acids: Translated: 426; Mature: 426

Protein sequence:

>426_residues
MLKSVLYKNFLSVGGMRLAGIPLTLATSVLLARLLGPEGYGYYSFAMALVPLLAIPVSSGLQQFATRQVVSYRLAEQFSL
ARGLVSLAGMWILLYSVLVFVFFLVASQLFPEIFEEKKWAIMLIAIFIIPFIGGNSVRCGMSKALGQPFWSELPLRLIQP
ALLLGIVVLLYLWGIKGANFAIYAQLISFSLAFIIAVIIFVLVAPADMREGNRTYEIGFWARSLIPFSLLSAVTLLGAQI
SIVLLGILGEPEAVAGMRVADRGAALVLLPLTTVNMIVAPYIARYFKQGDREKLQATLRLSSRLALLFALPAASLFLFFG
EQIVGLVFGLEYIAYAFWPLVILSASQLFSVFCGSVGNVLAMSHQENRAVTGHILALSVNVILCFFLIPTYGAVGAALAT
GAGLIVWNLVLAYFVIKQVKVSPFPI

Sequences:

>Translated_426_residues
MLKSVLYKNFLSVGGMRLAGIPLTLATSVLLARLLGPEGYGYYSFAMALVPLLAIPVSSGLQQFATRQVVSYRLAEQFSL
ARGLVSLAGMWILLYSVLVFVFFLVASQLFPEIFEEKKWAIMLIAIFIIPFIGGNSVRCGMSKALGQPFWSELPLRLIQP
ALLLGIVVLLYLWGIKGANFAIYAQLISFSLAFIIAVIIFVLVAPADMREGNRTYEIGFWARSLIPFSLLSAVTLLGAQI
SIVLLGILGEPEAVAGMRVADRGAALVLLPLTTVNMIVAPYIARYFKQGDREKLQATLRLSSRLALLFALPAASLFLFFG
EQIVGLVFGLEYIAYAFWPLVILSASQLFSVFCGSVGNVLAMSHQENRAVTGHILALSVNVILCFFLIPTYGAVGAALAT
GAGLIVWNLVLAYFVIKQVKVSPFPI
>Mature_426_residues
MLKSVLYKNFLSVGGMRLAGIPLTLATSVLLARLLGPEGYGYYSFAMALVPLLAIPVSSGLQQFATRQVVSYRLAEQFSL
ARGLVSLAGMWILLYSVLVFVFFLVASQLFPEIFEEKKWAIMLIAIFIIPFIGGNSVRCGMSKALGQPFWSELPLRLIQP
ALLLGIVVLLYLWGIKGANFAIYAQLISFSLAFIIAVIIFVLVAPADMREGNRTYEIGFWARSLIPFSLLSAVTLLGAQI
SIVLLGILGEPEAVAGMRVADRGAALVLLPLTTVNMIVAPYIARYFKQGDREKLQATLRLSSRLALLFALPAASLFLFFG
EQIVGLVFGLEYIAYAFWPLVILSASQLFSVFCGSVGNVLAMSHQENRAVTGHILALSVNVILCFFLIPTYGAVGAALAT
GAGLIVWNLVLAYFVIKQVKVSPFPI

Specific function: Unknown

COG id: COG2244

COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46332; Mature: 46332

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKSVLYKNFLSVGGMRLAGIPLTLATSVLLARLLGPEGYGYYSFAMALVPLLAIPVSSG
CCHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
LQQFATRQVVSYRLAEQFSLARGLVSLAGMWILLYSVLVFVFFLVASQLFPEIFEEKKWA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
IMLIAIFIIPFIGGNSVRCGMSKALGQPFWSELPLRLIQPALLLGIVVLLYLWGIKGANF
HHHHHHHHHHHCCCCCCCCCHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCH
AIYAQLISFSLAFIIAVIIFVLVAPADMREGNRTYEIGFWARSLIPFSLLSAVTLLGAQI
HHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHH
SIVLLGILGEPEAVAGMRVADRGAALVLLPLTTVNMIVAPYIARYFKQGDREKLQATLRL
HHHHHHHCCCCCHHHCCEEECCCCEEEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
SSRLALLFALPAASLFLFFGEQIVGLVFGLEYIAYAFWPLVILSASQLFSVFCGSVGNVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH
AMSHQENRAVTGHILALSVNVILCFFLIPTYGAVGAALATGAGLIVWNLVLAYFVIKQVK
EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHC
VSPFPI
CCCCCC
>Mature Secondary Structure
MLKSVLYKNFLSVGGMRLAGIPLTLATSVLLARLLGPEGYGYYSFAMALVPLLAIPVSSG
CCHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
LQQFATRQVVSYRLAEQFSLARGLVSLAGMWILLYSVLVFVFFLVASQLFPEIFEEKKWA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
IMLIAIFIIPFIGGNSVRCGMSKALGQPFWSELPLRLIQPALLLGIVVLLYLWGIKGANF
HHHHHHHHHHHCCCCCCCCCHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCH
AIYAQLISFSLAFIIAVIIFVLVAPADMREGNRTYEIGFWARSLIPFSLLSAVTLLGAQI
HHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHH
SIVLLGILGEPEAVAGMRVADRGAALVLLPLTTVNMIVAPYIARYFKQGDREKLQATLRL
HHHHHHHCCCCCHHHCCEEECCCCEEEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
SSRLALLFALPAASLFLFFGEQIVGLVFGLEYIAYAFWPLVILSASQLFSVFCGSVGNVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH
AMSHQENRAVTGHILALSVNVILCFFLIPTYGAVGAALATGAGLIVWNLVLAYFVIKQVK
EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHC
VSPFPI
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA