Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

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The map label for this gene is 110833757

Identifier: 110833757

GI number: 110833757

Start: 995668

End: 997038

Strand: Direct

Name: 110833757

Synonym: ABO_0896

Alternate gene names: NA

Gene position: 995668-997038 (Clockwise)

Preceding gene: 110833756

Following gene: 110833758

Centisome position: 31.91

GC content: 52.01

Gene sequence:

>1371_bases
ATGGCAGGCATCGGTTTTGAGCTGCGCCGTCTGTTGCGTAAGGACACCTTGCTCGGGCTCATTCGTGCCTACGCCTATGC
CGGAGTGATCAGCTCAGGTCCCTGGGTGTTATCGATCATCGGTATCCTGATTATCGGTATTTTCAGCCTGGGGATCGTGA
TACCCAATGCGGCGGTGACGCAATTTCAGGTCACGGTCACCTATTTGATTGCGGTCAGTTTGACCCTCACCGGTATTGTC
CAGCTGGCGTTTACTCGTTTCTGTGCCGACCGCTCGTTTGAAAAGCGCGAAGACCTGATTCTGCCTAATTTTGGCGGCGT
TACCTTGCTGGTCACGATCTTTGCTGGGCTACTGTCGTTACCGGTGGCCATGTTCCTGTTTCCGGAGCAAAGCATTCTTT
TCCGAGTGTTGTTGATCGCCTGTTTTGTAGTGTTGTGCAATATCTGGATCGCCACGGTATTCCTGTCTGGCATGAAGCAG
TACAAGGCTATTCTTCTGCTGTACGCACTCGGGTACGGGATTACGGTTGTAGCGGCGCTATTGCTGCTGTTTCTGGGGCT
GGAAGGGTTGTTGTTGGGCTTTCTGCTTGGGCAAGTCACCTTATTGGCAGGCATGCTGGTGCTGATCGTGCGGGGCTACC
CTGCCGAGAGCGTGGTGTCGTTCGCCATGTTCAGTAAAAAATACCTGTACCCCTCCTTGATGCTGGTCGGCTTTTTCTAC
AACGCCGGTGTGTGGGCCGACAAGGCCATGTTCTGGTTCTACGATGGCACCGGAAGCGATGTGATCGGGCCGCTTCGGGC
TTCGTTAATCTACGATATCCCGGTATTCCTGTCGTATCTGTCGCTTATTCCTGGCATGGCAGTGTTTCTGGTGCGCATGG
AAACGGACTTTGTGGAGTATTACTCCAACTTCTACGATGCAGTTCGTGAAGGCGGCTCGCTGTCTTATATTGAAGATATG
CGCAATCGAATGGTCTTTGTGATTCGCCAGGGGATCTTCCAGATTCTCAAGATTCAGGCTATCTCGGCGCTGGTAATTAT
GGTTGCCGGTGCGCAGATCTTTCATGCGCTGGGCATTTCGGAATTGTACCTACCGTTGCTCAAAGTGCAGTTGATTGCTA
CCGCACTACAGGTGGTATTCCTCGCCATCATCAACGTGTTCTGCTACCTGGATCAGCGCCGCATGCTGGTGCTGCTGACC
GGGTTGTTCTTCGTGCTTAATGTGATTTTTACTGGAATTAGCCTGTACCTAGGCCCTCAGTTTTTCGGTTTTGGTTTCTT
GCTGGCCTTGGCTGTCTGTGTGTTGCTTGGCTTGTGGTTGGTCAGCCGCAAAATGGCAGAGCTGGAATATTCCACCTTCA
TGCTTAATTGA

Upstream 100 bases:

>100_bases
CCCAGGAAATGATGTTTGGCGCTTATCGGGATTTATACCGTTCTTTGCTTGATGATTCAGGCATTGCGGCCTCGGCCAGT
AATAAGGAGGGCCGCCACTA

Downstream 100 bases:

>100_bases
CAGGTGGTGTGTCGGATTGCCTCTTCTCTCACGGAGAAAGAACACACTGCCTTTCAGGCTTAACGTGGTTGTTGCCGTCG
GCAAGGCCGGGAAGTCGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: Inner Membrane Protein; Polysaccharide Synthase Transmembrane Protein; Transmembrane Protein Cog

Number of amino acids: Translated: 456; Mature: 455

Protein sequence:

>456_residues
MAGIGFELRRLLRKDTLLGLIRAYAYAGVISSGPWVLSIIGILIIGIFSLGIVIPNAAVTQFQVTVTYLIAVSLTLTGIV
QLAFTRFCADRSFEKREDLILPNFGGVTLLVTIFAGLLSLPVAMFLFPEQSILFRVLLIACFVVLCNIWIATVFLSGMKQ
YKAILLLYALGYGITVVAALLLLFLGLEGLLLGFLLGQVTLLAGMLVLIVRGYPAESVVSFAMFSKKYLYPSLMLVGFFY
NAGVWADKAMFWFYDGTGSDVIGPLRASLIYDIPVFLSYLSLIPGMAVFLVRMETDFVEYYSNFYDAVREGGSLSYIEDM
RNRMVFVIRQGIFQILKIQAISALVIMVAGAQIFHALGISELYLPLLKVQLIATALQVVFLAIINVFCYLDQRRMLVLLT
GLFFVLNVIFTGISLYLGPQFFGFGFLLALAVCVLLGLWLVSRKMAELEYSTFMLN

Sequences:

>Translated_456_residues
MAGIGFELRRLLRKDTLLGLIRAYAYAGVISSGPWVLSIIGILIIGIFSLGIVIPNAAVTQFQVTVTYLIAVSLTLTGIV
QLAFTRFCADRSFEKREDLILPNFGGVTLLVTIFAGLLSLPVAMFLFPEQSILFRVLLIACFVVLCNIWIATVFLSGMKQ
YKAILLLYALGYGITVVAALLLLFLGLEGLLLGFLLGQVTLLAGMLVLIVRGYPAESVVSFAMFSKKYLYPSLMLVGFFY
NAGVWADKAMFWFYDGTGSDVIGPLRASLIYDIPVFLSYLSLIPGMAVFLVRMETDFVEYYSNFYDAVREGGSLSYIEDM
RNRMVFVIRQGIFQILKIQAISALVIMVAGAQIFHALGISELYLPLLKVQLIATALQVVFLAIINVFCYLDQRRMLVLLT
GLFFVLNVIFTGISLYLGPQFFGFGFLLALAVCVLLGLWLVSRKMAELEYSTFMLN
>Mature_455_residues
AGIGFELRRLLRKDTLLGLIRAYAYAGVISSGPWVLSIIGILIIGIFSLGIVIPNAAVTQFQVTVTYLIAVSLTLTGIVQ
LAFTRFCADRSFEKREDLILPNFGGVTLLVTIFAGLLSLPVAMFLFPEQSILFRVLLIACFVVLCNIWIATVFLSGMKQY
KAILLLYALGYGITVVAALLLLFLGLEGLLLGFLLGQVTLLAGMLVLIVRGYPAESVVSFAMFSKKYLYPSLMLVGFFYN
AGVWADKAMFWFYDGTGSDVIGPLRASLIYDIPVFLSYLSLIPGMAVFLVRMETDFVEYYSNFYDAVREGGSLSYIEDMR
NRMVFVIRQGIFQILKIQAISALVIMVAGAQIFHALGISELYLPLLKVQLIATALQVVFLAIINVFCYLDQRRMLVLLTG
LFFVLNVIFTGISLYLGPQFFGFGFLLALAVCVLLGLWLVSRKMAELEYSTFMLN

Specific function: Unknown

COG id: COG4267

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50576; Mature: 50445

Theoretical pI: Translated: 8.60; Mature: 8.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AGIGFELRRLLRKDTLLGLIRAYAYAGVISSGPWVLSIIGILIIGIFSLGIVIPNAAVT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHH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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA