| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is 110833756
Identifier: 110833756
GI number: 110833756
Start: 994112
End: 995668
Strand: Direct
Name: 110833756
Synonym: ABO_0895
Alternate gene names: NA
Gene position: 994112-995668 (Clockwise)
Preceding gene: 110833755
Following gene: 110833757
Centisome position: 31.86
GC content: 53.44
Gene sequence:
>1557_bases ATGAGCCTGCCACGGGCGGATAGCGCCGATATTTGTCTATTACTGGAAGGCACCTTCCCCTACGTGAGTGGTGGTGTGTC CAGCTGGGTAAACCAGATTATTCGTGGTTTTCCCGAGTACACCTTTGCCTGTTGTTTTGTAGGCAGCCGCCCGGAAGACT ACGGCGAGATGAAATACGAACTGCCCGACAACGTGGTGCACCTTGAAGTGCACTACCTGCACAATTTTCAGCGGGGGGCG CAAAAACGCTCCCTCAAGGGTAATCGCAAAGCTTATGCCGATTTGCGGCGTTTTCACGACATGGTGAAAGAGGGCGTCCA GACCCGCGAACGCAGCCAATTGTTCAGCCGCATTGTGACTCATCTGGGCGAAGGCGAGGATTATTCCGAAGAGTCGTTCC TGCACAGCCGGGCCAGCTGGGATTATATCGCCGAAGCGTACCGGAACTTTAGCCGTGACCCGTCATTTGTGGATTACTTC TGGACCATCCGTATTATGCACTCGCCCATCTGGGTGCTGAACGACATTGCCGATAATTTAATTCCGGCGAAAATGTACCA CACCATTTCGACCGGTTATGCCGGCTTTCTAGGGGCCATGCTAAAGCGCCGCACCAACAAGCCTTTATTGTTGTCCGAGC ACGGTATTTACACCAAAGAGCGCAAAATCGATCTATTCCAGAGTGAATGGATCAGCGATAACCGTGGCTTGGTGGAAAAG AATAACTCGGAGATGGCCTATTTTCGGGAGAAATGGGTGAATTTCTTCACCGAGTTAGGGCGTGAGTGTTATCAGGCATC AGACCGGATCGTGGCTCTTTATGAACGAAACCGGGAACGGCAGATGGAAGATGGCGCCCCCCCGGACCGCACACTGAATA TCCCTAATGGCATCGACTTGCCACGTATGCAGAAAGTGCGCGCCGCCCGTGGTGAAGCCATTCCCCCGGTGGCTTGCCTG ATTGGCCGTGTGGTTCCCATTAAAGATGTGAAAACCTTCCTGCGCGCCATGCGCACCTTGGTCAATGTGATTCCCGAAGC GGAAGGCTGGATTGCCGGGCCGGAAGATGAAGATAAAGATTACGCCAAGGAATGCCGTGGCTTGGTGGCCAGCCTGGGGC TGGAAAAAAATGTGAAGTTTTTGGGCTTTCAGAAAATTGATGAATTGCTCCCTAAGGTGGGGGTGATCGTGCTCAGTTCC ATCAGTGAGGCATTACCTTTGGTGCTGCTGGAAGGGTTTGCTGCCGGCGTGCCGGCGGTATCCACGGATGTGGGGTCTTG CCGCCAGTTGATCGAAGGCCTTGATGAAGATGATCGTGCCTACGGTAAAGCTGGCGAGGTGGTGGGCATTGCCGACCCAG AAGCGCTGGGTAACGCCGTGGCTCAGTTATTGAAAGACAAAGACGCGTGGTTTCAAGCACAGCAGGCGGGTATTCGTCGG GTTGAAAACCTGTATACCCAGGAAATGATGTTTGGCGCTTATCGGGATTTATACCGTTCTTTGCTTGATGATTCAGGCAT TGCGGCCTCGGCCAGTAATAAGGAGGGCCGCCACTAA
Upstream 100 bases:
>100_bases CAGCGCCGGCAAATGTCGCTGGTACGTATGTTGATGCTGGAAATCACCGATGACAGCCAGTTTACCCAGCTGAATAAATC CGTTGAATTCTGGAGGGCCT
Downstream 100 bases:
>100_bases TGGCAGGCATCGGTTTTGAGCTGCGCCGTCTGTTGCGTAAGGACACCTTGCTCGGGCTCATTCGTGCCTACGCCTATGCC GGAGTGATCAGCTCAGGTCC
Product: hypothetical protein
Products: NA
Alternate protein names: Stealth protein SCO2592 [H]
Number of amino acids: Translated: 518; Mature: 517
Protein sequence:
>518_residues MSLPRADSADICLLLEGTFPYVSGGVSSWVNQIIRGFPEYTFACCFVGSRPEDYGEMKYELPDNVVHLEVHYLHNFQRGA QKRSLKGNRKAYADLRRFHDMVKEGVQTRERSQLFSRIVTHLGEGEDYSEESFLHSRASWDYIAEAYRNFSRDPSFVDYF WTIRIMHSPIWVLNDIADNLIPAKMYHTISTGYAGFLGAMLKRRTNKPLLLSEHGIYTKERKIDLFQSEWISDNRGLVEK NNSEMAYFREKWVNFFTELGRECYQASDRIVALYERNRERQMEDGAPPDRTLNIPNGIDLPRMQKVRAARGEAIPPVACL IGRVVPIKDVKTFLRAMRTLVNVIPEAEGWIAGPEDEDKDYAKECRGLVASLGLEKNVKFLGFQKIDELLPKVGVIVLSS ISEALPLVLLEGFAAGVPAVSTDVGSCRQLIEGLDEDDRAYGKAGEVVGIADPEALGNAVAQLLKDKDAWFQAQQAGIRR VENLYTQEMMFGAYRDLYRSLLDDSGIAASASNKEGRH
Sequences:
>Translated_518_residues MSLPRADSADICLLLEGTFPYVSGGVSSWVNQIIRGFPEYTFACCFVGSRPEDYGEMKYELPDNVVHLEVHYLHNFQRGA QKRSLKGNRKAYADLRRFHDMVKEGVQTRERSQLFSRIVTHLGEGEDYSEESFLHSRASWDYIAEAYRNFSRDPSFVDYF WTIRIMHSPIWVLNDIADNLIPAKMYHTISTGYAGFLGAMLKRRTNKPLLLSEHGIYTKERKIDLFQSEWISDNRGLVEK NNSEMAYFREKWVNFFTELGRECYQASDRIVALYERNRERQMEDGAPPDRTLNIPNGIDLPRMQKVRAARGEAIPPVACL IGRVVPIKDVKTFLRAMRTLVNVIPEAEGWIAGPEDEDKDYAKECRGLVASLGLEKNVKFLGFQKIDELLPKVGVIVLSS ISEALPLVLLEGFAAGVPAVSTDVGSCRQLIEGLDEDDRAYGKAGEVVGIADPEALGNAVAQLLKDKDAWFQAQQAGIRR VENLYTQEMMFGAYRDLYRSLLDDSGIAASASNKEGRH >Mature_517_residues SLPRADSADICLLLEGTFPYVSGGVSSWVNQIIRGFPEYTFACCFVGSRPEDYGEMKYELPDNVVHLEVHYLHNFQRGAQ KRSLKGNRKAYADLRRFHDMVKEGVQTRERSQLFSRIVTHLGEGEDYSEESFLHSRASWDYIAEAYRNFSRDPSFVDYFW TIRIMHSPIWVLNDIADNLIPAKMYHTISTGYAGFLGAMLKRRTNKPLLLSEHGIYTKERKIDLFQSEWISDNRGLVEKN NSEMAYFREKWVNFFTELGRECYQASDRIVALYERNRERQMEDGAPPDRTLNIPNGIDLPRMQKVRAARGEAIPPVACLI GRVVPIKDVKTFLRAMRTLVNVIPEAEGWIAGPEDEDKDYAKECRGLVASLGLEKNVKFLGFQKIDELLPKVGVIVLSSI SEALPLVLLEGFAAGVPAVSTDVGSCRQLIEGLDEDDRAYGKAGEVVGIADPEALGNAVAQLLKDKDAWFQAQQAGIRRV ENLYTQEMMFGAYRDLYRSLLDDSGIAASASNKEGRH
Specific function: Unknown
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the stealth family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 [H]
Pfam domain/function: PF00534 Glycos_transf_1 [H]
EC number: NA
Molecular weight: Translated: 58620; Mature: 58489
Theoretical pI: Translated: 5.89; Mature: 5.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLPRADSADICLLLEGTFPYVSGGVSSWVNQIIRGFPEYTFACCFVGSRPEDYGEMKYE CCCCCCCCCCEEEEEECCCCHHCCCHHHHHHHHHHHCCCHHEEEEEECCCCCCCCCEEEC LPDNVVHLEVHYLHNFQRGAQKRSLKGNRKAYADLRRFHDMVKEGVQTRERSQLFSRIVT CCCCEEEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HLGEGEDYSEESFLHSRASWDYIAEAYRNFSRDPSFVDYFWTIRIMHSPIWVLNDIADNL HCCCCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHC IPAKMYHTISTGYAGFLGAMLKRRTNKPLLLSEHGIYTKERKIDLFQSEWISDNRGLVEK CHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCC NNSEMAYFREKWVNFFTELGRECYQASDRIVALYERNRERQMEDGAPPDRTLNIPNGIDL CCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHCHHHHHHCCCCCCCEECCCCCCCC PRMQKVRAARGEAIPPVACLIGRVVPIKDVKTFLRAMRTLVNVIPEAEGWIAGPEDEDKD HHHHHHHHHCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH YAKECRGLVASLGLEKNVKFLGFQKIDELLPKVGVIVLSSISEALPLVLLEGFAAGVPAV HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH STDVGSCRQLIEGLDEDDRAYGKAGEVVGIADPEALGNAVAQLLKDKDAWFQAQQAGIRR HCCHHHHHHHHHCCCCHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH VENLYTQEMMFGAYRDLYRSLLDDSGIAASASNKEGRH HHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCC >Mature Secondary Structure SLPRADSADICLLLEGTFPYVSGGVSSWVNQIIRGFPEYTFACCFVGSRPEDYGEMKYE CCCCCCCCCEEEEEECCCCHHCCCHHHHHHHHHHHCCCHHEEEEEECCCCCCCCCEEEC LPDNVVHLEVHYLHNFQRGAQKRSLKGNRKAYADLRRFHDMVKEGVQTRERSQLFSRIVT CCCCEEEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HLGEGEDYSEESFLHSRASWDYIAEAYRNFSRDPSFVDYFWTIRIMHSPIWVLNDIADNL HCCCCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHC IPAKMYHTISTGYAGFLGAMLKRRTNKPLLLSEHGIYTKERKIDLFQSEWISDNRGLVEK CHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCC NNSEMAYFREKWVNFFTELGRECYQASDRIVALYERNRERQMEDGAPPDRTLNIPNGIDL CCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHCHHHHHHCCCCCCCEECCCCCCCC PRMQKVRAARGEAIPPVACLIGRVVPIKDVKTFLRAMRTLVNVIPEAEGWIAGPEDEDKD HHHHHHHHHCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH YAKECRGLVASLGLEKNVKFLGFQKIDELLPKVGVIVLSSISEALPLVLLEGFAAGVPAV HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH STDVGSCRQLIEGLDEDDRAYGKAGEVVGIADPEALGNAVAQLLKDKDAWFQAQQAGIRR HCCHHHHHHHHHCCCCHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH VENLYTQEMMFGAYRDLYRSLLDDSGIAASASNKEGRH HHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12000953 [H]