Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

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The map label for this gene is 110833717

Identifier: 110833717

GI number: 110833717

Start: 954431

End: 955768

Strand: Direct

Name: 110833717

Synonym: ABO_0856

Alternate gene names: NA

Gene position: 954431-955768 (Clockwise)

Preceding gene: 110833716

Following gene: 110833718

Centisome position: 30.59

GC content: 57.25

Gene sequence:

>1338_bases
ATGGGCAGTAAGAAACATCCTTCGGCGTTGTGGGCTATCTGGCTGTTTGGTTCGGTCGGCTTGGCCATTTGGTTGAGTCT
TCAATTAGTGGATGAAGACGCAGCAAAGACCGCTTTTATCCCTGGCCCAATGACCCACGGCCATCACCAGATCGAGATGC
AATGCAGTGTTTGTCATGGCCCTGGCTTCGACAGCGAAACCGTATTGCAAAATGCCTGTATTGATTGTCATGGGGAGCAA
TTGGAAGACGCCCAAGATTCTCATCCCAAATCCAAATTTACTGACCCTCGTAATGCCGACCGGCTGGCCAATGTGGATGC
CCGGCTTTGCGTGTCCTGCCATGTGGAGCATCGTCCCGAACTTGACGTCGGCTTGGGGGTGACTCTGCCCATGGACATGT
GCGGCCACTGTCATGAAGGCATTGCCGAAGATCGGCCGAGTCATGAGGGAATGGGTTTCGATACTTGTGCGAATGCGGGT
TGTCATAATTTCCACGATAACCGCGCGTTGTATGAAGACTTTCTGCTTGCCCATTCCGATGAGCCTTGGCTGAAGCCGCC
TGCCCGGCAACCGCCCCGTAACCTGCTTGCCAGACAGATGAAAGATGACGCTCTGCTGGCGTTGATGCGCGGCCAGGGCA
AAGCGCCTGAAGGCACGCCAACCCCTGAGCACTGGGAGGGGACGGCCCATGCACAAGCGGGCGTCACCTGCACCGCTTGC
CATGGTGCTGCCGGTGAGTGGGTCGATTCACCGGAGATGCTGCAGTGCGCCACCTGCCATAAGCCGGAGTCAGAAGGGTT
TCTGCAGGGCCGGCATGGCATGCGCTTGGCCCAAGGGCTGGCGCCGATGACGCCGTCGCAGTCTGTGCTCAACATGCATG
TGGAGGCCAGTCATCGCGAGCTGACGTGTATCAGCTGTCACGGCGCCCATGACTTTGATACCCAGAGTGCTGCCGTGGAT
AGCTGTATTGGCTGCCACAATGACGAGCACAGCAACGAATACCTGCGTTCCCCTCATCATGACCTGTGGAAAAAGGAAAA
GCGCGGCGAGTTGCCGCCCGGTAGCGGTGTCACCTGTGCCTCCTGCCACATGCCCCGTGAAGAGCATCGCGACGACATTT
TTGTCCAGCACAACCAGAGCCTGACCATGCGCCCGGTGGAAAAGATGGTGCGTCCGGTATGCCTGCAATGCCATAGCTTG
GCGTTTTCACTGGATGCCTTAGCCGATCCGCATCTGCTGGAAAACAACTTCAACGGCAAGCCCGAACACCATGTACCGTC
CATCGATATGGCGGTGGACCGTGACGAGGCCCGCGACAAAAAAATAGGGCCTTACTGA

Upstream 100 bases:

>100_bases
AGGCAGCACTTGGCTGCACATTCTGGTGTGCTGGCCGCTGCCGACGCTACTGATCTTTCACATCGTTTCGGCGTACTACT
TCTAAAGGGCGGGTGCGGTG

Downstream 100 bases:

>100_bases
TTTACGCATAACGAAGTTTAAAAACCTGAGGAGGTATTACCCATGCGACACGTCATGAAACGCAAAGCCACCACCCTGAT
GGCCACGGCCATTTCCGCCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 445; Mature: 444

Protein sequence:

>445_residues
MGSKKHPSALWAIWLFGSVGLAIWLSLQLVDEDAAKTAFIPGPMTHGHHQIEMQCSVCHGPGFDSETVLQNACIDCHGEQ
LEDAQDSHPKSKFTDPRNADRLANVDARLCVSCHVEHRPELDVGLGVTLPMDMCGHCHEGIAEDRPSHEGMGFDTCANAG
CHNFHDNRALYEDFLLAHSDEPWLKPPARQPPRNLLARQMKDDALLALMRGQGKAPEGTPTPEHWEGTAHAQAGVTCTAC
HGAAGEWVDSPEMLQCATCHKPESEGFLQGRHGMRLAQGLAPMTPSQSVLNMHVEASHRELTCISCHGAHDFDTQSAAVD
SCIGCHNDEHSNEYLRSPHHDLWKKEKRGELPPGSGVTCASCHMPREEHRDDIFVQHNQSLTMRPVEKMVRPVCLQCHSL
AFSLDALADPHLLENNFNGKPEHHVPSIDMAVDRDEARDKKIGPY

Sequences:

>Translated_445_residues
MGSKKHPSALWAIWLFGSVGLAIWLSLQLVDEDAAKTAFIPGPMTHGHHQIEMQCSVCHGPGFDSETVLQNACIDCHGEQ
LEDAQDSHPKSKFTDPRNADRLANVDARLCVSCHVEHRPELDVGLGVTLPMDMCGHCHEGIAEDRPSHEGMGFDTCANAG
CHNFHDNRALYEDFLLAHSDEPWLKPPARQPPRNLLARQMKDDALLALMRGQGKAPEGTPTPEHWEGTAHAQAGVTCTAC
HGAAGEWVDSPEMLQCATCHKPESEGFLQGRHGMRLAQGLAPMTPSQSVLNMHVEASHRELTCISCHGAHDFDTQSAAVD
SCIGCHNDEHSNEYLRSPHHDLWKKEKRGELPPGSGVTCASCHMPREEHRDDIFVQHNQSLTMRPVEKMVRPVCLQCHSL
AFSLDALADPHLLENNFNGKPEHHVPSIDMAVDRDEARDKKIGPY
>Mature_444_residues
GSKKHPSALWAIWLFGSVGLAIWLSLQLVDEDAAKTAFIPGPMTHGHHQIEMQCSVCHGPGFDSETVLQNACIDCHGEQL
EDAQDSHPKSKFTDPRNADRLANVDARLCVSCHVEHRPELDVGLGVTLPMDMCGHCHEGIAEDRPSHEGMGFDTCANAGC
HNFHDNRALYEDFLLAHSDEPWLKPPARQPPRNLLARQMKDDALLALMRGQGKAPEGTPTPEHWEGTAHAQAGVTCTACH
GAAGEWVDSPEMLQCATCHKPESEGFLQGRHGMRLAQGLAPMTPSQSVLNMHVEASHRELTCISCHGAHDFDTQSAAVDS
CIGCHNDEHSNEYLRSPHHDLWKKEKRGELPPGSGVTCASCHMPREEHRDDIFVQHNQSLTMRPVEKMVRPVCLQCHSLA
FSLDALADPHLLENNFNGKPEHHVPSIDMAVDRDEARDKKIGPY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49099; Mature: 48967

Theoretical pI: Translated: 6.07; Mature: 6.07

Prosite motif: PS51008 MULTIHEME_CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.9 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
8.5 %Cys+Met (Translated Protein)
5.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
8.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSKKHPSALWAIWLFGSVGLAIWLSLQLVDEDAAKTAFIPGPMTHGHHQIEMQCSVCHG
CCCCCCCHHHHHHHHHHHHHHHHHEEEEEECCCCCCEEECCCCCCCCCEEEEEEEEEECC
PGFDSETVLQNACIDCHGEQLEDAQDSHPKSKFTDPRNADRLANVDARLCVSCHVEHRPE
CCCCHHHHHHHHHHCCCCHHHHHHHHCCCCHHCCCCCCCHHHHCCCCEEEEEECCCCCCC
LDVGLGVTLPMDMCGHCHEGIAEDRPSHEGMGFDTCANAGCHNFHDNRALYEDFLLAHSD
CCCCCCCEECHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHCCC
EPWLKPPARQPPRNLLARQMKDDALLALMRGQGKAPEGTPTPEHWEGTAHAQAGVTCTAC
CCCCCCCCCCCHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEC
HGAAGEWVDSPEMLQCATCHKPESEGFLQGRHGMRLAQGLAPMTPSQSVLNMHVEASHRE
CCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCCHHHHEEEEECCCCE
LTCISCHGAHDFDTQSAAVDSCIGCHNDEHSNEYLRSPHHDLWKKEKRGELPPGSGVTCA
EEEEEECCCCCCCCHHHHHHHHHCCCCCCCCHHHHHCCCHHHHHHHHCCCCCCCCCCEEH
SCHMPREEHRDDIFVQHNQSLTMRPVEKMVRPVCLQCHSLAFSLDALADPHLLENNFNGK
HCCCCHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCC
PEHHVPSIDMAVDRDEARDKKIGPY
CCCCCCCCCEEECCHHHCCCCCCCC
>Mature Secondary Structure 
GSKKHPSALWAIWLFGSVGLAIWLSLQLVDEDAAKTAFIPGPMTHGHHQIEMQCSVCHG
CCCCCCHHHHHHHHHHHHHHHHHEEEEEECCCCCCEEECCCCCCCCCEEEEEEEEEECC
PGFDSETVLQNACIDCHGEQLEDAQDSHPKSKFTDPRNADRLANVDARLCVSCHVEHRPE
CCCCHHHHHHHHHHCCCCHHHHHHHHCCCCHHCCCCCCCHHHHCCCCEEEEEECCCCCCC
LDVGLGVTLPMDMCGHCHEGIAEDRPSHEGMGFDTCANAGCHNFHDNRALYEDFLLAHSD
CCCCCCCEECHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHCCC
EPWLKPPARQPPRNLLARQMKDDALLALMRGQGKAPEGTPTPEHWEGTAHAQAGVTCTAC
CCCCCCCCCCCHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEC
HGAAGEWVDSPEMLQCATCHKPESEGFLQGRHGMRLAQGLAPMTPSQSVLNMHVEASHRE
CCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCCHHHHEEEEECCCCE
LTCISCHGAHDFDTQSAAVDSCIGCHNDEHSNEYLRSPHHDLWKKEKRGELPPGSGVTCA
EEEEEECCCCCCCCHHHHHHHHHCCCCCCCCHHHHHCCCHHHHHHHHCCCCCCCCCCEEH
SCHMPREEHRDDIFVQHNQSLTMRPVEKMVRPVCLQCHSLAFSLDALADPHLLENNFNGK
HCCCCHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCC
PEHHVPSIDMAVDRDEARDKKIGPY
CCCCCCCCCEEECCHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA