| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is 110833707
Identifier: 110833707
GI number: 110833707
Start: 942139
End: 943236
Strand: Direct
Name: 110833707
Synonym: ABO_0846
Alternate gene names: NA
Gene position: 942139-943236 (Clockwise)
Preceding gene: 110833706
Following gene: 110833708
Centisome position: 30.2
GC content: 57.83
Gene sequence:
>1098_bases GTGGCCCCAGGGTCACGCGATCCTTTGCTGCCACGGGGAACCCGCAGAGTTATAGTACGTCGAAGACGCAATCCCCCGCC CTTCGATGGAGTTCTCCCGTTGCCGCTGACGCTACAAACGCTGACTGAAAAACTGTATCGGATCCGACATATCTGGGCGT TTATCAGTTTTTCGTTGGGCCTGAGTAGTTATTTCCTAGTGGATCGCCAACCCTGGCTGGCGGCGGTACTCACCGGGCTG TTGGTGTTGAGCTGGCTATTACTGCTTACCGAAGGAATCTGGCAGAACAAATTCATCGGAACCCGTTTTGATGGCTTGCC CCAGGGCATGCTCAAATTGTTATTGCAGGCAGTGCATCAAGAGGCATTCTTTTTCAGCTTGCCATTCGTGTTGCTGCAAT GGTCCGGTGGCGCGGAATATATTTTCTTCACCACCCTGGTGGTCAGTGCGGCCTTGGCCAGTATTATTGATCCGGTCTAT TTTTGGCTGGCCCGGCATCGGGCGCTGTATTTCGGCTTCCACGCCTGGGCGTTGTTTGTGGCCCTGCTAGTGCTGTTGCC GCTAATCTTTCACTGGAGTACCGACTCGGCCCTGGCGTGGGCAGGCTGGCTCACCGCCCTGTTTGCCTTGCCCAGCTTCT GGCGGTTTGGCGGGCCACGAAAGTGGTTTCGCTGGCTGGGGCTGATACTGATCTCGTGCCTAATTGCGCTGGCCCCGCGC TGGCTAGCCCCGCTGGTGCCACCGCTAACGTTGTCTTTGCAGGAGCGCGCCGTCGCTTTGTCATTCAATCGCGCCGAGCG CAAGCCGCTGGTGAGTGGCGAAGTTTTTAGCGCAAACGAAGTGGCCGAAGGGCTGTATGCCTACACCGCCATCAAGGCGC CATTGGGGCTCGGGCAGGAGGTGTACCACTACTGGTTCCGCAACGGCGAACAGGTGGACCGCATTCCATTGAAAGTCTCT GGCGGGCGGGAATCGGGCTTTCGCACCTGGTCCCACAAACGCCACATTCCTGTGCCGTCACAGGGGCACTGGCGGGTAGA AGTGCGTACCGGGGATAACCAGATCATCGGCGTGATGCGGTTTACTATCACACCCTGA
Upstream 100 bases:
>100_bases TCTGATGCACGCCATGGGCCCTAACGTGGCTGGAGTTATCGGCTCTGCTGTGGCCGCCGGCGTGCTGCTCAACTTTGCCG GCTGATCGATTTTCCCCGCG
Downstream 100 bases:
>100_bases TTCCTGCGGCTCCCCAGTCGCCCCTTCGCCCCCAAGCCCCTCAACACCCCAACCCGCGTTGGCGCCTTGCTCGCAAGGCG AAGAGGCTGACGTCACTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 365; Mature: 364
Protein sequence:
>365_residues MAPGSRDPLLPRGTRRVIVRRRRNPPPFDGVLPLPLTLQTLTEKLYRIRHIWAFISFSLGLSSYFLVDRQPWLAAVLTGL LVLSWLLLLTEGIWQNKFIGTRFDGLPQGMLKLLLQAVHQEAFFFSLPFVLLQWSGGAEYIFFTTLVVSAALASIIDPVY FWLARHRALYFGFHAWALFVALLVLLPLIFHWSTDSALAWAGWLTALFALPSFWRFGGPRKWFRWLGLILISCLIALAPR WLAPLVPPLTLSLQERAVALSFNRAERKPLVSGEVFSANEVAEGLYAYTAIKAPLGLGQEVYHYWFRNGEQVDRIPLKVS GGRESGFRTWSHKRHIPVPSQGHWRVEVRTGDNQIIGVMRFTITP
Sequences:
>Translated_365_residues MAPGSRDPLLPRGTRRVIVRRRRNPPPFDGVLPLPLTLQTLTEKLYRIRHIWAFISFSLGLSSYFLVDRQPWLAAVLTGL LVLSWLLLLTEGIWQNKFIGTRFDGLPQGMLKLLLQAVHQEAFFFSLPFVLLQWSGGAEYIFFTTLVVSAALASIIDPVY FWLARHRALYFGFHAWALFVALLVLLPLIFHWSTDSALAWAGWLTALFALPSFWRFGGPRKWFRWLGLILISCLIALAPR WLAPLVPPLTLSLQERAVALSFNRAERKPLVSGEVFSANEVAEGLYAYTAIKAPLGLGQEVYHYWFRNGEQVDRIPLKVS GGRESGFRTWSHKRHIPVPSQGHWRVEVRTGDNQIIGVMRFTITP >Mature_364_residues APGSRDPLLPRGTRRVIVRRRRNPPPFDGVLPLPLTLQTLTEKLYRIRHIWAFISFSLGLSSYFLVDRQPWLAAVLTGLL VLSWLLLLTEGIWQNKFIGTRFDGLPQGMLKLLLQAVHQEAFFFSLPFVLLQWSGGAEYIFFTTLVVSAALASIIDPVYF WLARHRALYFGFHAWALFVALLVLLPLIFHWSTDSALAWAGWLTALFALPSFWRFGGPRKWFRWLGLILISCLIALAPRW LAPLVPPLTLSLQERAVALSFNRAERKPLVSGEVFSANEVAEGLYAYTAIKAPLGLGQEVYHYWFRNGEQVDRIPLKVSG GRESGFRTWSHKRHIPVPSQGHWRVEVRTGDNQIIGVMRFTITP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41584; Mature: 41453
Theoretical pI: Translated: 11.03; Mature: 11.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPGSRDPLLPRGTRRVIVRRRRNPPPFDGVLPLPLTLQTLTEKLYRIRHIWAFISFSLG CCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHC LSSYFLVDRQPWLAAVLTGLLVLSWLLLLTEGIWQNKFIGTRFDGLPQGMLKLLLQAVHQ CCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH EAFFFSLPFVLLQWSGGAEYIFFTTLVVSAALASIIDPVYFWLARHRALYFGFHAWALFV HHHHHHCCHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALLVLLPLIFHWSTDSALAWAGWLTALFALPSFWRFGGPRKWFRWLGLILISCLIALAPR HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH WLAPLVPPLTLSLQERAVALSFNRAERKPLVSGEVFSANEVAEGLYAYTAIKAPLGLGQE HHHHCCCCCCHHHHHHHHEEEECHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHH VYHYWFRNGEQVDRIPLKVSGGRESGFRTWSHKRHIPVPSQGHWRVEVRTGDNQIIGVMR HHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEEE FTITP EEECC >Mature Secondary Structure APGSRDPLLPRGTRRVIVRRRRNPPPFDGVLPLPLTLQTLTEKLYRIRHIWAFISFSLG CCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHC LSSYFLVDRQPWLAAVLTGLLVLSWLLLLTEGIWQNKFIGTRFDGLPQGMLKLLLQAVHQ CCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH EAFFFSLPFVLLQWSGGAEYIFFTTLVVSAALASIIDPVYFWLARHRALYFGFHAWALFV HHHHHHCCHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALLVLLPLIFHWSTDSALAWAGWLTALFALPSFWRFGGPRKWFRWLGLILISCLIALAPR HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH WLAPLVPPLTLSLQERAVALSFNRAERKPLVSGEVFSANEVAEGLYAYTAIKAPLGLGQE HHHHCCCCCCHHHHHHHHEEEECHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHH VYHYWFRNGEQVDRIPLKVSGGRESGFRTWSHKRHIPVPSQGHWRVEVRTGDNQIIGVMR HHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEEE FTITP EEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA