| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is 110833702
Identifier: 110833702
GI number: 110833702
Start: 936343
End: 937068
Strand: Direct
Name: 110833702
Synonym: ABO_0841
Alternate gene names: NA
Gene position: 936343-937068 (Clockwise)
Preceding gene: 110833701
Following gene: 110833703
Centisome position: 30.01
GC content: 51.1
Gene sequence:
>726_bases ATGGCTAAAGCAAAGAAAGCCGCCGCAAAAAAAACTGCGGCACGTAGGCCCGCAGCAAAAAAAGCTGCTGCAGTAAAAGC ACCGGCTCTTCCTAAATCTGTTACCAACGCTGAGGCCAAGGTTAAGCTACAAGGTAAAGCCGTTGCTCAGGCAGAAAAGA AAGTTACCCAGTCACAAACTAAACTAGATAAACATCGCGCCAAGATCGACGCTGAAAATGCCAAGCTGTCGAAGCTGCGT GCTGATGTTGCTGCCAAGCGTGAAAAAGCACAAAAAACTCCTACTGCAGCCGCTAAGCGTGCTGTTGATACCGCTCGTGG CCGTATGAATACCGGACGCTTGAAACTTCAGGATATTCGTGCTGAAGCAAAACTGATTCGCGCCGAGATCCAGGCCGCGA AGAAAGTTGTCGCCCGCGAAGTGAAAAAAATGCGCACAGCTGAGCGTAATCTGAAAGCGAAGTTACGTGATCACGAACGT AAACTGGCGAAGAAAGCTAAAGCAGAACAGAAGAAGATTGAACAAAAGGCGAAAGTGGCAGCTCGTAAAGCGGCAGCCAA AGCCAAGCGTGTTGCCAAGAAGGCAGCGCCAAGCAAGCCTAAGAAGGCGCCTGCCAAAAAAGCGGTGGCCAGTAAACCTG CGGCAAAGAAAACAACCCCTCGTAAAGCCCCTGCTAAGAAGGCGGCAGCTAAGCGTGCTCCGGCCAAGAAGGCTGCGTCT TCCTGA
Upstream 100 bases:
>100_bases AAATTGAGTTGGTTAAATAATGTACCAACCGATTTTCTTTTATGCTATTTTCCATTTGTCGCAGTAATTGATGACAATGC CATAGCTTAGGAGATCAATC
Downstream 100 bases:
>100_bases TACGTTAGCGAGCTTTATAGAGTCCAAAAGCCCCGCACTGCGGGGCTTTTTTATGCCTGCGAATATTGCCTAGCCGGGAA GGGAGCAGGGTGGGCTCAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 241; Mature: 240
Protein sequence:
>241_residues MAKAKKAAAKKTAARRPAAKKAAAVKAPALPKSVTNAEAKVKLQGKAVAQAEKKVTQSQTKLDKHRAKIDAENAKLSKLR ADVAAKREKAQKTPTAAAKRAVDTARGRMNTGRLKLQDIRAEAKLIRAEIQAAKKVVAREVKKMRTAERNLKAKLRDHER KLAKKAKAEQKKIEQKAKVAARKAAAKAKRVAKKAAPSKPKKAPAKKAVASKPAAKKTTPRKAPAKKAAAKRAPAKKAAS S
Sequences:
>Translated_241_residues MAKAKKAAAKKTAARRPAAKKAAAVKAPALPKSVTNAEAKVKLQGKAVAQAEKKVTQSQTKLDKHRAKIDAENAKLSKLR ADVAAKREKAQKTPTAAAKRAVDTARGRMNTGRLKLQDIRAEAKLIRAEIQAAKKVVAREVKKMRTAERNLKAKLRDHER KLAKKAKAEQKKIEQKAKVAARKAAAKAKRVAKKAAPSKPKKAPAKKAVASKPAAKKTTPRKAPAKKAAAKRAPAKKAAS S >Mature_240_residues AKAKKAAAKKTAARRPAAKKAAAVKAPALPKSVTNAEAKVKLQGKAVAQAEKKVTQSQTKLDKHRAKIDAENAKLSKLRA DVAAKREKAQKTPTAAAKRAVDTARGRMNTGRLKLQDIRAEAKLIRAEIQAAKKVVAREVKKMRTAERNLKAKLRDHERK LAKKAKAEQKKIEQKAKVAARKAAAKAKRVAKKAAPSKPKKAPAKKAVASKPAAKKTTPRKAPAKKAAAKRAPAKKAASS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25787; Mature: 25656
Theoretical pI: Translated: 12.04; Mature: 12.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKAKKAAAKKTAARRPAAKKAAAVKAPALPKSVTNAEAKVKLQGKAVAQAEKKVTQSQT CCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCCHHCCCCCEEEECHHHHHHHHHHHHHHHH KLDKHRAKIDAENAKLSKLRADVAAKREKAQKTPTAAAKRAVDTARGRMNTGRLKLQDIR HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHH AEAKLIRAEIQAAKKVVAREVKKMRTAERNLKAKLRDHERKLAKKAKAEQKKIEQKAKVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARKAAAKAKRVAKKAAPSKPKKAPAKKAVASKPAAKKTTPRKAPAKKAAAKRAPAKKAAS HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCHHCCC S C >Mature Secondary Structure AKAKKAAAKKTAARRPAAKKAAAVKAPALPKSVTNAEAKVKLQGKAVAQAEKKVTQSQT CCHHHHHHHHHHHHCCHHHHHHHHCCCCCCCHHCCCCCEEEECHHHHHHHHHHHHHHHH KLDKHRAKIDAENAKLSKLRADVAAKREKAQKTPTAAAKRAVDTARGRMNTGRLKLQDIR HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHH AEAKLIRAEIQAAKKVVAREVKKMRTAERNLKAKLRDHERKLAKKAKAEQKKIEQKAKVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARKAAAKAKRVAKKAAPSKPKKAPAKKAVASKPAAKKTTPRKAPAKKAAAKRAPAKKAAS HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCHHCCC S C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA