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The map label for this gene is yrdA [C]

Identifier: 110833653

GI number: 110833653

Start: 886446

End: 886982

Strand: Direct

Name: yrdA [C]

Synonym: ABO_0792

Alternate gene names: 110833653

Gene position: 886446-886982 (Clockwise)

Preceding gene: 110833652

Following gene: 110833654

Centisome position: 28.41

GC content: 52.14

Gene sequence:

>537_bases
ATGATTTATAAGATTGGTGAGCGTCGCTTAGAGCAACGTGGTGATGGCCACTGGATAGCGGATAACGCCACCGTCATCGG
CTCGGTGATCATGGAAGCCAACAGCAGTATTTGGTTCAACGCGGTGCTGCGAGCGGATAACGATGTCATAGAAATTGGTG
AGAATACCAATATTCAGGACGGTGCTGTATTGCACGTGGACCCGGGTGTGCCCATGAAACTGGGCAAGGATGTGACGGTG
GGGCACAAAGTCATGTTGCATGGCTGTACGGTGGGTAATAACAGCCTGATCGGTATCAATGCGGTGGTGCTCAACAAAGC
GGTCATTGGCAATAACTGTATCATTGGCGCGAACTCCCTCGTGCCGGAAGGCATGAAAATTCCCGACAACTCCTTGGTTA
TGGGGTCACCTGCCAAGGTAGTGAAAGAAATTGGTGAGGGGCATAAGGCTATGTTGACCATGGGCAGCATGCACTATGTG
GCCCACGCGAAAGAGTTTGCTCAGCACCTGGAGGTGGACGAGCGGTTCCATGACTGA

Upstream 100 bases:

>100_bases
GCCTTCATGATTCTGGACTTGATTAACCATGTTTATGACGCAGGCATTGAGTTCGAAGTGAAATAACCCGCCGCTGGGTA
TCAGTAAAAAGGGGAAAGGC

Downstream 100 bases:

>100_bases
AAGACAGCTAGTGTCGCCGTGTGTGTCGATTTGCGCATTGGATGAAGATGATATCTGTGTGGGCTGTTTCCGTACCGGTG
GAGAGATTTCCATCTGGGGG

Product: anhydrase family 3 protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 178; Mature: 178

Protein sequence:

>178_residues
MIYKIGERRLEQRGDGHWIADNATVIGSVIMEANSSIWFNAVLRADNDVIEIGENTNIQDGAVLHVDPGVPMKLGKDVTV
GHKVMLHGCTVGNNSLIGINAVVLNKAVIGNNCIIGANSLVPEGMKIPDNSLVMGSPAKVVKEIGEGHKAMLTMGSMHYV
AHAKEFAQHLEVDERFHD

Sequences:

>Translated_178_residues
MIYKIGERRLEQRGDGHWIADNATVIGSVIMEANSSIWFNAVLRADNDVIEIGENTNIQDGAVLHVDPGVPMKLGKDVTV
GHKVMLHGCTVGNNSLIGINAVVLNKAVIGNNCIIGANSLVPEGMKIPDNSLVMGSPAKVVKEIGEGHKAMLTMGSMHYV
AHAKEFAQHLEVDERFHD
>Mature_178_residues
MIYKIGERRLEQRGDGHWIADNATVIGSVIMEANSSIWFNAVLRADNDVIEIGENTNIQDGAVLHVDPGVPMKLGKDVTV
GHKVMLHGCTVGNNSLIGINAVVLNKAVIGNNCIIGANSLVPEGMKIPDNSLVMGSPAKVVKEIGEGHKAMLTMGSMHYV
AHAKEFAQHLEVDERFHD

Specific function: Unknown

COG id: COG0663

COG function: function code R; Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gamma-class carbonic anhydrase family [H]

Homologues:

Organism=Escherichia coli, GI87082240, Length=164, Percent_Identity=40.2439024390244, Blast_Score=125, Evalue=2e-30,
Organism=Escherichia coli, GI1787667, Length=157, Percent_Identity=36.9426751592357, Blast_Score=104, Evalue=3e-24,
Organism=Escherichia coli, GI87081681, Length=129, Percent_Identity=34.1085271317829, Blast_Score=86, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011004 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19200; Mature: 19200

Theoretical pI: Translated: 6.22; Mature: 6.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIYKIGERRLEQRGDGHWIADNATVIGSVIMEANSSIWFNAVLRADNDVIEIGENTNIQD
CEEECCHHHHHHCCCCCEEECCCCEEEHHHHHCCCCEEEEEEEECCCCEEEECCCCCCCC
GAVLHVDPGVPMKLGKDVTVGHKVMLHGCTVGNNSLIGINAVVLNKAVIGNNCIIGANSL
CEEEEECCCCCCCCCCCCCCCCEEEEEEEEECCCCEEEEEEEEEEEEEECCCEEEECCCC
VPEGMKIPDNSLVMGSPAKVVKEIGEGHKAMLTMGSMHYVAHAKEFAQHLEVDERFHD
CCCCCCCCCCCEEECCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCHHHHCCC
>Mature Secondary Structure
MIYKIGERRLEQRGDGHWIADNATVIGSVIMEANSSIWFNAVLRADNDVIEIGENTNIQD
CEEECCHHHHHHCCCCCEEECCCCEEEHHHHHCCCCEEEEEEEECCCCEEEECCCCCCCC
GAVLHVDPGVPMKLGKDVTVGHKVMLHGCTVGNNSLIGINAVVLNKAVIGNNCIIGANSL
CEEEEECCCCCCCCCCCCCCCCEEEEEEEEECCCCEEEEEEEEEEEEEECCCEEEECCCC
VPEGMKIPDNSLVMGSPAKVVKEIGEGHKAMLTMGSMHYVAHAKEFAQHLEVDERFHD
CCCCCCCCCCCEEECCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]